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Rapid genome editing by CRISPR-Cas9-POLD3 fusion.
Reint G, Li Z, Labun K, Keskitalo S, Soppa I, Mamia K, Tolo E, Szymanska M, Meza-Zepeda LA, Lorenz S, Cieslar-Pobuda A, Hu X, Bordin DL, Staerk J, Valen E, Schmierer B, Varjosalo M, Taipale J, Haapaniemi E. Reint G, et al. Among authors: labun k. Elife. 2021 Dec 13;10:e75415. doi: 10.7554/eLife.75415. Elife. 2021. PMID: 34898428 Free PMC article.
Long-read single-molecule RNA structure sequencing using nanopore.
Bizuayehu TT, Labun K, Jakubec M, Jefimov K, Niazi AM, Valen E. Bizuayehu TT, et al. Among authors: labun k. Nucleic Acids Res. 2022 Nov 11;50(20):e120. doi: 10.1093/nar/gkac775. Nucleic Acids Res. 2022. PMID: 36166000 Free PMC article.
Deep conservation of ribosome stall sites across RNA processing genes.
Chyżyńska K, Labun K, Jones C, Grellscheid SN, Valen E. Chyżyńska K, et al. Among authors: labun k. NAR Genom Bioinform. 2021 May 25;3(2):lqab038. doi: 10.1093/nargab/lqab038. eCollection 2021 Jun. NAR Genom Bioinform. 2021. PMID: 34056595 Free PMC article.
ORFik: a comprehensive R toolkit for the analysis of translation.
Tjeldnes H, Labun K, Torres Cleuren Y, Chyżyńska K, Świrski M, Valen E. Tjeldnes H, et al. Among authors: labun k. BMC Bioinformatics. 2021 Jun 19;22(1):336. doi: 10.1186/s12859-021-04254-w. BMC Bioinformatics. 2021. PMID: 34147079 Free PMC article.