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Year Number of Results
2009 1
2013 1
2015 7
2016 2
2017 4
2018 3
2021 0
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18 results
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ntHash: recursive nucleotide hashing.
Mohamadi H, Chu J, Vandervalk BP, Birol I. Mohamadi H, et al. Among authors: vandervalk bp. Bioinformatics. 2016 Nov 15;32(22):3492-3494. doi: 10.1093/bioinformatics/btw397. Epub 2016 Jul 16. Bioinformatics. 2016. PMID: 27423894 Free PMC article.
Tigmint: correcting assembly errors using linked reads from large molecules.
Jackman SD, Coombe L, Chu J, Warren RL, Vandervalk BP, Yeo S, Xue Z, Mohamadi H, Bohlmann J, Jones SJM, Birol I. Jackman SD, et al. Among authors: vandervalk bp. BMC Bioinformatics. 2018 Oct 26;19(1):393. doi: 10.1186/s12859-018-2425-6. BMC Bioinformatics. 2018. PMID: 30367597 Free PMC article.
DIDA: Distributed Indexing Dispatched Alignment.
Mohamadi H, Vandervalk BP, Raymond A, Jackman SD, Chu J, Breshears CP, Birol I. Mohamadi H, et al. Among authors: vandervalk bp. PLoS One. 2015 Apr 29;10(4):e0126409. doi: 10.1371/journal.pone.0126409. eCollection 2015. PLoS One. 2015. PMID: 25923767 Free PMC article.
Konnector v2.0: pseudo-long reads from paired-end sequencing data.
Vandervalk BP, Yang C, Xue Z, Raghavan K, Chu J, Mohamadi H, Jackman SD, Chiu R, Warren RL, Birol I. Vandervalk BP, et al. BMC Med Genomics. 2015;8 Suppl 3(Suppl 3):S1. doi: 10.1186/1755-8794-8-S3-S1. Epub 2015 Sep 23. BMC Med Genomics. 2015. PMID: 26399504 Free PMC article.
Sealer: a scalable gap-closing application for finishing draft genomes.
Paulino D, Warren RL, Vandervalk BP, Raymond A, Jackman SD, Birol I. Paulino D, et al. Among authors: vandervalk bp. BMC Bioinformatics. 2015 Jul 25;16(1):230. doi: 10.1186/s12859-015-0663-4. BMC Bioinformatics. 2015. PMID: 26209068 Free PMC article.
The North American bullfrog draft genome provides insight into hormonal regulation of long noncoding RNA.
Hammond SA, Warren RL, Vandervalk BP, Kucuk E, Khan H, Gibb EA, Pandoh P, Kirk H, Zhao Y, Jones M, Mungall AJ, Coope R, Pleasance S, Moore RA, Holt RA, Round JM, Ohora S, Walle BV, Veldhoen N, Helbing CC, Birol I. Hammond SA, et al. Among authors: vandervalk bp. Nat Commun. 2017 Nov 10;8(1):1433. doi: 10.1038/s41467-017-01316-7. Nat Commun. 2017. PMID: 29127278 Free PMC article.
Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation.
Jackman SD, Warren RL, Gibb EA, Vandervalk BP, Mohamadi H, Chu J, Raymond A, Pleasance S, Coope R, Wildung MR, Ritland CE, Bousquet J, Jones SJ, Bohlmann J, Birol I. Jackman SD, et al. Among authors: vandervalk bp. Genome Biol Evol. 2015 Dec 8;8(1):29-41. doi: 10.1093/gbe/evv244. Genome Biol Evol. 2015. PMID: 26645680 Free PMC article.
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