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2020 10
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An inflammatory cytokine signature predicts COVID-19 severity and survival.
Del Valle DM, Kim-Schulze S, Huang HH, Beckmann ND, Nirenberg S, Wang B, Lavin Y, Swartz TH, Madduri D, Stock A, Marron TU, Xie H, Patel M, Tuballes K, Van Oekelen O, Rahman A, Kovatch P, Aberg JA, Schadt E, Jagannath S, Mazumdar M, Charney AW, Firpo-Betancourt A, Mendu DR, Jhang J, Reich D, Sigel K, Cordon-Cardo C, Feldmann M, Parekh S, Merad M, Gnjatic S. Del Valle DM, et al. Among authors: kovatch p. Nat Med. 2020 Oct;26(10):1636-1643. doi: 10.1038/s41591-020-1051-9. Epub 2020 Aug 24. Nat Med. 2020. PMID: 32839624
An inflammatory cytokine signature helps predict COVID-19 severity and death.
Del Valle DM, Kim-Schulze S, Hsin-Hui H, Beckmann ND, Nirenberg S, Wang B, Lavin Y, Swartz T, Madduri D, Stock A, Marron T, Xie H, Patel MK, van Oekelen O, Rahman A, Kovatch P, Aberg J, Schadt E, Jagannath S, Mazumdar M, Charney A, Firpo-Betancourt A, Mendu DR, Jhang J, Reich D, Sigel K, Cordon-Cardo C, Feldmann M, Parekh S, Merad M, Gnjatic S. Del Valle DM, et al. Among authors: kovatch p. medRxiv. 2020 May 30:2020.05.28.20115758. doi: 10.1101/2020.05.28.20115758. Preprint. medRxiv. 2020. PMID: 32511562 Free PMC article. Updated.
Clinical Characteristics of Hospitalized Covid-19 Patients in New York City.
Paranjpe I, Russak A, De Freitas JK, Lala A, Miotto R, Vaid A, Johnson KW, Danieletto M, Golden E, Meyer D, Singh M, Somani S, Manna S, Nangia U, Kapoor A, O'Hagan R, O'Reilly PF, Huckins LM, Glowe P, Kia A, Timsina P, Freeman RM, Levin MA, Jhang J, Firpo A, Kovatch P, Finkelstein J, Aberg JA, Bagiella E, Horowitz CR, Murphy B, Fayad ZA, Narula J, Nestler EJ, Fuster V, Cordon-Cardo C, Charney DS, Reich DL, Just AC, Bottinger EP, Charney AW, Glicksberg BS, Nadkarni G. Paranjpe I, et al. Among authors: kovatch p. medRxiv. 2020 Apr 23:2020.04.19.20062117. doi: 10.1101/2020.04.19.20062117. Preprint. medRxiv. 2020. PMID: 32511655 Free PMC article.
Machine Learning to Predict Mortality and Critical Events in a Cohort of Patients With COVID-19 in New York City: Model Development and Validation.
Vaid A, Somani S, Russak AJ, De Freitas JK, Chaudhry FF, Paranjpe I, Johnson KW, Lee SJ, Miotto R, Richter F, Zhao S, Beckmann ND, Naik N, Kia A, Timsina P, Lala A, Paranjpe M, Golden E, Danieletto M, Singh M, Meyer D, O'Reilly PF, Huckins L, Kovatch P, Finkelstein J, Freeman RM, Argulian E, Kasarskis A, Percha B, Aberg JA, Bagiella E, Horowitz CR, Murphy B, Nestler EJ, Schadt EE, Cho JH, Cordon-Cardo C, Fuster V, Charney DS, Reich DL, Bottinger EP, Levin MA, Narula J, Fayad ZA, Just AC, Charney AW, Nadkarni GN, Glicksberg BS. Vaid A, et al. Among authors: kovatch p. J Med Internet Res. 2020 Nov 6;22(11):e24018. doi: 10.2196/24018. J Med Internet Res. 2020. PMID: 33027032 Free PMC article.
