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Year Number of Results
1994 1
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1996 1
1998 1
2001 1
2003 1
2006 1
2007 1
2009 2
2010 2
2011 3
2012 2
2013 4
2014 5
2015 11
2016 8
2017 5
2018 6
2019 8
2020 6
2021 9
2022 11
2023 12
2024 19
2025 10

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128 results

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Page 1
Scientific discovery in the age of artificial intelligence.
Wang H, Fu T, Du Y, Gao W, Huang K, Liu Z, Chandak P, Liu S, Van Katwyk P, Deac A, Anandkumar A, Bergen K, Gomes CP, Ho S, Kohli P, Lasenby J, Leskovec J, Liu TY, Manrai A, Marks D, Ramsundar B, Song L, Sun J, Tang J, Veličković P, Welling M, Zhang L, Coley CW, Bengio Y, Zitnik M. Wang H, et al. Among authors: zitnik m. Nature. 2023 Aug;620(7972):47-60. doi: 10.1038/s41586-023-06221-2. Epub 2023 Aug 2. Nature. 2023. PMID: 37532811 Review.
Empowering biomedical discovery with AI agents.
Gao S, Fang A, Huang Y, Giunchiglia V, Noori A, Schwarz JR, Ektefaie Y, Kondic J, Zitnik M. Gao S, et al. Among authors: zitnik m. Cell. 2024 Oct 31;187(22):6125-6151. doi: 10.1016/j.cell.2024.09.022. Cell. 2024. PMID: 39486399 Free article. Review.
How to build the virtual cell with artificial intelligence: Priorities and opportunities.
Bunne C, Roohani Y, Rosen Y, Gupta A, Zhang X, Roed M, Alexandrov T, AlQuraishi M, Brennan P, Burkhardt DB, Califano A, Cool J, Dernburg AF, Ewing K, Fox EB, Haury M, Herr AE, Horvitz E, Hsu PD, Jain V, Johnson GR, Kalil T, Kelley DR, Kelley SO, Kreshuk A, Mitchison T, Otte S, Shendure J, Sofroniew NJ, Theis F, Theodoris CV, Upadhyayula S, Valer M, Wang B, Xing E, Yeung-Levy S, Zitnik M, Karaletsos T, Regev A, Lundberg E, Leskovec J, Quake SR. Bunne C, et al. Among authors: zitnik m. Cell. 2024 Dec 12;187(25):7045-7063. doi: 10.1016/j.cell.2024.11.015. Cell. 2024. PMID: 39672099 Free article.
A foundation model for clinician-centered drug repurposing.
Huang K, Chandak P, Wang Q, Havaldar S, Vaid A, Leskovec J, Nadkarni GN, Glicksberg BS, Gehlenborg N, