Ruffolo JA[au] - Search Results

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Year	Number of Results
2020	2
2021	1
2022	2

Page 1

Modeling of lamprey reticulospinal neurons: multiple distinct parameter sets yield realistic simulations.

Ruffolo JA, McClellan AD. Ruffolo JA, et al. J Neurophysiol. 2020 Sep 1;124(3):895-913. doi: 10.1152/jn.00070.2020. Epub 2020 Jul 22. J Neurophysiol. 2020. PMID: 32697608 Free article.

Geometric potentials from deep learning improve prediction of CDR H3 loop structures.

Ruffolo JA, Guerra C, Mahajan SP, Sulam J, Gray JJ. Ruffolo JA, et al. Bioinformatics. 2020 Jul 1;36(Suppl_1):i268-i275. doi: 10.1093/bioinformatics/btaa457. Bioinformatics. 2020. PMID: 32657412 Free PMC article.

Antibody structure prediction using interpretable deep learning.

Ruffolo JA, Sulam J, Gray JJ. Ruffolo JA, et al. Patterns (N Y). 2021 Dec 9;3(2):100406. doi: 10.1016/j.patter.2021.100406. eCollection 2022 Feb 11. Patterns (N Y). 2021. PMID: 35199061 Free PMC article.

Simultaneous prediction of antibody backbone and side-chain conformations with deep learning.

Akpinaroglu D, Ruffolo JA, Mahajan SP, Gray JJ. Akpinaroglu D, et al. Among authors: ruffolo ja. PLoS One. 2022 Jun 15;17(6):e0258173. doi: 10.1371/journal.pone.0258173. eCollection 2022. PLoS One. 2022. PMID: 35704640 Free PMC article.

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