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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2012 2
2013 1
2014 1
2015 2
2017 3
2018 4
2019 3
2020 1
2021 1
2022 1
2023 1
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19 results
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Page 1
High-content single-cell combinatorial indexing.
Mulqueen RM, Pokholok D, O'Connell BL, Thornton CA, Zhang F, O'Roak BJ, Link J, Yardımcı GG, Sears RC, Steemers FJ, Adey AC. Mulqueen RM, et al. Among authors: yardimci gg. Nat Biotechnol. 2021 Dec;39(12):1574-1580. doi: 10.1038/s41587-021-00962-z. Epub 2021 Jul 5. Nat Biotechnol. 2021. PMID: 34226710 Free PMC article.
Software tools for visualizing Hi-C data.
Yardımcı GG, Noble WS. Yardımcı GG, et al. Genome Biol. 2017 Feb 3;18(1):26. doi: 10.1186/s13059-017-1161-y. Genome Biol. 2017. PMID: 28159004 Free PMC article. Review.
GoPeaks: histone modification peak calling for CUT&Tag.
Yashar WM, Kong G, VanCampen J, Curtiss BM, Coleman DJ, Carbone L, Yardimci GG, Maxson JE, Braun TP. Yashar WM, et al. Among authors: yardimci gg. Genome Biol. 2022 Jul 4;23(1):144. doi: 10.1186/s13059-022-02707-w. Genome Biol. 2022. PMID: 35788238 Free PMC article.
Unsupervised embedding of single-cell Hi-C data.
Liu J, Lin D, Yardimci GG, Noble WS. Liu J, et al. Among authors: yardimci gg. Bioinformatics. 2018 Jul 1;34(13):i96-i104. doi: 10.1093/bioinformatics/bty285. Bioinformatics. 2018. PMID: 29950005 Free PMC article.
Measuring the reproducibility and quality of Hi-C data.
Yardımcı GG, Ozadam H, Sauria MEG, Ursu O, Yan KK, Yang T, Chakraborty A, Kaul A, Lajoie BR, Song F, Zhan Y, Ay F, Gerstein M, Kundaje A, Li Q, Taylor J, Yue F, Dekker J, Noble WS. Yardımcı GG, et al. Genome Biol. 2019 Mar 19;20(1):57. doi: 10.1186/s13059-019-1658-7. Genome Biol. 2019. PMID: 30890172 Free PMC article.
Integrative detection and analysis of structural variation in cancer genomes.
Dixon JR, Xu J, Dileep V, Zhan Y, Song F, Le VT, Yardımcı GG, Chakraborty A, Bann DV, Wang Y, Clark R, Zhang L, Yang H, Liu T, Iyyanki S, An L, Pool C, Sasaki T, Rivera-Mulia JC, Ozadam H, Lajoie BR, Kaul R, Buckley M, Lee K, Diegel M, Pezic D, Ernst C, Hadjur S, Odom DT, Stamatoyannopoulos JA, Broach JR, Hardison RC, Ay F, Noble WS, Dekker J, Gilbert DM, Yue F. Dixon JR, et al. Among authors: yardimci gg. Nat Genet. 2018 Oct;50(10):1388-1398. doi: 10.1038/s41588-018-0195-8. Epub 2018 Sep 10. Nat Genet. 2018. PMID: 30202056 Free PMC article.
Transcriptional control of tissue formation throughout root development.
Moreno-Risueno MA, Sozzani R, Yardımcı GG, Petricka JJ, Vernoux T, Blilou I, Alonso J, Winter CM, Ohler U, Scheres B, Benfey PN. Moreno-Risueno MA, et al. Among authors: yardimci gg. Science. 2015 Oct 23;350(6259):426-30. doi: 10.1126/science.aad1171. Science. 2015. PMID: 26494755 Free PMC article.
Predictive model of 3D domain formation via CTCF-mediated extrusion.
Yardımcı GG, Noble WS. Yardımcı GG, et al. Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):14404-5. doi: 10.1073/pnas.1519849112. Epub 2015 Nov 13. Proc Natl Acad Sci U S A. 2015. PMID: 26567152 Free PMC article. No abstract available.
19 results