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Page 1
Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort.
Qin Y, Havulinna AS, Liu Y, Jousilahti P, Ritchie SC, Tokolyi A, Sanders JG, Valsta L, Brożyńska M, Zhu Q, Tripathi A, Vázquez-Baeza Y, Loomba R, Cheng S, Jain M, Niiranen T, Lahti L, Knight R, Salomaa V, Inouye M, Méric G. Qin Y, et al. Among authors: tokolyi a. Nat Genet. 2022 Feb;54(2):134-142. doi: 10.1038/s41588-021-00991-z. Epub 2022 Feb 3. Nat Genet. 2022. PMID: 35115689 Free PMC article.
Phenotypic complexities of rare heterozygous neurexin-1 deletions.
Fernando MB, Fan Y, Zhang Y, Tokolyi A, Murphy AN, Kammourh S, Michael Deans PJ, Ghorbani S, Onatzevitch R, Pero A, Padilla C, Williams S, Flaherty EK, Prytkova IA, Cao L, Knowles DA, Fang G, Slesinger PA, Brennand KJ. Fernando MB, et al. Among authors: tokolyi a. bioRxiv [Preprint]. 2024 Nov 1:2023.10.28.564543. doi: 10.1101/2023.10.28.564543. bioRxiv. 2024. PMID: 37961635 Free PMC article. Preprint.
Author Correction: Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort.
Qin Y, Havulinna AS, Liu Y, Jousilahti P, Ritchie SC, Tokolyi A, Sanders JG, Valsta L, Brożyńska M, Zhu Q, Tripathi A, Vázquez-Baeza Y, Loomba R, Cheng S, Jain M, Niiranen T, Lahti L, Knight R, Salomaa V, Inouye M, Méric G. Qin Y, et al. Among authors: tokolyi a. Nat Genet. 2024 Mar;56(3):554. doi: 10.1038/s41588-024-01693-y. Nat Genet. 2024. PMID: 38424462 No abstract available.
Linear plasmids in Klebsiella and other Enterobacteriaceae.
Hawkey J, Cottingham H, Tokolyi A, Wick RR, Judd LM, Cerdeira L, de Oliveira Garcia D, Wyres KL, Holt KE. Hawkey J, et al. Among authors: tokolyi a. Microb Genom. 2022 Apr;8(4):000807. doi: 10.1099/mgen.0.000807. Microb Genom. 2022. PMID: 35416146 Free PMC article.
3D-cardiomics: A spatial transcriptional atlas of the mammalian heart.
Mohenska M, Tan NM, Tokolyi A, Furtado MB, Costa MW, Perry AJ, Hatwell-Humble J, van Duijvenboden K, Nim HT, Ji YMM, Charitakis N, Bienroth D, Bolk F, Vivien C, Knaupp AS, Powell DR, Elliott DA, Porrello ER, Nilsson SK, Del Monte-Nieto G, Rosenthal NA, Rossello FJ, Polo JM, Ramialison M. Mohenska M, et al. Among authors: tokolyi a. J Mol Cell Cardiol. 2022 Feb;163:20-32. doi: 10.1016/j.yjmcc.2021.09.011. Epub 2021 Oct 5. J Mol Cell Cardiol. 2022. PMID: 34624332
Misexpression of inactive genes in whole blood is associated with nearby rare structural variants.
Vanderstichele T, Burnham KL, de Klein N, Tardaguila M, Howell B, Walter K, Kundu K, Koeppel J, Lee W, Tokolyi A, Persyn E, Nath AP, Marten J, Petrovski S, Roberts DJ, Di Angelantonio E, Danesh J, Berton A, Platt A, Butterworth AS, Soranzo N, Parts L, Inouye M, Paul DS, Davenport EE. Vanderstichele T, et al. Among authors: tokolyi a. Am J Hum Genet. 2024 Aug 8;111(8):1524-1543. doi: 10.1016/j.ajhg.2024.06.017. Epub 2024 Jul 24. Am J Hum Genet. 2024. PMID: 39053458 Free PMC article.
The common VTE-protective G haplotype of F5 increases factor V-short, TFPI function, and risk of bleeding.
Sims MC, Gierula M, Stephens JC, Tokolyi A, Stefanucci L, Persyn E, Sun L, Collins JH, Davenport EE, Di Angelantonio E, Downes K, Inouye M, Paul DS, Thomas W, Tolios A, Ouwehand WH, Gleadall NS, Crawley JTB, Butterworth AS, Frontini M, Ahnström J. Sims MC, et al. Among authors: tokolyi a. Blood Adv. 2025 Jan 14;9(1):132-142. doi: 10.1182/bloodadvances.2024014020. Blood Adv. 2025. PMID: 39365993
Mendelian randomisation identifies alternative splicing of the FAS death receptor as a mediator of severe COVID-19.
Klaric L, Gisby JS, Papadaki A, Muckian MD, Macdonald-Dunlop E, Zhao JH, Tokolyi A, Persyn E, Pairo-Castineira E, Morris AP, Kalnapenkis A, Richmond A, Landini A, Hedman ÅK, Prins B, Zanetti D, Wheeler E, Kooperberg C, Yao C, Petrie JR, Fu J, Folkersen L, Walker M, Magnusson M, Eriksson N, Mattsson-Carlgren N, Timmers PRHJ, Hwang SJ, Enroth S, Gustafsson S, Vosa U, Chen Y, Siegbahn A, Reiner A, Johansson Å, Thorand B, Gigante B, Hayward C, Herder C, Gieger C, Langenberg C, Levy D, Zhernakova DV, Smith JG, Campbell H, Sundstrom J, Danesh J, Michaëlsson K, Suhre K, Lind L, Wallentin L, Padyukov L, Landén M, Wareham NJ, Göteson A, Hansson O, Eriksson P, Strawbridge RJ, Assimes TL, Esko T, Gyllensten U, Baillie JK, Paul DS, Joshi PK, Butterworth AS, Mälarstig A, Pirastu N, Wilson JF, Peters JE. Klaric L, et al. Among authors: tokolyi a. medRxiv [Preprint]. 2021 Apr 7:2021.04.01.21254789. doi: 10.1101/2021.04.01.21254789. medRxiv. 2021. PMID: 33851187 Free PMC article. Preprint.
TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets.
Dang LT, Tondl M, Chiu MHH, Revote J, Paten B, Tano V, Tokolyi A, Besse F, Quaife-Ryan G, Cumming H, Drvodelic MJ, Eichenlaub MP, Hallab JC, Stolper JS, Rossello FJ, Bogoyevitch MA, Jans DA, Nim HT, Porrello ER, Hudson JE, Ramialison M. Dang LT, et al. Among authors: tokolyi a. BMC Genomics. 2018 Apr 5;19(1):238. doi: 10.1186/s12864-018-4630-0. BMC Genomics. 2018. PMID: 29621972 Free PMC article.