Retrospective cohort study of clinical characteristics of 2199 hospitalised patients with COVID-19 in New York City.
Paranjpe I, Russak AJ, De Freitas JK, Lala A, Miotto R, Vaid A, Johnson KW, Danieletto M, Golden E, Meyer D, Singh M, Somani S, Kapoor A, O'Hagan R, Manna S, Nangia U, Jaladanki SK, O'Reilly P, Huckins LM, Glowe P, Kia A, Timsina P, Freeman RM, Levin MA, Jhang J, Firpo A, Kovatch P, Finkelstein J, Aberg JA, Bagiella E, Horowitz CR, Murphy B, Fayad ZA, Narula J, Nestler EJ, Fuster V, Cordon-Cardo C, Charney D, Reich DL, Just A, Bottinger EP, Charney AW, Glicksberg BS, Nadkarni GN; Mount Sinai COVID Informatics Center (MSCIC). Paranjpe I, et al. Among authors: kovatch p. BMJ Open. 2020 Nov 27;10(11):e040736. doi: 10.1136/bmjopen-2020-040736. BMJ Open. 2020. PMID: 33247020 Free PMC article.
Hospitalised COVID-19 patients of the Mount Sinai Health System: a retrospective observational study using the electronic medical records.
Wang Z, Zheutlin A, Kao YH, Ayers K, Gross S, Kovatch P, Nirenberg S, Charney A, Nadkarni G, De Freitas JK, O'Reilly P, Just A, Horowitz C, Martin G, Branch A, Glicksberg BS, Charney D, Reich D, Oh WK, Schadt E, Chen R, Li L. Wang Z, et al. Among authors: kovatch p. BMJ Open. 2020 Oct 26;10(10):e040441. doi: 10.1136/bmjopen-2020-040441. BMJ Open. 2020. PMID: 33109676 Free PMC article.
PREDICTIVE MODELING OF HOSPITAL READMISSION RATES USING ELECTRONIC MEDICAL RECORD-WIDE MACHINE LEARNING: A CASE-STUDY USING MOUNT SINAI HEART FAILURE COHORT.
Shameer K, Johnson KW, Yahi A, Miotto R, Li LI, Ricks D, Jebakaran J, Kovatch P, Sengupta PP, Gelijns S, Moskovitz A, Darrow B, David DL, Kasarskis A, Tatonetti NP, Pinney S, Dudley JT. Shameer K, et al. Among authors: kovatch p. Pac Symp Biocomput. 2017;22:276-287. doi: 10.1142/9789813207813_0027. Pac Symp Biocomput. 2017. PMID: 27896982 Free PMC article.
Physiology of cardiomyocyte injury in COVID-19.
Siddiq MM, Chan AT, Miorin L, Yadaw AS, Beaumont KG, Kehrer T, White KM, Cupic A, Tolentino RE, Hu B, Stern AD, Tavassoly I, Hansen J, Martinez P, Dubois N, Schaniel C, Iyengar-Kapuganti R, Kukar N, Giustino G, Sud K, Nirenberg S, Kovatch P, Goldfarb J, Croft L, McLaughlin MA, Argulian E, Lerakis S, Narula J, García-Sastre A, Iyengar R. Siddiq MM, et al. Among authors: kovatch p. medRxiv. 2020 Nov 13:2020.11.10.20229294. doi: 10.1101/2020.11.10.20229294. Preprint. medRxiv. 2020. PMID: 33200140 Free PMC article.
Optimizing High-Performance Computing Systems for Biomedical Workloads.
Kovatch P, Gai L, Cho HM, Fluder E, Jiang D. Kovatch P, et al. IEEE Int Symp Parallel Distrib Process Workshops Phd Forum. 2020 May;2020:183-192. doi: 10.1109/ipdpsw50202.2020.00040. Epub 2020 Jul 28. IEEE Int Symp Parallel Distrib Process Workshops Phd Forum. 2020. PMID: 33088611 Free PMC article.
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