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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1960 1
1988 1
1993 1
1994 2
1995 2
1996 2
1999 2
2000 1
2001 1
2004 2
2005 1
2006 1
2007 1
2008 1
2009 5
2010 3
2011 6
2012 3
2013 2
2014 4
2015 7
2016 5
2017 12
2018 2
2019 4
2020 9
2021 5
2022 3
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Article type
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Search Results

81 results
Results by year
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Page 1
Shotgun metagenomics, from sampling to analysis.
Quince C, Walker AW, Simpson JT, Loman NJ, Segata N. Quince C, et al. Among authors: simpson jt. Nat Biotechnol. 2017 Sep 12;35(9):833-844. doi: 10.1038/nbt.3935. Nat Biotechnol. 2017. PMID: 28898207 Review.
Nanopore sequencing and assembly of a human genome with ultra-long reads.
Jain M, Koren S, Miga KH, Quick J, Rand AC, Sasani TA, Tyson JR, Beggs AD, Dilthey AT, Fiddes IT, Malla S, Marriott H, Nieto T, O'Grady J, Olsen HE, Pedersen BS, Rhie A, Richardson H, Quinlan AR, Snutch TP, Tee L, Paten B, Phillippy AM, Simpson JT, Loman NJ, Loose M. Jain M, et al. Among authors: simpson jt. Nat Biotechnol. 2018 Apr;36(4):338-345. doi: 10.1038/nbt.4060. Epub 2018 Jan 29. Nat Biotechnol. 2018. PMID: 29431738 Free PMC article.
Nanopore native RNA sequencing of a human poly(A) transcriptome.
Workman RE, Tang AD, Tang PS, Jain M, Tyson JR, Razaghi R, Zuzarte PC, Gilpatrick T, Payne A, Quick J, Sadowski N, Holmes N, de Jesus JG, Jones KL, Soulette CM, Snutch TP, Loman N, Paten B, Loose M, Simpson JT, Olsen HE, Brooks AN, Akeson M, Timp W. Workman RE, et al. Among authors: simpson jt. Nat Methods. 2019 Dec;16(12):1297-1305. doi: 10.1038/s41592-019-0617-2. Epub 2019 Nov 18. Nat Methods. 2019. PMID: 31740818 Free PMC article.
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples.
Bailey MH, Meyerson WU, Dursi LJ, Wang LB, Dong G, Liang WW, Weerasinghe A, Li S, Li Y, Kelso S; MC3 Working Group; PCAWG novel somatic mutation calling methods working group, Saksena G, Ellrott K, Wendl MC, Wheeler DA, Getz G, Simpson JT, Gerstein MB, Ding L; PCAWG Consortium. Bailey MH, et al. Among authors: simpson jt. Nat Commun. 2020 Sep 21;11(1):4748. doi: 10.1038/s41467-020-18151-y. Nat Commun. 2020. PMID: 32958763 Free PMC article.
Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples.
Quick J, Grubaugh ND, Pullan ST, Claro IM, Smith AD, Gangavarapu K, Oliveira G, Robles-Sikisaka R, Rogers TF, Beutler NA, Burton DR, Lewis-Ximenez LL, de Jesus JG, Giovanetti M, Hill SC, Black A, Bedford T, Carroll MW, Nunes M, Alcantara LC Jr, Sabino EC, Baylis SA, Faria NR, Loose M, Simpson JT, Pybus OG, Andersen KG, Loman NJ. Quick J, et al. Among authors: simpson jt. Nat Protoc. 2017 Jun;12(6):1261-1276. doi: 10.1038/nprot.2017.066. Epub 2017 May 24. Nat Protoc. 2017. PMID: 28538739 Free PMC article.
New Twists in Detecting mRNA Modification Dynamics.
Anreiter I, Mir Q, Simpson JT, Janga SC, Soller M. Anreiter I, et al. Among authors: simpson jt. Trends Biotechnol. 2021 Jan;39(1):72-89. doi: 10.1016/j.tibtech.2020.06.002. Epub 2020 Jul 1. Trends Biotechnol. 2021. PMID: 32620324 Free PMC article. Review.
Revealing nascent RNA processing dynamics with nano-COP.
Drexler HL, Choquet K, Merens HE, Tang PS, Simpson JT, Churchman LS. Drexler HL, et al. Among authors: simpson jt. Nat Protoc. 2021 Mar;16(3):1343-1375. doi: 10.1038/s41596-020-00469-y. Epub 2021 Jan 29. Nat Protoc. 2021. PMID: 33514943 Free PMC article.
Detection of Structural Rearrangements in Embryos.
Madjunkova S, Sundaravadanam Y, Antes R, Abramov R, Chen S, Yin Y, Zuzarte PC, Moskovtsev SI, Jorgensen LGT, Baratz A, Simpson JT, Librach C. Madjunkova S, et al. Among authors: simpson jt. N Engl J Med. 2020 Jun 18;382(25):2472-2474. doi: 10.1056/NEJMc1913370. N Engl J Med. 2020. PMID: 32558475 No abstract available.
81 results