Allele and haplotype frequencies for HLA-DQ in Iranian celiac disease patients

World J Gastroenterol. 2014 May 28;20(20):6302-8. doi: 10.3748/wjg.v20.i20.6302.

Abstract

Aim: To assess the distribution of human leukocyte antigen (HLA)-DQ2 and -DQ8 in Iranian celiac disease (CD) patients and compare them to healthy Iranian controls.

Methods: To predict the HLA-DQA1 and -DQB1 genes, we used six previously reported HLA-tagging single nucleotide polymorphism to determine HLA genotypes in 59 Iranian patients with 'biopsy-confirmed' CD and in 151 healthy Iranian individuals. To test the transferability of the method, 50 cases and controls were also typed using a commercial kit that identifies individual carriers of DQ2, DQ7 and DQ8 alleles.

Results: In this pilot study 97% of CD cases (n = 57) and 58% of controls (n = 87) were carriers of HLA-DQ2 and/or HLA-DQ8 heterodimers, either in the homozygous or heterozygous state. The HLA-DQ pattern of these 57 CD patients: heterozygous DQ2.2 (n = 14) and homozygous DQ2.2 (n = 1), heterozygous DQ2.5 (n = 33) and homozygous DQ2.5 (n = 8), heterozygous DQ8 (n = 13) and homozygous DQ8 (n = 2). Two CD patients were negative for both DQ2 and DQ8 (3%).

Conclusion: The prevalence of DQ8 in our CD population was higher than that reported in other populations (25.4%). As reported in other populations, our results underline the primary importance of HLA-DQ alleles in the Iranian population's susceptibility to CD.

Keywords: Celiac disease; Human leukocyte antigen typing; Iran; Susceptibility; Validation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Alleles
  • Case-Control Studies
  • Celiac Disease / genetics*
  • Child
  • Child, Preschool
  • Female
  • Gene Frequency*
  • Genotype
  • HLA-DQ Antigens / genetics*
  • HLA-DQ alpha-Chains / genetics
  • HLA-DQ beta-Chains / genetics
  • Haplotypes*
  • Humans
  • Iran
  • Male
  • Middle Aged
  • Pilot Projects
  • Polymorphism, Single Nucleotide*
  • Prevalence
  • Young Adult

Substances

  • HLA-DQ Antigens
  • HLA-DQ alpha-Chains
  • HLA-DQ beta-Chains
  • HLA-DQ2 antigen
  • HLA-DQ7 antigen
  • HLA-DQ8 antigen
  • HLA-DQA1 antigen
  • HLA-DQB1 antigen