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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2003 1
2004 1
2005 2
2006 1
2007 3
2008 3
2009 2
2010 3
2011 1
2014 1
2015 2
2016 1
2019 1
2020 1
2021 2
2022 2
2024 1

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26 results

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Page 1
Spaced seeds improve k-mer-based metagenomic classification.
Břinda K, Sykulski M, Kucherov G. Břinda K, et al. Among authors: kucherov g. Bioinformatics. 2015 Nov 15;31(22):3584-92. doi: 10.1093/bioinformatics/btv419. Epub 2015 Jul 25. Bioinformatics. 2015. PMID: 26209798
Space-efficient representation of genomic k-mer count tables.
Shibuya Y, Belazzougui D, Kucherov G. Shibuya Y, et al. Among authors: kucherov g. Algorithms Mol Biol. 2022 Mar 21;17(1):5. doi: 10.1186/s13015-022-00212-0. Algorithms Mol Biol. 2022. PMID: 35317833 Free PMC article.
Multiseed lossless filtration.
Kucherov G, Noé L, Roytberg M. Kucherov G, et al. IEEE/ACM Trans Comput Biol Bioinform. 2005 Jan-Mar;2(1):51-61. doi: 10.1109/TCBB.2005.12. IEEE/ACM Trans Comput Biol Bioinform. 2005. PMID: 17044164
Minimally overlapping words for sequence similarity search.
Frith MC, Noé L, Kucherov G. Frith MC, et al. Among authors: kucherov g. Bioinformatics. 2021 Apr 1;36(22-23):5344-5350. doi: 10.1093/bioinformatics/btaa1054. Bioinformatics. 2021. PMID: 33346833 Free PMC article.
Efficient and Robust Search of Microbial Genomes via Phylogenetic Compression.
Břinda K, Lima L, Pignotti S, Quinones-Olvera N, Salikhov K, Chikhi R, Kucherov G, Iqbal Z, Baym M. Břinda K, et al. Among authors: kucherov g. bioRxiv [Preprint]. 2024 May 11:2023.04.15.536996. doi: 10.1101/2023.04.15.536996. bioRxiv. 2024. PMID: 37131636 Free PMC article. Preprint.
RNF: a general framework to evaluate NGS read mappers.
Břinda K, Boeva V, Kucherov G. Břinda K, et al. Among authors: kucherov g. Bioinformatics. 2016 Jan 1;32(1):136-9. doi: 10.1093/bioinformatics/btv524. Epub 2015 Sep 9. Bioinformatics. 2016. PMID: 26353839 Free PMC article.
Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing.
Břinda K, Callendrello A, Ma KC, MacFadden DR, Charalampous T, Lee RS, Cowley L, Wadsworth CB, Grad YH, Kucherov G, O'Grady J, Baym M, Hanage WP. Břinda K, et al. Among authors: kucherov g. Nat Microbiol. 2020 Mar;5(3):455-464. doi: 10.1038/s41564-019-0656-6. Epub 2020 Feb 10. Nat Microbiol. 2020. PMID: 32042129 Free PMC article.
26 results