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Page 1
All-atom virus simulations.
Hadden JA, Perilla JR. Hadden JA, et al. Among authors: perilla jr. Curr Opin Virol. 2018 Aug;31:82-91. doi: 10.1016/j.coviro.2018.08.007. Epub 2018 Sep 1. Curr Opin Virol. 2018. PMID: 30181049 Free PMC article. Review.
Molecular Architecture of the Retroviral Capsid.
Perilla JR, Gronenborn AM. Perilla JR, et al. Trends Biochem Sci. 2016 May;41(5):410-420. doi: 10.1016/j.tibs.2016.02.009. Epub 2016 Mar 30. Trends Biochem Sci. 2016. PMID: 27039020 Free PMC article. Review.
Computational structural biology: Evolution of the field.
Hadden-Perilla JA, Perilla JR. Hadden-Perilla JA, et al. Among authors: perilla jr. J Struct Biol. 2024 Sep;216(3):108055. doi: 10.1016/j.jsb.2023.108055. Epub 2023 Dec 12. J Struct Biol. 2024. PMID: 38097149 No abstract available.
Structural basis of HIV-1 maturation inhibitor binding and activity.
Sarkar S, Zadrozny KK, Zadorozhnyi R, Russell RW, Quinn CM, Kleinpeter A, Ablan S, Meshkin H, Perilla JR, Freed EO, Ganser-Pornillos BK, Pornillos O, Gronenborn AM, Polenova T. Sarkar S, et al. Among authors: perilla jr. Nat Commun. 2023 Mar 4;14(1):1237. doi: 10.1038/s41467-023-36569-y. Nat Commun. 2023. PMID: 36871077 Free PMC article.
Molecular dynamics simulations of large macromolecular complexes.
Perilla JR, Goh BC, Cassidy CK, Liu B, Bernardi RC, Rudack T, Yu H, Wu Z, Schulten K. Perilla JR, et al. Curr Opin Struct Biol. 2015 Apr;31:64-74. doi: 10.1016/j.sbi.2015.03.007. Epub 2015 Apr 4. Curr Opin Struct Biol. 2015. PMID: 25845770 Free PMC article. Review.
The capsid lattice engages a bipartite NUP153 motif to mediate nuclear entry of HIV-1 cores.
Shen Q, Kumari S, Xu C, Jang S, Shi J, Burdick RC, Levintov L, Xiong Q, Wu C, Devarkar SC, Tian T, Tripler TN, Hu Y, Yuan S, Temple J, Feng Q, Lusk CP, Aiken C, Engelman AN, Perilla JR, Pathak VK, Lin C, Xiong Y. Shen Q, et al. Among authors: perilla jr. Proc Natl Acad Sci U S A. 2023 Mar 28;120(13):e2202815120. doi: 10.1073/pnas.2202815120. Epub 2023 Mar 21. Proc Natl Acad Sci U S A. 2023. PMID: 36943880 Free PMC article.
Molecular dynamics of the viral life cycle: progress and prospects.
Jones PE, Pérez-Segura C, Bryer AJ, Perilla JR, Hadden-Perilla JA. Jones PE, et al. Among authors: perilla jr. Curr Opin Virol. 2021 Oct;50:128-138. doi: 10.1016/j.coviro.2021.08.003. Epub 2021 Aug 28. Curr Opin Virol. 2021. PMID: 34464843 Free PMC article. Review.
61 results