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Year Number of Results
2012 2
2013 1
2014 1
2015 2
2017 3
2018 4
2019 3
2020 1
2021 0
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16 results
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Page 1
Integrative detection and analysis of structural variation in cancer genomes.
Dixon JR, Xu J, Dileep V, Zhan Y, Song F, Le VT, Yardımcı GG, Chakraborty A, Bann DV, Wang Y, Clark R, Zhang L, Yang H, Liu T, Iyyanki S, An L, Pool C, Sasaki T, Rivera-Mulia JC, Ozadam H, Lajoie BR, Kaul R, Buckley M, Lee K, Diegel M, Pezic D, Ernst C, Hadjur S, Odom DT, Stamatoyannopoulos JA, Broach JR, Hardison RC, Ay F, Noble WS, Dekker J, Gilbert DM, Yue F. Dixon JR, et al. Among authors: yardimci gg. Nat Genet. 2018 Oct;50(10):1388-1398. doi: 10.1038/s41588-018-0195-8. Epub 2018 Sep 10. Nat Genet. 2018. PMID: 30202056 Free PMC article.
Software tools for visualizing Hi-C data.
Yardımcı GG, Noble WS. Yardımcı GG, et al. Genome Biol. 2017 Feb 3;18(1):26. doi: 10.1186/s13059-017-1161-y. Genome Biol. 2017. PMID: 28159004 Free PMC article. Review.
Measuring the reproducibility and quality of Hi-C data.
Yardımcı GG, Ozadam H, Sauria MEG, Ursu O, Yan KK, Yang T, Chakraborty A, Kaul A, Lajoie BR, Song F, Zhan Y, Ay F, Gerstein M, Kundaje A, Li Q, Taylor J, Yue F, Dekker J, Noble WS. Yardımcı GG, et al. Genome Biol. 2019 Mar 19;20(1):57. doi: 10.1186/s13059-019-1658-7. Genome Biol. 2019. PMID: 30890172 Free PMC article.
Unsupervised embedding of single-cell Hi-C data.
Liu J, Lin D, Yardimci GG, Noble WS. Liu J, et al. Among authors: yardimci gg. Bioinformatics. 2018 Jul 1;34(13):i96-i104. doi: 10.1093/bioinformatics/bty285. Bioinformatics. 2018. PMID: 29950005 Free PMC article.
Transcriptional control of tissue formation throughout root development.
Moreno-Risueno MA, Sozzani R, Yardımcı GG, Petricka JJ, Vernoux T, Blilou I, Alonso J, Winter CM, Ohler U, Scheres B, Benfey PN. Moreno-Risueno MA, et al. Among authors: yardimci gg. Science. 2015 Oct 23;350(6259):426-30. doi: 10.1126/science.aad1171. Science. 2015. PMID: 26494755 Free PMC article.
Predictive model of 3D domain formation via CTCF-mediated extrusion.
Yardımcı GG, Noble WS. Yardımcı GG, et al. Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):14404-5. doi: 10.1073/pnas.1519849112. Epub 2015 Nov 13. Proc Natl Acad Sci U S A. 2015. PMID: 26567152 Free PMC article. No abstract available.
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