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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1997 2
2005 2
2006 4
2007 1
2008 2
2009 3
2010 2
2011 4
2012 5
2013 2
2014 3
2015 5
2016 2
2017 2
2019 2
2020 4
2021 7
2022 6
2023 2

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58 results

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Page 1
CellML 2.0.
Clerx M, Cooling MT, Cooper J, Garny A, Moyle K, Nickerson DP, Nielsen PMF, Sorby H. Clerx M, et al. Among authors: nickerson dp. J Integr Bioinform. 2020 Jul 24;17(2-3):20200021. doi: 10.1515/jib-2020-0021. J Integr Bioinform. 2020. PMID: 32759406 Free PMC article.
Best Practices for Making Reproducible Biochemical Models.
Porubsky VL, Goldberg AP, Rampadarath AK, Nickerson DP, Karr JR, Sauro HM. Porubsky VL, et al. Among authors: nickerson dp. Cell Syst. 2020 Aug 26;11(2):109-120. doi: 10.1016/j.cels.2020.06.012. Cell Syst. 2020. PMID: 32853539 Free PMC article. Review.
OMEX metadata specification (version 1.2).
Gennari JH, König M, Misirli G, Neal ML, Nickerson DP, Waltemath D. Gennari JH, et al. Among authors: nickerson dp. J Integr Bioinform. 2021 Oct 20;18(3):20210020. doi: 10.1515/jib-2021-0020. J Integr Bioinform. 2021. PMID: 34668356 Free PMC article.
SBML to bond graphs: From conversion to composition.
Shahidi N, Pan M, Tran K, Crampin EJ, Nickerson DP. Shahidi N, et al. Among authors: nickerson dp. Math Biosci. 2022 Oct;352:108901. doi: 10.1016/j.mbs.2022.108901. Epub 2022 Sep 9. Math Biosci. 2022. PMID: 36096376 Free article.
A semantics, energy-based approach to automate biomodel composition.
Shahidi N, Pan M, Tran K, Crampin EJ, Nickerson DP. Shahidi N, et al. Among authors: nickerson dp. PLoS One. 2022 Jun 3;17(6):e0269497. doi: 10.1371/journal.pone.0269497. eCollection 2022. PLoS One. 2022. PMID: 35657966 Free PMC article.
Vps-C complexes: gatekeepers of endolysosomal traffic.
Nickerson DP, Brett CL, Merz AJ. Nickerson DP, et al. Curr Opin Cell Biol. 2009 Aug;21(4):543-51. doi: 10.1016/ Epub 2009 Jul 3. Curr Opin Cell Biol. 2009. PMID: 19577915 Free PMC article. Review.
Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022.
König M, Gleeson P, Golebiewski M, Gorochowski TE, Hucka M, Keating SM, Myers CJ, Nickerson DP, Sommer B, Waltemath D, Schreiber F. König M, et al. Among authors: nickerson dp. J Integr Bioinform. 2023 Mar 29;20(1):20230004. doi: 10.1515/jib-2023-0004. eCollection 2023 Mar 1. J Integr Bioinform. 2023. PMID: 36989443 Free PMC article.
Promoting Coordinated Development of Community-Based Information Standards for Modeling in Biology: The COMBINE Initiative.
Hucka M, Nickerson DP, Bader GD, Bergmann FT, Cooper J, Demir E, Garny A, Golebiewski M, Myers CJ, Schreiber F, Waltemath D, Le Novère N. Hucka M, et al. Among authors: nickerson dp. Front Bioeng Biotechnol. 2015 Feb 24;3:19. doi: 10.3389/fbioe.2015.00019. eCollection 2015. Front Bioeng Biotechnol. 2015. PMID: 25759811 Free PMC article. Review.
58 results