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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2012 1
2013 1
2015 1
2016 2
2017 3
2018 2
2019 3
2020 11
2021 12
2022 7
2023 4

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46 results

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Page 1
Ten simple rules for making training materials FAIR.
Garcia L, Batut B, Burke ML, Kuzak M, Psomopoulos F, Arcila R, Attwood TK, Beard N, Carvalho-Silva D, Dimopoulos AC, Del Angel VD, Dumontier M, Gurwitz KT, Krause R, McQuilton P, Le Pera L, Morgan SL, Rauste P, Via A, Kahlem P, Rustici G, van Gelder CWG, Palagi PM. Garcia L, et al. Among authors: psomopoulos f. PLoS Comput Biol. 2020 May 21;16(5):e1007854. doi: 10.1371/journal.pcbi.1007854. eCollection 2020 May. PLoS Comput Biol. 2020. PMID: 32437350 Free PMC article.
IgIDivA: immunoglobulin intraclonal diversification analysis.
Zaragoza-Infante L, Junet V, Pechlivanis N, Fragkouli SC, Amprachamian S, Koletsa T, Chatzidimitriou A, Papaioannou M, Stamatopoulos K, Agathangelidis A, Psomopoulos F. Zaragoza-Infante L, et al. Among authors: psomopoulos f. Brief Bioinform. 2022 Sep 20;23(5):bbac349. doi: 10.1093/bib/bbac349. Brief Bioinform. 2022. PMID: 36044248 Free PMC article.
Introducing the FAIR Principles for research software.
Barker M, Chue Hong NP, Katz DS, Lamprecht AL, Martinez-Ortiz C, Psomopoulos F, Harrow J, Castro LJ, Gruenpeter M, Martinez PA, Honeyman T. Barker M, et al. Among authors: psomopoulos f. Sci Data. 2022 Oct 14;9(1):622. doi: 10.1038/s41597-022-01710-x. Sci Data. 2022. PMID: 36241754 Free PMC article.
Stereotyped B Cell Receptor Immunoglobulins in B Cell Lymphomas.
Agathangelidis A, Psomopoulos F, Stamatopoulos K. Agathangelidis A, et al. Among authors: psomopoulos f. Methods Mol Biol. 2019;1956:139-155. doi: 10.1007/978-1-4939-9151-8_7. Methods Mol Biol. 2019. PMID: 30779034 Review.
Purpose-Built Immunoinformatics for BcR IG/TR Repertoire Data Analysis.
Galigalidou C, Zaragoza-Infante L, Chatzidimitriou A, Stamatopoulos K, Psomopoulos F, Agathangelidis A. Galigalidou C, et al. Among authors: psomopoulos f. Methods Mol Biol. 2022;2453:585-603. doi: 10.1007/978-1-0716-2115-8_27. Methods Mol Biol. 2022. PMID: 35622343 Free PMC article.
Galaxy Training: A powerful framework for teaching!
Hiltemann S, Rasche H, Gladman S, Hotz HR, Larivière D, Blankenberg D, Jagtap PD, Wollmann T, Bretaudeau A, Goué N, Griffin TJ, Royaux C, Le Bras Y, Mehta S, Syme A, Coppens F, Droesbeke B, Soranzo N, Bacon W, Psomopoulos F, Gallardo-Alba C, Davis J, Föll MC, Fahrner M, Doyle MA, Serrano-Solano B, Fouilloux AC, van Heusden P, Maier W, Clements D, Heyl F; Galaxy Training Network; Grüning B, Batut B. Hiltemann S, et al. Among authors: psomopoulos f. PLoS Comput Biol. 2023 Jan 9;19(1):e1010752. doi: 10.1371/journal.pcbi.1010752. eCollection 2023 Jan. PLoS Comput Biol. 2023. PMID: 36622853 Free PMC article.
TRIP - T cell receptor/immunoglobulin profiler.
Kotouza MT, Gemenetzi K, Galigalidou C, Vlachonikola E, Pechlivanis N, Agathangelidis A, Sandaltzopoulos R, Mitkas PA, Stamatopoulos K, Chatzidimitriou A, Psomopoulos FE; Hellenic Precision Medicine Network in Oncology. Kotouza MT, et al. Among authors: psomopoulos fe. BMC Bioinformatics. 2020 Sep 29;21(1):422. doi: 10.1186/s12859-020-03669-1. BMC Bioinformatics. 2020. PMID: 32993478 Free PMC article.
Eleven quick tips for finding research data.
Gregory K, Khalsa SJ, Michener WK, Psomopoulos FE, de Waard A, Wu M. Gregory K, et al. Among authors: psomopoulos fe. PLoS Comput Biol. 2018 Apr 12;14(4):e1006038. doi: 10.1371/journal.pcbi.1006038. eCollection 2018 Apr. PLoS Comput Biol. 2018. PMID: 29649206 Free PMC article. No abstract available.
miRkit: R framework analyzing miRNA PCR array data.
Tsagiopoulou M, Togkousidis A, Pechlivanis N, Maniou MC, Batsali A, Matheakakis A, Pontikoglou C, Psomopoulos F. Tsagiopoulou M, et al. Among authors: psomopoulos f. BMC Res Notes. 2021 Sep 26;14(1):376. doi: 10.1186/s13104-021-05788-1. BMC Res Notes. 2021. PMID: 34565441 Free PMC article.
DOME: recommendations for supervised machine learning validation in biology.
Walsh I, Fishman D, Garcia-Gasulla D, Titma T, Pollastri G; ELIXIR Machine Learning Focus Group; Harrow J, Psomopoulos FE, Tosatto SCE. Walsh I, et al. Among authors: psomopoulos fe. Nat Methods. 2021 Oct;18(10):1122-1127. doi: 10.1038/s41592-021-01205-4. Nat Methods. 2021. PMID: 34316068 Free article. No abstract available.
46 results