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Page 1
Biochemicals from food waste and recalcitrant biomass via syngas fermentation: A review.
Wainaina S, Horváth IS, Taherzadeh MJ. Wainaina S, et al. Bioresour Technol. 2018 Jan;248(Pt A):113-121. doi: 10.1016/j.biortech.2017.06.075. Epub 2017 Jun 15. Bioresour Technol. 2018. PMID: 28651875 Review.
Such bioreactors have shown promising results in increasing the volumetric mass transfer coefficient (k(L)a). High gas pressure also influences the mass transfer in certain batch processes, although the presence of impurities in the gas would impede the process....
Such bioreactors have shown promising results in increasing the volumetric mass transfer coefficient (k(L)a). High gas pressure also …
Accurate prediction of RNA 5-hydroxymethylcytosine modification by utilizing novel position-specific gapped k-mer descriptors.
Ahmed S, Hossain Z, Uddin M, Taherzadeh G, Sharma A, Shatabda S, Dehzangi A. Ahmed S, et al. Comput Struct Biotechnol J. 2020 Nov 12;18:3528-3538. doi: 10.1016/j.csbj.2020.10.032. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 33304452 Free PMC article.
To build iRNA5hmC-PS we extract a set of novel sequence-based features called Position-Specific Gapped k-mer (PSG k-mer) to obtain maximum sequential information. Our feature analysis shows that our proposed PSG k-mer features contain vital information for th …
To build iRNA5hmC-PS we extract a set of novel sequence-based features called Position-Specific Gapped k-mer (PSG k-mer) to ob …
Predicting lysine-malonylation sites of proteins using sequence and predicted structural features.
Taherzadeh G, Yang Y, Xu H, Xue Y, Liew AW, Zhou Y. Taherzadeh G, et al. J Comput Chem. 2018 Aug 15;39(22):1757-1763. doi: 10.1002/jcc.25353. Epub 2018 May 14. J Comput Chem. 2018. PMID: 29761520
Malonylation is a recently discovered post-translational modification (PTM) in which a malonyl group attaches to a lysine (K) amino acid residue of a protein. In this work, a novel machine learning model, SPRINT-Mal, is developed to predict malonylation sites by employing …
Malonylation is a recently discovered post-translational modification (PTM) in which a malonyl group attaches to a lysine (K) amino a …
Do Kombucha Symbiotic Cultures of Bacteria and Yeast Affect Bacterial Cellulose Yield in Molasses?
Devanthi PVP, Kho K, Nurdiansyah R, Briot A, Taherzadeh MJ, Aslanzadeh S. Devanthi PVP, et al. J Fungi (Basel). 2021 Aug 28;7(9):705. doi: 10.3390/jof7090705. J Fungi (Basel). 2021. PMID: 34575743 Free PMC article.
The results showed that the co-culture stimulated K. intermedius by ~2 log CFU/mL, which could be attributed to enhanced reducing sugar utilization. ...In contrast to other studies, regardless of D. bruxellensis, K. intermedius increased the pH to ~9.0, favoring the …
The results showed that the co-culture stimulated K. intermedius by ~2 log CFU/mL, which could be attributed to enhanced reducing sug …
Evaluating Scale-Up Cultivation Modes for Aspergillus oryzae Biomass Production Using VFA-Rich Effluents from Agro-Industrial Residues.
Sar T, Uwineza C, Taherzadeh MJ, Mahboubi A. Sar T, et al. BioTech (Basel). 2025 Sep 24;14(4):76. doi: 10.3390/biotech14040076. BioTech (Basel). 2025. PMID: 41133687 Free PMC article.
Additionally, the fungal biomass contained significant levels of essential macronutrients and trace elements, including Mg, Ca, K, Mn, and Fe, which are crucial if the biomass is intended to be used in animal feed formulations. ...
Additionally, the fungal biomass contained significant levels of essential macronutrients and trace elements, including Mg, Ca, K, Mn …
Waste-derived volatile fatty acid production and ammonium removal from it by ion exchange process with natural zeolite.
