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2015 2
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2019 5
2024 0

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IEDB-AR: immune epitope database-analysis resource in 2019.
Dhanda SK, Mahajan S, Paul S, Yan Z, Kim H, Jespersen MC, Jurtz V, Andreatta M, Greenbaum JA, Marcatili P, Sette A, Nielsen M, Peters B. Dhanda SK, et al. Among authors: jespersen mc. Nucleic Acids Res. 2019 Jul 2;47(W1):W502-W506. doi: 10.1093/nar/gkz452. Nucleic Acids Res. 2019. PMID: 31114900 Free PMC article.
TCRpMHCmodels: Structural modelling of TCR-pMHC class I complexes.
Jensen KK, Rantos V, Jappe EC, Olsen TH, Jespersen MC, Jurtz V, Jessen LE, Lanzarotti E, Mahajan S, Peters B, Nielsen M, Marcatili P. Jensen KK, et al. Among authors: jespersen mc. Sci Rep. 2019 Oct 10;9(1):14530. doi: 10.1038/s41598-019-50932-4. Sci Rep. 2019. PMID: 31601838 Free PMC article.
Benchmark datasets of immune receptor-epitope structural complexes.
Mahajan S, Yan Z, Jespersen MC, Jensen KK, Marcatili P, Nielsen M, Sette A, Peters B. Mahajan S, et al. Among authors: jespersen mc. BMC Bioinformatics. 2019 Oct 10;20(1):490. doi: 10.1186/s12859-019-3109-6. BMC Bioinformatics. 2019. PMID: 31601176 Free PMC article.
LYRA, a webserver for lymphocyte receptor structural modeling.
Klausen MS, Anderson MV, Jespersen MC, Nielsen M, Marcatili P. Klausen MS, et al. Among authors: jespersen mc. Nucleic Acids Res. 2015 Jul 1;43(W1):W349-55. doi: 10.1093/nar/gkv535. Epub 2015 May 24. Nucleic Acids Res. 2015. PMID: 26007650 Free PMC article.
Epitope Specific Antibodies and T Cell Receptors in the Immune Epitope Database.
Mahajan S, Vita R, Shackelford D, Lane J, Schulten V, Zarebski L, Jespersen MC, Marcatili P, Nielsen M, Sette A, Peters B. Mahajan S, et al. Among authors: jespersen mc. Front Immunol. 2018 Nov 20;9:2688. doi: 10.3389/fimmu.2018.02688. eCollection 2018. Front Immunol. 2018. PMID: 30515166 Free PMC article.
Tools and data services registry: a community effort to document bioinformatics resources.
Ison J, Rapacki K, Ménager H, Kalaš M, Rydza E, Chmura P, Anthon C, Beard N, Berka K, Bolser D, Booth T, Bretaudeau A, Brezovsky J, Casadio R, Cesareni G, Coppens F, Cornell M, Cuccuru G, Davidsen K, Vedova GD, Dogan T, Doppelt-Azeroual O, Emery L, Gasteiger E, Gatter T, Goldberg T, Grosjean M, Grüning B, Helmer-Citterich M, Ienasescu H, Ioannidis V, Jespersen MC, Jimenez R, Juty N, Juvan P, Koch M, Laibe C, Li JW, Licata L, Mareuil F, Mičetić I, Friborg RM, Moretti S, Morris C, Möller S, Nenadic A, Peterson H, Profiti G, Rice P, Romano P, Roncaglia P, Saidi R, Schafferhans A, Schwämmle V, Smith C, Sperotto MM, Stockinger H, Vařeková RS, Tosatto SC, de la Torre V, Uva P, Via A, Yachdav G, Zambelli F, Vriend G, Rost B, Parkinson H, Løngreen P, Brunak S. Ison J, et al. Among authors: jespersen mc. Nucleic Acids Res. 2016 Jan 4;44(D1):D38-47. doi: 10.1093/nar/gkv1116. Epub 2015 Nov 3. Nucleic Acids Res. 2016. PMID: 26538599 Free PMC article.