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Page 1
Systematic investigation of allelic regulatory activity of schizophrenia-associated common variants.
McAfee JC, Lee S, Lee J, Bell JL, Krupa O, Davis J, Insigne K, Bond ML, Zhao N, Boyle AP, Phanstiel DH, Love MI, Stein JL, Ruzicka WB, Davila-Velderrain J, Kosuri S, Won H. McAfee JC, et al. Among authors: krupa o. Cell Genom. 2023 Sep 15;3(10):100404. doi: 10.1016/j.xgen.2023.100404. eCollection 2023 Oct 11. Cell Genom. 2023. PMID: 37868037 Free PMC article.
Focus on your locus with a massively parallel reporter assay.
McAfee JC, Bell JL, Krupa O, Matoba N, Stein JL, Won H. McAfee JC, et al. Among authors: krupa o. J Neurodev Disord. 2022 Sep 9;14(1):50. doi: 10.1186/s11689-022-09461-x. J Neurodev Disord. 2022. PMID: 36085003 Free PMC article. Review.
Brain-trait-associated variants impact cell-type-specific gene regulation during neurogenesis.
Aygün N, Elwell AL, Liang D, Lafferty MJ, Cheek KE, Courtney KP, Mory J, Hadden-Ford E, Krupa O, de la Torre-Ubieta L, Geschwind DH, Love MI, Stein JL. Aygün N, et al. Among authors: krupa o. Am J Hum Genet. 2021 Sep 2;108(9):1647-1668. doi: 10.1016/j.ajhg.2021.07.011. Epub 2021 Aug 19. Am J Hum Genet. 2021. PMID: 34416157 Free PMC article.
SAU-Net: A Unified Network for Cell Counting in 2D and 3D Microscopy Images.
Guo Y, Krupa O, Stein J, Wu G, Krishnamurthy A. Guo Y, et al. Among authors: krupa o. IEEE/ACM Trans Comput Biol Bioinform. 2022 Jul-Aug;19(4):1920-1932. doi: 10.1109/TCBB.2021.3089608. Epub 2022 Aug 8. IEEE/ACM Trans Comput Biol Bioinform. 2022. PMID: 34133284 Free PMC article.
Cell-type-specific effects of genetic variation on chromatin accessibility during human neuronal differentiation.
Liang D, Elwell AL, Aygün N, Krupa O, Wolter JM, Kyere FA, Lafferty MJ, Cheek KE, Courtney KP, Yusupova M, Garrett ME, Ashley-Koch A, Crawford GE, Love MI, de la Torre-Ubieta L, Geschwind DH, Stein JL. Liang D, et al. Among authors: krupa o. Nat Neurosci. 2021 Jul;24(7):941-953. doi: 10.1038/s41593-021-00858-w. Epub 2021 May 20. Nat Neurosci. 2021. PMID: 34017130 Free PMC article.
Memo1-Mediated Tiling of Radial Glial Cells Facilitates Cerebral Cortical Development.
Nakagawa N, Plestant C, Yabuno-Nakagawa K, Li J, Lee J, Huang CW, Lee A, Krupa O, Adhikari A, Thompson S, Rhynes T, Arevalo V, Stein JL, Molnár Z, Badache A, Anton ES. Nakagawa N, et al. Among authors: krupa o. Neuron. 2019 Sep 4;103(5):836-852.e5. doi: 10.1016/j.neuron.2019.05.049. Epub 2019 Jul 2. Neuron. 2019. PMID: 31277925 Free PMC article.
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