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Page 1
A genome-informed higher rank classification of the biotechnologically important fungal subphylum Saccharomycotina.
Groenewald M, Hittinger CT, Bensch K, Opulente DA, Shen XX, Li Y, Liu C, LaBella AL, Zhou X, Limtong S, Jindamorakot S, Gonçalves P, Robert V, Wolfe KH, Rosa CA, Boekhout T, Čadež N, Éter G, Sampaio JP, Lachance MA, Yurkov AM, Daniel HM, Takashima M, Boundy-Mills K, Libkind D, Aoki K, Sugita T, Rokas A. Groenewald M, et al. Among authors: opulente da. Stud Mycol. 2023 Jun;105:1-22. doi: 10.3114/sim.2023.105.01. Epub 2023 May 25. Stud Mycol. 2023. PMID: 38895705 Free PMC article.
Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts.
Opulente DA, LaBella AL, Harrison MC, Wolters JF, Liu C, Li Y, Kominek J, Steenwyk JL, Stoneman HR, VanDenAvond J, Miller CR, Langdon QK, Silva M, Gonçalves C, Ubbelohde EJ, Li Y, Buh KV, Jarzyna M, Haase MAB, Rosa CA, ČCadež N, Libkind D, DeVirgilio JH, Hulfachor AB, Kurtzman CP, Sampaio JP, Gonçalves P, Zhou X, Shen XX, Groenewald M, Rokas A, Hittinger CT. Opulente DA, et al. Science. 2024 Apr 26;384(6694):eadj4503. doi: 10.1126/science.adj4503. Epub 2024 Apr 26. Science. 2024. PMID: 38662846 Free PMC article.
Saccharomycotina yeasts defy long-standing macroecological patterns.
David KT, Harrison MC, Opulente DA, LaBella AL, Wolters JF, Zhou X, Shen XX, Groenewald M, Pennell M, Hittinger CT, Rokas A. David KT, et al. Among authors: opulente da. Proc Natl Acad Sci U S A. 2024 Mar 5;121(10):e2316031121. doi: 10.1073/pnas.2316031121. Epub 2024 Feb 27. Proc Natl Acad Sci U S A. 2024. PMID: 38412132 Free PMC article.
Saccharomycotina yeasts defy longstanding macroecological patterns.
David KT, Harrison MC, Opulente DA, LaBella AL, Wolters JF, Zhou X, Shen XX, Groenewald M, Pennell M, Hittinger CT, Rokas A. David KT, et al. Among authors: opulente da. bioRxiv [Preprint]. 2023 Aug 31:2023.08.29.555417. doi: 10.1101/2023.08.29.555417. bioRxiv. 2023. Update in: Proc Natl Acad Sci U S A. 2024 Mar 5;121(10):e2316031121. doi: 10.1073/pnas.2316031121. PMID: 37693602 Free PMC article. Updated. Preprint.
Eukaryotic Acquisition of a Bacterial Operon.
Kominek J, Doering DT, Opulente DA, Shen XX, Zhou X, DeVirgilio J, Hulfachor AB, Groenewald M, Mcgee MA, Karlen SD, Kurtzman CP, Rokas A, Hittinger CT. Kominek J, et al. Among authors: opulente da. Cell. 2019 Mar 7;176(6):1356-1366.e10. doi: 10.1016/j.cell.2019.01.034. Epub 2019 Feb 21. Cell. 2019. PMID: 30799038 Free PMC article.
Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum.
Shen XX, Opulente DA, Kominek J, Zhou X, Steenwyk JL, Buh KV, Haase MAB, Wisecaver JH, Wang M, Doering DT, Boudouris JT, Schneider RM, Langdon QK, Ohkuma M, Endoh R, Takashima M, Manabe RI, Čadež N, Libkind D, Rosa CA, DeVirgilio J, Hulfachor AB, Groenewald M, Kurtzman CP, Hittinger CT, Rokas A. Shen XX, et al. Among authors: opulente da. Cell. 2018 Nov 29;175(6):1533-1545.e20. doi: 10.1016/j.cell.2018.10.023. Epub 2018 Nov 8. Cell. 2018. PMID: 30415838 Free PMC article.
Substrate, temperature, and geographical patterns among nearly 2000 natural yeast isolates.
Spurley WJ, Fisher KJ, Langdon QK, Buh KV, Jarzyna M, Haase MAB, Sylvester K, Moriarty RV, Rodriguez D, Sheddan A, Wright S, Sorlie L, Hulfachor AB, Opulente DA, Hittinger CT. Spurley WJ, et al. Among authors: opulente da. Yeast. 2022 Jan;39(1-2):55-68. doi: 10.1002/yea.3679. Epub 2021 Nov 15. Yeast. 2022. PMID: 34741351 Free PMC article.
43 results