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Year Number of Results
2015 4
2017 1
2018 1
2019 1
2020 3
2021 4
2022 8
2023 3

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24 results

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Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease.
Zhou P, Song G, Liu H, Yuan M, He WT, Beutler N, Zhu X, Tse LV, Martinez DR, Schäfer A, Anzanello F, Yong P, Peng L, Dueker K, Musharrafieh R, Callaghan S, Capozzola T, Limbo O, Parren M, Garcia E, Rawlings SA, Smith DM, Nemazee D, Jardine JG, Safonova Y, Briney B, Rogers TF, Wilson IA, Baric RS, Gralinski LE, Burton DR, Andrabi R. Zhou P, et al. Among authors: safonova y. Immunity. 2023 Mar 14;56(3):669-686.e7. doi: 10.1016/j.immuni.2023.02.005. Epub 2023 Feb 16. Immunity. 2023. PMID: 36889306 Free PMC article.
IgSimulator: a versatile immunosequencing simulator.
Safonova Y, Lapidus A, Lill J. Safonova Y, et al. Bioinformatics. 2015 Oct 1;31(19):3213-5. doi: 10.1093/bioinformatics/btv326. Epub 2015 May 25. Bioinformatics. 2015. PMID: 26007226
Gene prediction in the immunoglobulin loci.
Sirupurapu V, Safonova Y, Pevzner PA. Sirupurapu V, et al. Among authors: safonova y. Genome Res. 2022 Jun;32(6):1152-1169. doi: 10.1101/gr.276676.122. Epub 2022 May 11. Genome Res. 2022. PMID: 35545447 Free PMC article.
Trace Reconstruction Problems in Computational Biology.
Bhardwaj V, Pevzner PA, Rashtchian C, Safonova Y. Bhardwaj V, et al. Among authors: safonova y. IEEE Trans Inf Theory. 2021 Jun;67(6):3295-3314. doi: 10.1109/tit.2020.3030569. Epub 2020 Oct 13. IEEE Trans Inf Theory. 2021. PMID: 34176957 Free PMC article.
Diversity in immunogenomics: the value and the challenge.
Peng K, Safonova Y, Shugay M, Popejoy AB, Rodriguez OL, Breden F, Brodin P, Burkhardt AM, Bustamante C, Cao-Lormeau VM, Corcoran MM, Duffy D, Fuentes-Guajardo M, Fujita R, Greiff V, Jönsson VD, Liu X, Quintana-Murci L, Rossetti M, Xie J, Yaari G, Zhang W, Abedalthagafi MS, Adekoya KO, Ahmed RA, Chang WC, Gray C, Nakamura Y, Lees WD, Khatri P, Alachkar H, Scheepers C, Watson CT, Karlsson Hedestam GB, Mangul S. Peng K, et al. Among authors: safonova y. Nat Methods. 2021 Jun;18(6):588-591. doi: 10.1038/s41592-021-01169-5. Nat Methods. 2021. PMID: 34002093 Free PMC article.
Targeted isolation of diverse human protective broadly neutralizing antibodies against SARS-like viruses.
He WT, Musharrafieh R, Song G, Dueker K, Tse LV, Martinez DR, Schäfer A, Callaghan S, Yong P, Beutler N, Torres JL, Volk RM, Zhou P, Yuan M, Liu H, Anzanello F, Capozzola T, Parren M, Garcia E, Rawlings SA, Smith DM, Wilson IA, Safonova Y, Ward AB, Rogers TF, Baric RS, Gralinski LE, Burton DR, Andrabi R. He WT, et al. Among authors: safonova y. Nat Immunol. 2022 Jun;23(6):960-970. doi: 10.1038/s41590-022-01222-1. Epub 2022 Jun 2. Nat Immunol. 2022. PMID: 35654851 Free PMC article.
24 results