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2019 1
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2023 5
2024 1

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Page 1
Community-led, integrated, reproducible multi-omics with anvi'o.
Eren AM, Kiefl E, Shaiber A, Veseli I, Miller SE, Schechter MS, Fink I, Pan JN, Yousef M, Fogarty EC, Trigodet F, Watson AR, Esen ÖC, Moore RM, Clayssen Q, Lee MD, Kivenson V, Graham ED, Merrill BD, Karkman A, Blankenberg D, Eppley JM, Sjödin A, Scott JJ, Vázquez-Campos X, McKay LJ, McDaniel EA, Stevens SLR, Anderson RE, Fuessel J, Fernandez-Guerra A, Maignien L, Delmont TO, Willis AD. Eren AM, et al. Among authors: trigodet f. Nat Microbiol. 2021 Jan;6(1):3-6. doi: 10.1038/s41564-020-00834-3. Nat Microbiol. 2021. PMID: 33349678 Free PMC article.
Dynamic genetic adaptation of Bacteroides thetaiotaomicron during murine gut colonization.
Kennedy MS, Zhang M, DeLeon O, Bissell J, Trigodet F, Lolans K, Temelkova S, Carroll KT, Fiebig A, Deutschbauer A, Sidebottom AM, Lake J, Henry C, Rice PA, Bergelson J, Chang EB. Kennedy MS, et al. Among authors: trigodet f. Cell Rep. 2023 Aug 29;42(8):113009. doi: 10.1016/j.celrep.2023.113009. Epub 2023 Aug 21. Cell Rep. 2023. PMID: 37598339 Free PMC article.
Metabolic independence drives gut microbial colonization and resilience in health and disease.
Watson AR, Füssel J, Veseli I, DeLongchamp JZ, Silva M, Trigodet F, Lolans K, Shaiber A, Fogarty E, Runde JM, Quince C, Yu MK, Söylev A, Morrison HG, Lee STM, Kao D, Rubin DT, Jabri B, Louie T, Eren AM. Watson AR, et al. Among authors: trigodet f. Genome Biol. 2023 Apr 17;24(1):78. doi: 10.1186/s13059-023-02924-x. Genome Biol. 2023. PMID: 37069665 Free PMC article.
The mosquito microbiome includes habitat-specific but rare symbionts.
Schrieke H, Maignien L, Constancias F, Trigodet F, Chakloute S, Rakotoarivony I, Marie A, L'Ambert G, Makoundou P, Pages N, Murat Eren A, Weill M, Sicard M, Reveillaud J. Schrieke H, et al. Among authors: trigodet f. Comput Struct Biotechnol J. 2021 Dec 23;20:410-420. doi: 10.1016/j.csbj.2021.12.019. eCollection 2022. Comput Struct Biotechnol J. 2021. PMID: 35140881 Free PMC article.