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UMIc: A Preprocessing Method for UMI Deduplication and Reads Correction.
Tsagiopoulou M, Maniou MC, Pechlivanis N, Togkousidis A, Kotrová M, Hutzenlaub T, Kappas I, Chatzidimitriou A, Psomopoulos F. Tsagiopoulou M, et al. Among authors: togkousidis a. Front Genet. 2021 May 28;12:660366. doi: 10.3389/fgene.2021.660366. eCollection 2021. Front Genet. 2021. PMID: 34122513 Free PMC article.
miRkit: R framework analyzing miRNA PCR array data.
Tsagiopoulou M, Togkousidis A, Pechlivanis N, Maniou MC, Batsali A, Matheakakis A, Pontikoglou C, Psomopoulos F. Tsagiopoulou M, et al. Among authors: togkousidis a. BMC Res Notes. 2021 Sep 26;14(1):376. doi: 10.1186/s13104-021-05788-1. BMC Res Notes. 2021. PMID: 34565441 Free PMC article.
Detecting SARS-CoV-2 lineages and mutational load in municipal wastewater and a use-case in the metropolitan area of Thessaloniki, Greece.
Pechlivanis N, Tsagiopoulou M, Maniou MC, Togkousidis A, Mouchtaropoulou E, Chassalevris T, Chaintoutis SC, Petala M, Kostoglou M, Karapantsios T, Laidou S, Vlachonikola E, Chatzidimitriou A, Papadopoulos A, Papaioannou N, Dovas CI, Argiriou A, Psomopoulos F. Pechlivanis N, et al. Among authors: togkousidis a. Sci Rep. 2022 Feb 17;12(1):2659. doi: 10.1038/s41598-022-06625-6. Sci Rep. 2022. PMID: 35177697 Free PMC article.