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Digestomics: an emerging strategy for comprehensive analysis of protein catabolism.

Bingeman TS, Perlman DH, Storey DG, Lewis IA. Bingeman TS, et al. Among authors: perlman dh. Curr Opin Biotechnol. 2017 Feb;43:134-140. doi: 10.1016/j.copbio.2016.11.004. Epub 2016 Dec 23. Curr Opin Biotechnol. 2017. PMID: 28025112 Review.

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Bisphosphoglycerate mutase controls serine pathway flux via 3-phosphoglycerate.

Oslund RC, Su X, Haugbro M, Kee JM, Esposito M, David Y, Wang B, Ge E, Perlman DH, Kang Y, Muir TW, Rabinowitz JD. Oslund RC, et al. Among authors: perlman dh. Nat Chem Biol. 2017 Oct;13(10):1081-1087. doi: 10.1038/nchembio.2453. Epub 2017 Aug 7. Nat Chem Biol. 2017. PMID: 28805803 Free PMC article.

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Systems-level analysis of mechanisms regulating yeast metabolic flux.

Hackett SR, Zanotelli VR, Xu W, Goya J, Park JO, Perlman DH, Gibney PA, Botstein D, Storey JD, Rabinowitz JD. Hackett SR, et al. Among authors: perlman dh. Science. 2016 Oct 28;354(6311):aaf2786. doi: 10.1126/science.aaf2786. Epub 2016 Oct 27. Science. 2016. PMID: 27789812 Free PMC article.

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Redox regulation of sirtuin-1 by S-glutathiolation.

Zee RS, Yoo CB, Pimentel DR, Perlman DH, Burgoyne JR, Hou X, McComb ME, Costello CE, Cohen RA, Bachschmid MM. Zee RS, et al. Among authors: perlman dh. Antioxid Redox Signal. 2010 Oct 1;13(7):1023-32. doi: 10.1089/ars.2010.3251. Antioxid Redox Signal. 2010. PMID: 20392170 Free PMC article.

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Mitotic Control of Planar Cell Polarity by Polo-like Kinase 1.

Shrestha R, Little KA, Tamayo JV, Li W, Perlman DH, Devenport D. Shrestha R, et al. Among authors: perlman dh. Dev Cell. 2015 Jun 8;33(5):522-34. doi: 10.1016/j.devcel.2015.03.024. Epub 2015 May 21. Dev Cell. 2015. PMID: 26004507 Free PMC article.

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Calpain A modulates Toll responses by limited Cactus/IκB proteolysis.

Fontenele M, Lim B, Oliveira D, Buffolo M, Perlman DH, Schupbach T, Araujo H. Fontenele M, et al. Among authors: perlman dh. Mol Biol Cell. 2013 Sep;24(18):2966-80. doi: 10.1091/mbc.E13-02-0113. Epub 2013 Jul 17. Mol Biol Cell. 2013. PMID: 23864715 Free PMC article.

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Inositol polyphosphates intersect with signaling and metabolic networks via two distinct mechanisms.

Wu M, Chong LS, Perlman DH, Resnick AC, Fiedler D. Wu M, et al. Among authors: perlman dh. Proc Natl Acad Sci U S A. 2016 Nov 1;113(44):E6757-E6765. doi: 10.1073/pnas.1606853113. Epub 2016 Oct 19. Proc Natl Acad Sci U S A. 2016. PMID: 27791083 Free PMC article.

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Human cytomegalovirus pUL97 kinase induces global changes in the infected cell phosphoproteome.

Oberstein A, Perlman DH, Shenk T, Terry LJ. Oberstein A, et al. Among authors: perlman dh. Proteomics. 2015 Jun;15(12):2006-22. doi: 10.1002/pmic.201400607. Epub 2015 May 12. Proteomics. 2015. PMID: 25867546 Free PMC article.

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Cryptic protein-protein interaction motifs in the cytoplasmic domain of MHCI proteins.

Frietze KK, Pappy AL 2nd, Melson JW, O'Driscoll EE, Tyler CM, Perlman DH, Boulanger LM. Frietze KK, et al. Among authors: perlman dh. BMC Immunol. 2016 Jul 19;17(1):24. doi: 10.1186/s12865-016-0154-z. BMC Immunol. 2016. PMID: 27435737 Free PMC article.

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Proteome-wide analysis reveals widespread lysine acetylation of major protein complexes in the malaria parasite.

Cobbold SA, Santos JM, Ochoa A, Perlman DH, Llinás M. Cobbold SA, et al. Among authors: perlman dh. Sci Rep. 2016 Jan 27;6:19722. doi: 10.1038/srep19722. Sci Rep. 2016. PMID: 26813983 Free PMC article.

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