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GLYDE-II: The GLYcan data exchange format.
Ranzinger R, Kochut KJ, Miller JA, Eavenson M, Lütteke T, York WS. Ranzinger R, et al. Among authors: kochut kj. Perspect Sci (Neth). 2017 Jan;11:24-30. doi: 10.1016/j.pisc.2016.05.013. Epub 2016 Oct 20. Perspect Sci (Neth). 2017. PMID: 28955652 Free PMC article.
Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources.
Huang LC, Ross KE, Baffi TR, Drabkin H, Kochut KJ, Ruan Z, D'Eustachio P, McSkimming D, Arighi C, Chen C, Natale DA, Smith C, Gaudet P, Newton AC, Wu C, Kannan N. Huang LC, et al. Among authors: kochut kj. Sci Rep. 2018 Apr 25;8(1):6518. doi: 10.1038/s41598-018-24457-1. Sci Rep. 2018. PMID: 29695735 Free PMC article.
Qrator: a web-based curation tool for glycan structures.
Eavenson M, Kochut KJ, Miller JA, Ranzinger R, Tiemeyer M, Aoki K, York WS. Eavenson M, et al. Among authors: kochut kj. Glycobiology. 2015 Jan;25(1):66-73. doi: 10.1093/glycob/cwu090. Epub 2014 Aug 27. Glycobiology. 2015. PMID: 25165068 Free PMC article.
Mapping by sequencing the Pneumocystis genome using the ordering DNA sequences V3 tool.
Xu Z, Lance B, Vargas C, Arpinar B, Bhandarkar S, Kraemer E, Kochut KJ, Miller JA, Wagner JR, Weise MJ, Wunderlich JK, Stringer J, Smulian G, Cushion MT, Arnold J. Xu Z, et al. Among authors: kochut kj. Genetics. 2003 Apr;163(4):1299-313. doi: 10.1093/genetics/163.4.1299. Genetics. 2003. PMID: 12702676 Free PMC article.