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Year Number of Results
2018 1
2019 4
2020 2
2021 5
2022 8
2023 8

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28 results

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Page 1
The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2.
Pekar JE, Magee A, Parker E, Moshiri N, Izhikevich K, Havens JL, Gangavarapu K, Malpica Serrano LM, Crits-Christoph A, Matteson NL, Zeller M, Levy JI, Wang JC, Hughes S, Lee J, Park H, Park MS, Ching Zi Yan K, Lin RTP, Mat Isa MN, Noor YM, Vasylyeva TI, Garry RF, Holmes EC, Rambaut A, Suchard MA, Andersen KG, Worobey M, Wertheim JO. Pekar JE, et al. Among authors: moshiri n. Science. 2022 Aug 26;377(6609):960-966. doi: 10.1126/science.abp8337. Epub 2022 Jul 26. Science. 2022. PMID: 35881005 Free PMC article.
Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission.
Karthikeyan S, Levy JI, De Hoff P, Humphrey G, Birmingham A, Jepsen K, Farmer S, Tubb HM, Valles T, Tribelhorn CE, Tsai R, Aigner S, Sathe S, Moshiri N, Henson B, Mark AM, Hakim A, Baer NA, Barber T, Belda-Ferre P, Chacón M, Cheung W, Cresini ES, Eisner ER, Lastrella AL, Lawrence ES, Marotz CA, Ngo TT, Ostrander T, Plascencia A, Salido RA, Seaver P, Smoot EW, McDonald D, Neuhard RM, Scioscia AL, Satterlund AM, Simmons EH, Abelman DB, Brenner D, Bruner JC, Buckley A, Ellison M, Gattas J, Gonias SL, Hale M, Hawkins F, Ikeda L, Jhaveri H, Johnson T, Kellen V, Kremer B, Matthews G, McLawhon RW, Ouillet P, Park D, Pradenas A, Reed S, Riggs L, Sanders A, Sollenberger B, Song A, White B, Winbush T, Aceves CM, Anderson C, Gangavarapu K, Hufbauer E, Kurzban E, Lee J, Matteson NL, Parker E, Perkins SA, Ramesh KS, Robles-Sikisaka R, Schwab MA, Spencer E, Wohl S, Nicholson L, McHardy IH, Dimmock DP, Hobbs CA, Bakhtar O, Harding A, Mendoza A, Bolze A, Becker D, Cirulli ET, Isaksson M, Schiabor Barrett KM, Washington NL, Malone JD, Schafer AM, Gurfield N, Stous S, Fielding-Miller R, Garfein RS, Gaines T, Anderson C, Martin NK, Schooley R, Austin B, MacCannell DR, Kingsmore SF, Lee W, Sha… See abstract for full author list ➔ Karthikeyan S, et al. Among authors: moshiri n. Nature. 2022 Sep;609(7925):101-108. doi: 10.1038/s41586-022-05049-6. Epub 2022 Jul 7. Nature. 2022. PMID: 35798029 Free PMC article.
Ten simple rules for attending your first conference.
Leininger E, Shaw K, Moshiri N, Neiles K, Onsongo G, Ritz A. Leininger E, et al. Among authors: moshiri n. PLoS Comput Biol. 2021 Jul 15;17(7):e1009133. doi: 10.1371/journal.pcbi.1009133. eCollection 2021 Jul. PLoS Comput Biol. 2021. PMID: 34264934 Free PMC article. No abstract available.
Accelerators for Classical Molecular Dynamics Simulations of Biomolecules.
Jones D, Allen JE, Yang Y, Drew Bennett WF, Gokhale M, Moshiri N, Rosing TS. Jones D, et al. Among authors: moshiri n. J Chem Theory Comput. 2022 Jul 12;18(7):4047-4069. doi: 10.1021/acs.jctc.1c01214. Epub 2022 Jun 16. J Chem Theory Comput. 2022. PMID: 35710099 Free PMC article. Review.
SEPIA: simulation-based evaluation of prioritization algorithms.
Almaraz K, Jang T, Lewis M, Ngo T, Song M, Moshiri N. Almaraz K, et al. Among authors: moshiri n. BMC Med Inform Decis Mak. 2021 Jun 3;21(1):177. doi: 10.1186/s12911-021-01536-4. BMC Med Inform Decis Mak. 2021. PMID: 34082739 Free PMC article.
Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks.
Rule A, Birmingham A, Zuniga C, Altintas I, Huang SC, Knight R, Moshiri N, Nguyen MH, Rosenthal SB, Pérez F, Rose PW. Rule A, et al. Among authors: moshiri n. PLoS Comput Biol. 2019 Jul 25;15(7):e1007007. doi: 10.1371/journal.pcbi.1007007. eCollection 2019 Jul. PLoS Comput Biol. 2019. PMID: 31344036 Free PMC article. No abstract available.
HIV Care Prioritization Using Phylogenetic Branch Length.
Moshiri N, Smith DM, Mirarab S. Moshiri N, et al. J Acquir Immune Defic Syndr. 2021 Apr 15;86(5):626-637. doi: 10.1097/QAI.0000000000002612. J Acquir Immune Defic Syndr. 2021. PMID: 33394616 Free PMC article.
28 results