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Allosteric Control of Structural Mimicry and Mutational Escape in the SARS-CoV-2 Spike Protein Complexes with the ACE2 Decoys and Miniprotein Inhibitors: A Network-Based Approach for Mutational Profiling of Binding and Signaling.
Verkhivker GM, Agajanian S, Oztas DY, Gupta G. Verkhivker GM, et al. Among authors: oztas dy. J Chem Inf Model. 2021 Oct 25;61(10):5172-5191. doi: 10.1021/acs.jcim.1c00766. Epub 2021 Sep 22. J Chem Inf Model. 2021. PMID: 34551245
Comparative Perturbation-Based Modeling of the SARS-CoV-2 Spike Protein Binding with Host Receptor and Neutralizing Antibodies: Structurally Adaptable Allosteric Communication Hotspots Define Spike Sites Targeted by Global Circulating Mutations.
Verkhivker GM, Agajanian S, Oztas DY, Gupta G. Verkhivker GM, et al. Among authors: oztas dy. Biochemistry. 2021 May 18;60(19):1459-1484. doi: 10.1021/acs.biochem.1c00139. Epub 2021 Apr 26. Biochemistry. 2021. PMID: 33900725