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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1991 1
2000 1
2002 1
2004 2
2006 1
2007 2
2008 2
2009 1
2010 1
2012 1
2013 1
2015 1
2016 1
2017 4
2018 4
2019 4
2020 5
2021 3
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32 results
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Page 1
Best match graphs.
Geiß M, Chávez E, González Laffitte M, López Sánchez A, Stadler BMR, Valdivia DI, Hellmuth M, Hernández Rosales M, Stadler PF. Geiß M, et al. Among authors: hellmuth m. J Math Biol. 2019 Jun;78(7):2015-2057. doi: 10.1007/s00285-019-01332-9. Epub 2019 Apr 9. J Math Biol. 2019. PMID: 30968198 Free PMC article.
Generic Context-Aware Group Contributions.
Flamm C, Hellmuth M, Merkle D, Nojgaard N, Stadler PF. Flamm C, et al. Among authors: hellmuth m. IEEE/ACM Trans Comput Biol Bioinform. 2020 Jun 1;PP. doi: 10.1109/TCBB.2020.2998948. Online ahead of print. IEEE/ACM Trans Comput Biol Bioinform. 2020. PMID: 32750852
Reciprocal best match graphs.
Geiß M, Stadler PF, Hellmuth M. Geiß M, et al. Among authors: hellmuth m. J Math Biol. 2020 Feb;80(3):865-953. doi: 10.1007/s00285-019-01444-2. Epub 2019 Oct 30. J Math Biol. 2020. PMID: 31691135
Reconstruction of time-consistent species trees.
Lafond M, Hellmuth M. Lafond M, et al. Among authors: hellmuth m. Algorithms Mol Biol. 2020 Aug 20;15:16. doi: 10.1186/s13015-020-00175-0. eCollection 2020. Algorithms Mol Biol. 2020. PMID: 32843891 Free PMC article.
From pairs of most similar sequences to phylogenetic best matches.
Stadler PF, Geiß M, Schaller D, López Sánchez A, González Laffitte M, Valdivia DI, Hellmuth M, Hernández Rosales M. Stadler PF, et al. Among authors: hellmuth m. Algorithms Mol Biol. 2020 Apr 9;15:5. doi: 10.1186/s13015-020-00165-2. eCollection 2020. Algorithms Mol Biol. 2020. PMID: 32308731 Free PMC article.
Best match graphs and reconciliation of gene trees with species trees.
Geiß M, Laffitte MEG, Sánchez AL, Valdivia DI, Hellmuth M, Rosales MH, Stadler PF. Geiß M, et al. Among authors: hellmuth m. J Math Biol. 2020 Apr;80(5):1459-1495. doi: 10.1007/s00285-020-01469-y. Epub 2020 Jan 30. J Math Biol. 2020. PMID: 32002659 Free PMC article.
Phylogenomics with paralogs.
Hellmuth M, Wieseke N, Lechner M, Lenhof HP, Middendorf M, Stadler PF. Hellmuth M, et al. Proc Natl Acad Sci U S A. 2015 Feb 17;112(7):2058-63. doi: 10.1073/pnas.1412770112. Epub 2015 Feb 2. Proc Natl Acad Sci U S A. 2015. PMID: 25646426 Free PMC article.
Reconstructing gene trees from Fitch's xenology relation.
Geiß M, Anders J, Stadler PF, Wieseke N, Hellmuth M. Geiß M, et al. Among authors: hellmuth m. J Math Biol. 2018 Nov;77(5):1459-1491. doi: 10.1007/s00285-018-1260-8. Epub 2018 Jun 27. J Math Biol. 2018. PMID: 29951855
On the performance of de novo pathway enrichment.
Batra R, Alcaraz N, Gitzhofer K, Pauling J, Ditzel HJ, Hellmuth M, Baumbach J, List M. Batra R, et al. Among authors: hellmuth m. NPJ Syst Biol Appl. 2017 Mar 3;3:6. doi: 10.1038/s41540-017-0007-2. eCollection 2017. NPJ Syst Biol Appl. 2017. PMID: 28649433 Free PMC article.
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