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Page 1
Prediction of novel semi-conducting two-dimensional MX(2) phosphides and chalcogenides (M = Zn, Cd; X = P, S, Se) with 5-membered rings.
Amaki E, Mahdavifar Z, Frapper G. Amaki E, et al. Phys Chem Chem Phys. 2023 Nov 8;25(43):29506-29515. doi: 10.1039/d3cp04196d. Phys Chem Chem Phys. 2023. PMID: 37889104
In this study, we employed evolutionary algorithms and heuristic approaches combined with first-principles calculations to predict penta-MX(2) structures (M = Zn, Cd; X = P, S, Se). All selected 2D penta-MX(2) phases are dynamically, thermodynamically, mechanically, and th …
In this study, we employed evolutionary algorithms and heuristic approaches combined with first-principles calculations to predict penta-MX( …
Peptide microarray-based identification of Mycobacterium tuberculosis epitope binding to HLA-DRB1*0101, DRB1*1501, and DRB1*0401.
Gaseitsiwe S, Valentini D, Mahdavifar S, Reilly M, Ehrnst A, Maeurer M. Gaseitsiwe S, et al. Clin Vaccine Immunol. 2010 Jan;17(1):168-75. doi: 10.1128/CVI.00208-09. Epub 2009 Oct 28. Clin Vaccine Immunol. 2010. PMID: 19864486 Free PMC article.
Five hundred forty-four peptides bound to all three MHC class II molecules, 609 bound to only two, and 756 bound to only a single MHC class II molecule. This allowed us to rank M. tuberculosis proteins by epitope density. M. tuberculosis proteins contained "hot spot …
Five hundred forty-four peptides bound to all three MHC class II molecules, 609 bound to only two, and 756 bound to only a single MHC class …
Evolutionary search for (MB(16))(Q) (M = Sc-Ni; Q = 0/-1) clusters: bowl/boat vs. tubular shape.
Mahdavifar Z, Shojaei F. Mahdavifar Z, et al. Phys Chem Chem Phys. 2019 Oct 28;21(40):22618-22628. doi: 10.1039/c9cp03999f. Epub 2019 Oct 8. Phys Chem Chem Phys. 2019. PMID: 31591621
Herein, using universal structure predictor: evolutionary xtallography (USPEX) method, followed by density functional theory (DFT) calculations, we performed global searches for the most stable structures of (MB(16))(Q) (M = Sc, Ti, V, Cr, Mn, Fe, Co, Ni; Q = 0, -1) cluste …
Herein, using universal structure predictor: evolutionary xtallography (USPEX) method, followed by density functional theory (DFT) calculati …
Pattern recognition in pulmonary tuberculosis defined by high content peptide microarray chip analysis representing 61 proteins from M. tuberculosis.
Gaseitsiwe S, Valentini D, Mahdavifar S, Magalhaes I, Hoft DF, Zerweck J, Schutkowski M, Andersson J, Reilly M, Maeurer MJ. Gaseitsiwe S, et al. PLoS One. 2008;3(12):e3840. doi: 10.1371/journal.pone.0003840. Epub 2008 Dec 9. PLoS One. 2008. PMID: 19065269 Free PMC article.
A similar approach can be helpful to identify biologically relevant and clinically meaningful targets in M. tuberculosis (MTB) infection for diagnosis or TB vaccine development in clinically well defined populations. METHOD: We constructed a high-content peptide microarray …
A similar approach can be helpful to identify biologically relevant and clinically meaningful targets in M. tuberculosis (MTB) infect …
Copper halide diselenium: predicted two-dimensional materials with ultrahigh anisotropic carrier mobilities.
Shojaei F, Azizi M, Mahdavifar Z, Wang B, Frapper G. Shojaei F, et al. RSC Adv. 2020 Feb 24;10(14):8016-8026. doi: 10.1039/c9ra10380e. eCollection 2020 Feb 24. RSC Adv. 2020. PMID: 35497853 Free PMC article.
We show the monolayers are dynamically, mechanically and thermodynamically stable and have very small cleavage energies of 0.26 J m(-2), suggesting their exfoliation is experimentally feasible. The monolayers are indirect-gap semiconductors with practically the same modera …
We show the monolayers are dynamically, mechanically and thermodynamically stable and have very small cleavage energies of 0.26 J m(- …
Safety and immunogenicity of the novel H4:IC31 tuberculosis vaccine candidate in BCG-vaccinated adults: Two phase I dose escalation trials.
Norrby M, Vesikari T, Lindqvist L, Maeurer M, Ahmed R, Mahdavifar S, Bennett S, McClain JB, Shepherd BM, Li D, Hokey DA, Kromann I, Hoff ST, Andersen P, de Visser AW, Joosten SA, Ottenhoff THM, Andersson J, Brighenti S. Norrby M, et al. Vaccine. 2017 Mar 14;35(12):1652-1661. doi: 10.1016/j.vaccine.2017.01.055. Epub 2017 Feb 17. Vaccine. 2017. PMID: 28216183 Free article. Clinical Trial.
We investigated the safety and immunogenicity of a novel TB vaccine candidate, H4:IC31 (AERAS-404) that is composed of a fusion protein of M. tuberculosis antigens Ag85B and TB10.4 combined with an IC31 adjuvant. METHODS: BCG-vaccinated healthy subjects were immunized with …
We investigated the safety and immunogenicity of a novel TB vaccine candidate, H4:IC31 (AERAS-404) that is composed of a fusion protein of …
Effects of a space modulation on the behavior of a 1D alternating Heisenberg spin-1/2 model.
Mahdavifar S, Abouie J. Mahdavifar S, et al. J Phys Condens Matter. 2011 Jun 22;23(24):246002. doi: 10.1088/0953-8984/23/24/246002. Epub 2011 May 26. J Phys Condens Matter. 2011. PMID: 21613724
By opening the new gap, a magnetization plateau appears at M(sat). The effects of the space modulation are reflected in the emergence of a plateau in other physical functions such as the F-dimer and the bond-dimer order parameters, and the pair-wise entanglement....
By opening the new gap, a magnetization plateau appears at M(sat). The effects of the space modulation are reflected in the emergence …
Identification and testing of control peptides for antigen microarrays.
Ngo Y, Advani R, Valentini D, Gaseitsiwe S, Mahdavifar S, Maeurer M, Reilly M. Ngo Y, et al. J Immunol Methods. 2009 Apr 15;343(2):68-78. doi: 10.1016/j.jim.2008.12.004. Epub 2009 Jan 20. J Immunol Methods. 2009. PMID: 19162032
METHODS: Peptide microarray slides containing 10,000-23,000 synthetic peptides spanning proteins involved in M. tuberculosis or Bordatella pertussis were incubated with secondary antibody in sample dilution buffer. ...
METHODS: Peptide microarray slides containing 10,000-23,000 synthetic peptides spanning proteins involved in M. tuberculosis or Borda …