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Haplotype associated RNA expression (HARE) improves prediction of complex traits in maize.

Giri A, Khaipho-Burch M, Buckler ES, Ramstein GP. Giri A, et al. Among authors: ramstein gp. PLoS Genet. 2021 Oct 4;17(10):e1009568. doi: 10.1371/journal.pgen.1009568. eCollection 2021 Oct. PLoS Genet. 2021. PMID: 34606492 Free PMC article.

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Breaking the curse of dimensionality to identify causal variants in Breeding 4.

Ramstein GP, Jensen SE, Buckler ES. Ramstein GP, et al. Theor Appl Genet. 2019 Mar;132(3):559-567. doi: 10.1007/s00122-018-3267-3. Epub 2018 Dec 13. Theor Appl Genet. 2019. PMID: 30547185 Free PMC article. Review.

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High-resolution genome-wide association study pinpoints metal transporter and chelator genes involved in the genetic control of element levels in maize grain.

Wu D, Tanaka R, Li X, Ramstein GP, Cu S, Hamilton JP, Buell CR, Stangoulis J, Rocheford T, Gore MA. Wu D, et al. Among authors: ramstein gp. G3 (Bethesda). 2021 Apr 15;11(4):jkab059. doi: 10.1093/g3journal/jkab059. G3 (Bethesda). 2021. PMID: 33677522 Free PMC article.

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A sorghum practical haplotype graph facilitates genome-wide imputation and cost-effective genomic prediction.

Jensen SE, Charles JR, Muleta K, Bradbury PJ, Casstevens T, Deshpande SP, Gore MA, Gupta R, Ilut DC, Johnson L, Lozano R, Miller Z, Ramu P, Rathore A, Romay MC, Upadhyaya HD, Varshney RK, Morris GP, Pressoir G, Buckler ES, Ramstein GP. Jensen SE, et al. Among authors: ramstein gp. Plant Genome. 2020 Mar;13(1):e20009. doi: 10.1002/tpg2.20009. Epub 2020 Mar 25. Plant Genome. 2020. PMID: 33016627 Free article.

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Dominance Effects and Functional Enrichments Improve Prediction of Agronomic Traits in Hybrid Maize.

Ramstein GP, Larsson SJ, Cook JP, Edwards JW, Ersoz ES, Flint-Garcia S, Gardner CA, Holland JB, Lorenz AJ, McMullen MD, Millard MJ, Rocheford TR, Tuinstra MR, Bradbury PJ, Buckler ES, Romay MC. Ramstein GP, et al. Genetics. 2020 May;215(1):215-230. doi: 10.1534/genetics.120.303025. Epub 2020 Mar 9. Genetics. 2020. PMID: 32152047 Free PMC article.

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Extensions of BLUP Models for Genomic Prediction in Heterogeneous Populations: Application in a Diverse Switchgrass Sample.

Ramstein GP, Casler MD. Ramstein GP, et al. G3 (Bethesda). 2019 Mar 7;9(3):789-805. doi: 10.1534/g3.118.200969. G3 (Bethesda). 2019. PMID: 30651285 Free PMC article.

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Genome-Wide Association Study in Pseudo-F₂ Populations of Switchgrass Identifies Genetic Loci Affecting Heading and Anthesis Dates.

Taylor M, Tornqvist CE, Zhao X, Grabowski P, Doerge R, Ma J, Volenec J, Evans J, Ramstein GP, Sanciangco MD, Buell CR, Casler MD, Jiang Y. Taylor M, et al. Among authors: ramstein gp. Front Plant Sci. 2018 Sep 13;9:1250. doi: 10.3389/fpls.2018.01250. eCollection 2018. Front Plant Sci. 2018. PMID: 30271414 Free PMC article.

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Integrating GWAS and TWAS to elucidate the genetic architecture of maize leaf cuticular conductance.

Lin M, Qiao P, Matschi S, Vasquez M, Ramstein GP, Bourgault R, Mohammadi M, Scanlon MJ, Molina I, Smith LG, Gore MA. Lin M, et al. Among authors: ramstein gp. Plant Physiol. 2022 May 4:kiac198. doi: 10.1093/plphys/kiac198. Online ahead of print. Plant Physiol. 2022. PMID: 35512195 Free article.

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Candidate Variants for Additive and Interactive Effects on Bioenergy Traits in Switchgrass (Panicum virgatum L.) Identified by Genome-Wide Association Analyses.

Ramstein GP, Evans J, Nandety A, Saha MC, Brummer EC, Kaeppler SM, Buell CR, Casler MD. Ramstein GP, et al. Plant Genome. 2018 Nov;11(3). doi: 10.3835/plantgenome2018.01.0002. Plant Genome. 2018. PMID: 30512032 Free article.

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Accuracy of Genomic Prediction in Switchgrass (Panicum virgatum L.) Improved by Accounting for Linkage Disequilibrium.

Ramstein GP, Evans J, Kaeppler SM, Mitchell RB, Vogel KP, Buell CR, Casler MD. Ramstein GP, et al. G3 (Bethesda). 2016 Apr 7;6(4):1049-62. doi: 10.1534/g3.115.024950. G3 (Bethesda). 2016. PMID: 26869619 Free PMC article.

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