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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1987 1
1989 1
1991 1
1992 2
1994 1
1996 2
1998 2
2006 1
2007 4
2008 2
2010 1
2011 1
2012 1
2013 2
2014 4
2015 3
2016 1
2017 3
2018 1
2019 5
2020 5
2021 10
2022 4
2023 7

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60 results

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Page 1
Geometric deep learning of RNA structure.
Townshend RJL, Eismann S, Watkins AM, Rangan R, Karelina M, Das R, Dror RO. Townshend RJL, et al. Among authors: watkins am. Science. 2021 Aug 27;373(6558):1047-1051. doi: 10.1126/science.abe5650. Science. 2021. PMID: 34446608 Free PMC article.
Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics.
Leppek K, Byeon GW, Kladwang W, Wayment-Steele HK, Kerr CH, Xu AF, Kim DS, Topkar VV, Choe C, Rothschild D, Tiu GC, Wellington-Oguri R, Fujii K, Sharma E, Watkins AM, Nicol JJ, Romano J, Tunguz B, Diaz F, Cai H, Guo P, Wu J, Meng F, Shi S, Participants E, Dormitzer PR, Solórzano A, Barna M, Das R. Leppek K, et al. Among authors: watkins am. Nat Commun. 2022 Mar 22;13(1):1536. doi: 10.1038/s41467-022-28776-w. Nat Commun. 2022. PMID: 35318324 Free PMC article.
RNA 3D Modeling with FARFAR2, Online.
Watkins AM, Das R. Watkins AM, et al. Methods Mol Biol. 2023;2586:233-249. doi: 10.1007/978-1-0716-2768-6_14. Methods Mol Biol. 2023. PMID: 36705908
Using Rosetta for RNA homology modeling.
Watkins AM, Rangan R, Das R. Watkins AM, et al. Methods Enzymol. 2019;623:177-207. doi: 10.1016/bs.mie.2019.05.026. Epub 2019 Jun 11. Methods Enzymol. 2019. PMID: 31239046 Free PMC article.
Community science designed ribosomes with beneficial phenotypes.
Krüger A, Watkins AM, Wellington-Oguri R, Romano J, Kofman C, DeFoe A, Kim Y, Anderson-Lee J, Fisker E, Townley J; Eterna Participants; d'Aquino AE, Das R, Jewett MC. Krüger A, et al. Among authors: watkins am. Nat Commun. 2023 Feb 21;14(1):961. doi: 10.1038/s41467-023-35827-3. Nat Commun. 2023. PMID: 36810740 Free PMC article.
Macrocyclic β-Sheets Stabilized by Hydrogen Bond Surrogates.
Nazzaro A, Lu B, Sawyer N, Watkins AM, Arora PS. Nazzaro A, et al. Among authors: watkins am. Angew Chem Int Ed Engl. 2023 Oct 9;62(41):e202303943. doi: 10.1002/anie.202303943. Epub 2023 Jun 2. Angew Chem Int Ed Engl. 2023. PMID: 37170337
Better together: Elements of successful scientific software development in a distributed collaborative community.
Koehler Leman J, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J; RosettaCommons Consortium; Bystroff C, Schief W, Gront D, Schueler-Furman O, Baker D, Bradley P, Dunbrack R, Kortemme T, Leaver-Fay A, Strauss CEM, Meiler J, Kuhlman B, Gray JJ, Bonneau R. Koehler Leman J, et al. Among authors: watkins am. PLoS Comput Biol. 2020 May 4;16(5):e1007507. doi: 10.1371/journal.pcbi.1007507. eCollection 2020 May. PLoS Comput Biol. 2020. PMID: 32365137 Free PMC article. Review.
Accelerated cryo-EM-guided determination of three-dimensional RNA-only structures.
Kappel K, Zhang K, Su Z, Watkins AM, Kladwang W, Li S, Pintilie G, Topkar VV, Rangan R, Zheludev IN, Yesselman JD, Chiu W, Das R. Kappel K, et al. Among authors: watkins am. Nat Methods. 2020 Jul;17(7):699-707. doi: 10.1038/s41592-020-0878-9. Epub 2020 Jul 2. Nat Methods. 2020. PMID: 32616928 Free PMC article.
60 results