Sapmaz T, Mahboubi A, Taher MN, Beler-Baykal B, Karagunduz A, Taherzadeh MJ, Koseoglu-Imer DY. Sapmaz T, et al. Bioengineered. 2022 Jun;13(6):14751-14769. doi: 10.1080/21655979.2022.2109507. Bioengineered. 2022. PMID: 36250716 Free PMC article.
The effect of some operational parameters on process performance such as pH, initial NH(4)(+) loading and potassium ion (K(+)) concentration was investigated. The pH had a negligible effect on ammonium removal for a pH range of 3-7, while the removal efficiency of ammonium …
The effect of some operational parameters on process performance such as pH, initial NH(4)(+) loading and potassium ion (K(+)) concen …
SucStruct: Prediction of succinylated lysine residues by using structural properties of amino acids.
López Y, Dehzangi A, Lal SP, Taherzadeh G, Michaelson J, Sattar A, Tsunoda T, Sharma A. López Y, et al. Anal Biochem. 2017 Jun 15;527:24-32. doi: 10.1016/j.ab.2017.03.021. Epub 2017 Mar 28. Anal Biochem. 2017. PMID: 28363440
Succinylated and non-succinylated lysines were first retrieved from 670 proteins and characteristics such as accessible surface area, backbone torsion angles and local structure conformations were incorporated. We used the k-nearest neighbors cleaning treatment for dealing …
Succinylated and non-succinylated lysines were first retrieved from 670 proteins and characteristics such as accessible surface area, backbo …
The Effect of Dekkera bruxellensis Concentration and Inoculation Time on Biochemical Changes and Cellulose Biosynthesis by Komagataeibacter intermedius.
Devanthi PVP, Pratama F, Kho K, Taherzadeh MJ, Aslanzadeh S. Devanthi PVP, et al. J Fungi (Basel). 2022 Nov 15;8(11):1206. doi: 10.3390/jof8111206. J Fungi (Basel). 2022. PMID: 36422025 Free PMC article.
This study investigates BC production and biochemical changes in the K. intermedius-D. bruxellensis co-culture system. D. bruxellensis was introduced at various concentrations (10(3) and 10(6) CFU/mL) and inoculation times (days 0 and 3). BC yield was ~24% lower when D. br …
This study investigates BC production and biochemical changes in the K. intermedius-D. bruxellensis co-culture system. D. bruxellensi …
Structure and function of resistance arteries from BB-creatine kinase and ubiquitous Mt-creatine kinase double knockout mice.
Taherzadeh Z, van Montfrans GA, Van der Zee CEEM, Streijger F, Bakker ENTP, Brewster LM. Taherzadeh Z, et al. Amino Acids. 2020 Jul;52(6-7):1033-1041. doi: 10.1007/s00726-020-02872-x. Epub 2020 Jul 21. Amino Acids. 2020. PMID: 32696177
Using a Mulvany Halpern myograph, we assessed the acute maximum contractile force with 125 mM K(+) and 10(-5) M norepinephrine, and the effect of two inhibitors, dinitrofluorobenzene, which inhibits phosphotransfer enzymes (0.1 muM), and the specific adenylate kinase inhib …
Using a Mulvany Halpern myograph, we assessed the acute maximum contractile force with 125 mM K(+) and 10(-5) M norepinephrine, and t …
Invasive weed optimization coupled biomass and product dynamics of tuning soybean husk towards lipolytic enzyme.
Garlapati VK, Parashar SK, Klykov S, Vundavilli PR, Sevda S, Srivastava SK, Taherzadeh MJ. Garlapati VK, et al. Bioresour Technol. 2022 Jan;344(Pt B):126254. doi: 10.1016/j.biortech.2021.126254. Epub 2021 Oct 30. Bioresour Technol. 2022. PMID: 34757227
The product dynamic studies reveal the kinetic parameters of k(st), k(div), P(Fin), which seem to be equal to -0.0338, 0.0896 and 68.1, respectively. ...
The product dynamic studies reveal the kinetic parameters of k(st), k(div), P(Fin), which seem to be equal to -0.0338, 0.0896 …
13 results