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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2004 1
2008 1
2010 1
2011 2
2012 2
2013 1
2014 3
2015 4
2016 4
2017 1
2018 3
2019 2
2020 1
2021 4
2022 1
2023 1

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31 results

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Page 1
Strong pathogen competition in neonatal gut colonisation.
Mäklin T, Thorpe HA, Pöntinen AK, Gladstone RA, Shao Y, Pesonen M, McNally A, Johnsen PJ, Samuelsen Ø, Lawley TD, Honkela A, Corander J. Mäklin T, et al. Among authors: honkela a. Nat Commun. 2022 Dec 1;13(1):7417. doi: 10.1038/s41467-022-35178-5. Nat Commun. 2022. PMID: 36456554 Free PMC article.
Bacterial genomic epidemiology with mixed samples.
Mäklin T, Kallonen T, Alanko J, Samuelsen Ø, Hegstad K, Mäkinen V, Corander J, Heinz E, Honkela A. Mäklin T, et al. Among authors: honkela a. Microb Genom. 2021 Nov;7(11):000691. doi: 10.1099/mgen.0.000691. Microb Genom. 2021. PMID: 34779765 Free PMC article.
Identifying Bacterial Strains from Sequencing Data.
Mäklin T, Corander J, Honkela A. Mäklin T, et al. Among authors: honkela a. Methods Mol Biol. 2018;1807:1-7. doi: 10.1007/978-1-4939-8561-6_1. Methods Mol Biol. 2018. PMID: 30030799
Privacy-preserving data sharing via probabilistic modeling.
Jälkö J, Lagerspetz E, Haukka J, Tarkoma S, Honkela A, Kaski S. Jälkö J, et al. Among authors: honkela a. Patterns (N Y). 2021 Jun 7;2(7):100271. doi: 10.1016/j.patter.2021.100271. eCollection 2021 Jul 9. Patterns (N Y). 2021. PMID: 34286296 Free PMC article.
High-resolution sweep metagenomics using fast probabilistic inference.
Mäklin T, Kallonen T, David S, Boinett CJ, Pascoe B, Méric G, Aanensen DM, Feil EJ, Baker S, Parkhill J, Sheppard SK, Corander J, Honkela A. Mäklin T, et al. Among authors: honkela a. Wellcome Open Res. 2021 Oct 8;5:14. doi: 10.12688/wellcomeopenres.15639.2. eCollection 2020. Wellcome Open Res. 2021. PMID: 34746439 Free PMC article.
Bayesian identification of bacterial strains from sequencing data.
Sankar A, Malone B, Bayliss SC, Pascoe B, Méric G, Hitchings MD, Sheppard SK, Feil EJ, Corander J, Honkela A. Sankar A, et al. Among authors: honkela a. Microb Genom. 2016 Aug 25;2(8):e000075. doi: 10.1099/mgen.0.000075. eCollection 2016 Aug. Microb Genom. 2016. PMID: 28348870 Free PMC article.
Exploration and retrieval of whole-metagenome sequencing samples.
Seth S, Välimäki N, Kaski S, Honkela A. Seth S, et al. Among authors: honkela a. Bioinformatics. 2014 Sep 1;30(17):2471-9. doi: 10.1093/bioinformatics/btu340. Epub 2014 May 19. Bioinformatics. 2014. PMID: 24845653 Free PMC article.
31 results