Youngblut ND[au] - Search Results

Year	Number of Results
2010	1
2012	3
2013	2
2014	3
2015	3
2017	2
2018	2
2019	4
2020	6
2021	6
2022	5
2023	1

1

Codiversification of gut microbiota with humans.

Suzuki TA, Fitzstevens JL, Schmidt VT, Enav H, Huus KE, Mbong Ngwese M, Grießhammer A, Pfleiderer A, Adegbite BR, Zinsou JF, Esen M, Velavan TP, Adegnika AA, Song LH, Spector TD, Muehlbauer AL, Marchi N, Kang H, Maier L, Blekhman R, Ségurel L, Ko G, Youngblut ND, Kremsner P, Ley RE. Suzuki TA, et al. Among authors: youngblut nd. Science. 2022 Sep 16;377(6612):1328-1332. doi: 10.1126/science.abm7759. Epub 2022 Sep 15. Science. 2022. PMID: 36108023

2

Interpreting tree ensemble machine learning models with endoR.

Ruaud A, Pfister N, Ley RE, Youngblut ND. Ruaud A, et al. Among authors: youngblut nd. PLoS Comput Biol. 2022 Dec 14;18(12):e1010714. doi: 10.1371/journal.pcbi.1010714. eCollection 2022 Dec. PLoS Comput Biol. 2022. PMID: 36516158 Free PMC article.

3

Vertebrate host phylogeny influences gut archaeal diversity.

Youngblut ND, Reischer GH, Dauser S, Maisch S, Walzer C, Stalder G, Farnleitner AH, Ley RE. Youngblut ND, et al. Nat Microbiol. 2021 Nov;6(11):1443-1454. doi: 10.1038/s41564-021-00980-2. Epub 2021 Oct 26. Nat Microbiol. 2021. PMID: 34702978 Free PMC article.

4

DeepMAsED: evaluating the quality of metagenomic assemblies.

Mineeva O, Rojas-Carulla M, Ley RE, Schölkopf B, Youngblut ND. Mineeva O, et al. Among authors: youngblut nd. Bioinformatics. 2020 May 1;36(10):3011-3017. doi: 10.1093/bioinformatics/btaa124. Bioinformatics. 2020. PMID: 32096824

5

Bacterial community dynamics explain carbon mineralization and assimilation in soils of different land-use history.

Barnett SE, Youngblut ND, Buckley DH. Barnett SE, et al. Among authors: youngblut nd. Environ Microbiol. 2022 Nov;24(11):5230-5247. doi: 10.1111/1462-2920.16146. Epub 2022 Aug 5. Environ Microbiol. 2022. PMID: 35920035

6

Struo2: efficient metagenome profiling database construction for ever-expanding microbial genome datasets.

Youngblut ND, Ley RE. Youngblut ND, et al. PeerJ. 2021 Sep 16;9:e12198. doi: 10.7717/peerj.12198. eCollection 2021. PeerJ. 2021. PMID: 34616633 Free PMC article.

7

Soil characteristics and land-use drive bacterial community assembly patterns.

Barnett SE, Youngblut ND, Buckley DH. Barnett SE, et al. Among authors: youngblut nd. FEMS Microbiol Ecol. 2020 Jan 1;96(1):fiz194. doi: 10.1093/femsec/fiz194. FEMS Microbiol Ecol. 2020. PMID: 31834372

8

Tracing Carbon Metabolism with Stable Isotope Metabolomics Reveals the Legacy of Diverse Carbon Sources in Soil.

Wilhelm RC, Barnett SE, Swenson TL, Youngblut ND, Koechli CN, Bowen BP, Northen TR, Buckley DH. Wilhelm RC, et al. Among authors: youngblut nd. Appl Environ Microbiol. 2022 Nov 22;88(22):e0083922. doi: 10.1128/aem.00839-22. Epub 2022 Oct 27. Appl Environ Microbiol. 2022. PMID: 36300927

9

Incorporating genome-based phylogeny and functional similarity into diversity assessments helps to resolve a global collection of human gut metagenomes.

Youngblut ND, de la Cuesta-Zuluaga J, Ley RE. Youngblut ND, et al. Environ Microbiol. 2022 Sep;24(9):3966-3984. doi: 10.1111/1462-2920.15910. Epub 2022 Jan 31. Environ Microbiol. 2022. PMID: 35049120

10

Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis.

Liu X, Sutter JL, de la Cuesta-Zuluaga J, Waters JL, Youngblut ND, Ley RE. Liu X, et al. Among authors: youngblut nd. Int J Syst Evol Microbiol. 2021 Apr;71(4):004774. doi: 10.1099/ijsem.0.004774. Int J Syst Evol Microbiol. 2021. PMID: 33881979 Free PMC article.

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