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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2019 4
2020 3
2021 4
2022 3
2023 1
2024 0

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14 results

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Page 1
Gene Set Knowledge Discovery with Enrichr.
Xie Z, Bailey A, Kuleshov MV, Clarke DJB, Evangelista JE, Jenkins SL, Lachmann A, Wojciechowicz ML, Kropiwnicki E, Jagodnik KM, Jeon M, Ma'ayan A. Xie Z, et al. Among authors: wojciechowicz ml. Curr Protoc. 2021 Mar;1(3):e90. doi: 10.1002/cpz1.90. Curr Protoc. 2021. PMID: 33780170 Free PMC article.
GPR84: an immune response dial?
Wojciechowicz ML, Ma'ayan A. Wojciechowicz ML, et al. Nat Rev Drug Discov. 2020 Jun;19(6):374. doi: 10.1038/d41573-020-00029-9. Nat Rev Drug Discov. 2020. PMID: 32494048 Free PMC article. No abstract available.
Getting Started with LINCS Datasets and Tools.
Xie Z, Kropiwnicki E, Wojciechowicz ML, Jagodnik KM, Shu I, Bailey A, Clarke DJB, Jeon M, Evangelista JE, V Kuleshov M, Lachmann A, Parigi AA, Sanchez JM, Jenkins SL, Ma'ayan A. Xie Z, et al. Among authors: wojciechowicz ml. Curr Protoc. 2022 Jul;2(7):e487. doi: 10.1002/cpz1.487. Curr Protoc. 2022. PMID: 35876555 Free PMC article.
Appyters: Turning Jupyter Notebooks into data-driven web apps.
Clarke DJB, Jeon M, Stein DJ, Moiseyev N, Kropiwnicki E, Dai C, Xie Z, Wojciechowicz ML, Litz S, Hom J, Evangelista JE, Goldman L, Zhang S, Yoon C, Ahamed T, Bhuiyan S, Cheng M, Karam J, Jagodnik KM, Shu I, Lachmann A, Ayling S, Jenkins SL, Ma'ayan A. Clarke DJB, et al. Among authors: wojciechowicz ml. Patterns (N Y). 2021 Mar 4;2(3):100213. doi: 10.1016/j.patter.2021.100213. eCollection 2021 Mar 12. Patterns (N Y). 2021. PMID: 33748796 Free PMC article.
lncHUB2: aggregated and inferred knowledge about human and mouse lncRNAs.
Marino GB, Wojciechowicz ML, Clarke DJB, Kuleshov MV, Xie Z, Jeon M, Lachmann A, Ma'ayan A. Marino GB, et al. Among authors: wojciechowicz ml. Database (Oxford). 2023 Mar 4;2023:baad009. doi: 10.1093/database/baad009. Database (Oxford). 2023. PMID: 36869839 Free PMC article.
Transforming L1000 profiles to RNA-seq-like profiles with deep learning.
Jeon M, Xie Z, Evangelista JE, Wojciechowicz ML, Clarke DJB, Ma'ayan A. Jeon M, et al. Among authors: wojciechowicz ml. BMC Bioinformatics. 2022 Sep 13;23(1):374. doi: 10.1186/s12859-022-04895-5. BMC Bioinformatics. 2022. PMID: 36100892 Free PMC article.
SigCom LINCS: data and metadata search engine for a million gene expression signatures.
Evangelista JE, Clarke DJB, Xie Z, Lachmann A, Jeon M, Chen K, Jagodnik KM, Jenkins SL, Kuleshov MV, Wojciechowicz ML, Schürer SC, Medvedovic M, Ma'ayan A. Evangelista JE, et al. Among authors: wojciechowicz ml. Nucleic Acids Res. 2022 Jul 5;50(W1):W697-W709. doi: 10.1093/nar/gkac328. Nucleic Acids Res. 2022. PMID: 35524556 Free PMC article.
ChEA3: transcription factor enrichment analysis by orthogonal omics integration.
Keenan AB, Torre D, Lachmann A, Leong AK, Wojciechowicz ML, Utti V, Jagodnik KM, Kropiwnicki E, Wang Z, Ma'ayan A. Keenan AB, et al. Among authors: wojciechowicz ml. Nucleic Acids Res. 2019 Jul 2;47(W1):W212-W224. doi: 10.1093/nar/gkz446. Nucleic Acids Res. 2019. PMID: 31114921 Free PMC article.
FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources.
Clarke DJB, Wang L, Jones A, Wojciechowicz ML, Torre D, Jagodnik KM, Jenkins SL, McQuilton P, Flamholz Z, Silverstein MC, Schilder BM, Robasky K, Castillo C, Idaszak R, Ahalt SC, Williams J, Schurer S, Cooper DJ, de Miranda Azevedo R, Klenk JA, Haendel MA, Nedzel J, Avillach P, Shimoyama ME, Harris RM, Gamble M, Poten R, Charbonneau AL, Larkin J, Brown CT, Bonazzi VR, Dumontier MJ, Sansone SA, Ma'ayan A. Clarke DJB, et al. Among authors: wojciechowicz ml. Cell Syst. 2019 Nov 27;9(5):417-421. doi: 10.1016/j.cels.2019.09.011. Epub 2019 Oct 30. Cell Syst. 2019. PMID: 31677972 Free PMC article.
Predicting Lyme Disease From Patients' Peripheral Blood Mononuclear Cells Profiled With RNA-Sequencing.
Clarke DJB, Rebman AW, Bailey A, Wojciechowicz ML, Jenkins SL, Evangelista JE, Danieletto M, Fan J, Eshoo MW, Mosel MR, Robinson W, Ramadoss N, Bobe J, Soloski MJ, Aucott JN, Ma'ayan A. Clarke DJB, et al. Among authors: wojciechowicz ml. Front Immunol. 2021 Mar 8;12:636289. doi: 10.3389/fimmu.2021.636289. eCollection 2021. Front Immunol. 2021. PMID: 33763080 Free PMC article.
14 results