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Description and functional analysis of the transcriptome from malting barley.

Vinje MA, Henson CA, Duke SH, Simmons CH, Le K, Hall E, Hirsch CD. Vinje MA, et al. Among authors: hirsch cd. Genomics. 2021 Sep;113(5):3310-3324. doi: 10.1016/j.ygeno.2021.07.011. Epub 2021 Jul 15. Genomics. 2021. PMID: 34273497

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Transposable element influences on gene expression in plants.

Hirsch CD, Springer NM. Hirsch CD, et al. Biochim Biophys Acta Gene Regul Mech. 2017 Jan;1860(1):157-165. doi: 10.1016/j.bbagrm.2016.05.010. Epub 2016 May 25. Biochim Biophys Acta Gene Regul Mech. 2017. PMID: 27235540 Review.

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Single-parent expression drives dynamic gene expression complementation in maize hybrids.

Li Z, Zhou P, Della Coletta R, Zhang T, Brohammer AB, H O'Connor C, Vaillancourt B, Lipzen A, Daum C, Barry K, de Leon N, Hirsch CD, Buell CR, Kaeppler SM, Springer NM, Hirsch CN. Li Z, et al. Among authors: hirsch cd. Plant J. 2021 Jan;105(1):93-107. doi: 10.1111/tpj.15042. Epub 2020 Nov 29. Plant J. 2021. PMID: 33098691 Free article.

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Evaluating and Mapping Grape Color Using Image-Based Phenotyping.

Underhill AN, Hirsch CD, Clark MD. Underhill AN, et al. Among authors: hirsch cd. Plant Phenomics. 2020 Apr 24;2020:8086309. doi: 10.34133/2020/8086309. eCollection 2020. Plant Phenomics. 2020. PMID: 33313563 Free PMC article.

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Saccharomyces boulardii reduces the vertical transmission of Toxocara canis larvae in mice.

Cruz LAX, Hirsch CD, de Moura MQ, de Avila LFC, Martins LHR, Klafke GB, Conceição FR, Berne MEA, Scaini CJ. Cruz LAX, et al. Among authors: hirsch cd. J Helminthol. 2021 Mar 2;95:e11. doi: 10.1017/S0022149X20001030. J Helminthol. 2021. PMID: 33650475

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Identification of Candidate Susceptibility Genes to Puccinia graminis f. sp. tritici in Wheat.

Henningsen EC, Omidvar V, Della Coletta R, Michno JM, Gilbert E, Li F, Miller ME, Myers CL, Gordon SP, Vogel JP, Steffenson BJ, Kianian SF, Hirsch CD, Figueroa M. Henningsen EC, et al. Among authors: hirsch cd. Front Plant Sci. 2021 Apr 21;12:657796. doi: 10.3389/fpls.2021.657796. eCollection 2021. Front Plant Sci. 2021. PMID: 33968112 Free PMC article.

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Transposable elements contribute to dynamic genome content in maize.

Anderson SN, Stitzer MC, Brohammer AB, Zhou P, Noshay JM, O'Connor CH, Hirsch CD, Ross-Ibarra J, Hirsch CN, Springer NM. Anderson SN, et al. Among authors: hirsch cd. Plant J. 2019 Dec;100(5):1052-1065. doi: 10.1111/tpj.14489. Epub 2019 Sep 18. Plant J. 2019. PMID: 31381222 Free article.

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Classifying cold-stress responses of inbred maize seedlings using RGB imaging.

Enders TA, St Dennis S, Oakland J, Callen ST, Gehan MA, Miller ND, Spalding EP, Springer NM, Hirsch CD. Enders TA, et al. Among authors: hirsch cd. Plant Direct. 2019 Jan 2;3(1):e00104. doi: 10.1002/pld3.104. eCollection 2019 Jan. Plant Direct. 2019. PMID: 31245751 Free PMC article.

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Hyperspectral imaging and improved feature variable selection for automated determination of deoxynivalenol in various genetic lines of barley kernels for resistance screening.

Su WH, Yang C, Dong Y, Johnson R, Page R, Szinyei T, Hirsch CD, Steffenson BJ. Su WH, et al. Among authors: hirsch cd. Food Chem. 2021 May 1;343:128507. doi: 10.1016/j.foodchem.2020.128507. Epub 2020 Oct 31. Food Chem. 2021. PMID: 33160773

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Dynamic Patterns of Transcript Abundance of Transposable Element Families in Maize.

Anderson SN, Stitzer MC, Zhou P, Ross-Ibarra J, Hirsch CD, Springer NM. Anderson SN, et al. Among authors: hirsch cd. G3 (Bethesda). 2019 Nov 5;9(11):3673-3682. doi: 10.1534/g3.119.400431. G3 (Bethesda). 2019. PMID: 31506319 Free PMC article.

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