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Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1911 1
1913 1
1914 3
1915 1
1921 1
1922 1
1924 1
1925 2
1930 1
1932 1
1933 2
1934 1
1937 1
1939 2
1947 1
1948 2
1951 2
1952 1
1953 1
1954 1
1963 1
1964 1
1965 3
1967 1
1968 7
1969 2
1970 3
1971 2
1972 3
1973 5
1976 5
1977 1
1978 8
1979 8
1980 8
1981 7
1982 10
1983 18
1984 18
1985 17
1986 18
1987 18
1988 13
1989 17
1990 12
1991 20
1992 36
1993 36
1994 26
1995 26
1996 35
1997 19
1998 27
1999 29
2000 31
2001 36
2002 31
2003 33
2004 34
2005 35
2006 48
2007 35
2008 27
2009 24
2010 43
2011 61
2012 54
2013 51
2014 51
2015 58
2016 69
2017 83
2018 74
2019 82
2020 90
2021 99
2022 112
2023 13
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1,596 results
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Page 1
DADA2: High-resolution sample inference from Illumina amplicon data.
Callahan BJ, McMurdie PJ, Rosen MJ, Han AW, Johnson AJ, Holmes SP. Callahan BJ, et al. Among authors: holmes sp. Nat Methods. 2016 Jul;13(7):581-3. doi: 10.1038/nmeth.3869. Epub 2016 May 23. Nat Methods. 2016. PMID: 27214047 Free PMC article.
Reporting guidelines for human microbiome research: the STORMS checklist.
Mirzayi C, Renson A; Genomic Standards Consortium; Massive Analysis and Quality Control Society; Zohra F, Elsafoury S, Geistlinger L, Kasselman LJ, Eckenrode K, van de Wijgert J, Loughman A, Marques FZ, MacIntyre DA, Arumugam M, Azhar R, Beghini F, Bergstrom K, Bhatt A, Bisanz JE, Braun J, Bravo HC, Buck GA, Bushman F, Casero D, Clarke G, Collado MC, Cotter PD, Cryan JF, Demmer RT, Devkota S, Elinav E, Escobar JS, Fettweis J, Finn RD, Fodor AA, Forslund S, Franke A, Furlanello C, Gilbert J, Grice E, Haibe-Kains B, Handley S, Herd P, Holmes S, Jacobs JP, Karstens L, Knight R, Knights D, Koren O, Kwon DS, Langille M, Lindsay B, McGovern D, McHardy AC, McWeeney S, Mueller NT, Nezi L, Olm M, Palm N, Pasolli E, Raes J, Redinbo MR, Rühlemann M, Balfour Sartor R, Schloss PD, Schriml L, Segal E, Shardell M, Sharpton T, Smirnova E, Sokol H, Sonnenburg JL, Srinivasan S, Thingholm LB, Turnbaugh PJ, Upadhyay V, Walls RL, Wilmes P, Yamada T, Zeller G, Zhang M, Zhao N, Zhao L, Bao W, Culhane A, Devanarayan V, Dopazo J, Fan X, Fischer M, Jones W, Kusko R, Mason CE, Mercer TR, Sansone SA, Scherer A, Shi L, Thakkar S, Tong W, Wolfinger R, Hunter C, Segata N, Huttenhower C, Dowd JB, Jones HE, Waldron L. Mirzayi C, et al. Among authors: holmes s. Nat Med. 2021 Nov;27(11):1885-1892. doi: 10.1038/s41591-021-01552-x. Epub 2021 Nov 17. Nat Med. 2021. PMID: 34789871 Free PMC article. Review.
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.
Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG. Bolyen E, et al. Among authors: holmes s. Nat Biotechnol. 2019 Aug;37(8):852-857. doi: 10.1038/s41587-019-0209-9. Nat Biotechnol. 2019. PMID: 31341288 Free PMC article. No abstract available.
Robust variation in infant gut microbiome assembly across a spectrum of lifestyles.
Olm MR, Dahan D, Carter MM, Merrill BD, Yu FB, Jain S, Meng X, Tripathi S, Wastyk H, Neff N, Holmes S, Sonnenburg ED, Jha AR, Sonnenburg JL. Olm MR, et al. Among authors: holmes s. Science. 2022 Jun 10;376(6598):1220-1223. doi: 10.1126/science.abj2972. Epub 2022 Jun 9. Science. 2022. PMID: 35679413
Multi-omic profiling reveals widespread dysregulation of innate immunity and hematopoiesis in COVID-19.
Wilk AJ, Lee MJ, Wei B, Parks B, Pi R, Martínez-Colón GJ, Ranganath T, Zhao NQ, Taylor S, Becker W; Stanford COVID-19 Biobank; Jimenez-Morales D, Blomkalns AL, O'Hara R, Ashley EA, Nadeau KC, Yang S, Holmes S, Rabinovitch M, Rogers AJ, Greenleaf WJ, Blish CA. Wilk AJ, et al. Among authors: holmes s. J Exp Med. 2021 Aug 2;218(8):e20210582. doi: 10.1084/jem.20210582. Epub 2021 Jun 15. J Exp Med. 2021. PMID: 34128959 Free PMC article.
In Response.
Hensley NB, Holmes SD, Metkus TS. Hensley NB, et al. Among authors: holmes sd. Anesth Analg. 2022 Nov 1;135(5):e36-e37. doi: 10.1213/ANE.0000000000006179. Epub 2022 Oct 21. Anesth Analg. 2022. PMID: 36269992 No abstract available.
Cytokine profile in plasma of severe COVID-19 does not differ from ARDS and sepsis.
Wilson JG, Simpson LJ, Ferreira AM, Rustagi A, Roque J, Asuni A, Ranganath T, Grant PM, Subramanian A, Rosenberg-Hasson Y, Maecker HT, Holmes SP, Levitt JE, Blish CA, Rogers AJ. Wilson JG, et al. Among authors: holmes sp. JCI Insight. 2020 Sep 3;5(17):e140289. doi: 10.1172/jci.insight.140289. JCI Insight. 2020. PMID: 32706339 Free PMC article.
The Importance of Self-Management in the Context of Personalized Care in COPD.
Cravo A, Attar D, Freeman D, Holmes S, Ip L, Singh SJ. Cravo A, et al. Among authors: holmes s. Int J Chron Obstruct Pulmon Dis. 2022 Jan 22;17:231-243. doi: 10.2147/COPD.S343108. eCollection 2022. Int J Chron Obstruct Pulmon Dis. 2022. PMID: 35095272 Free PMC article. Review.
1,596 results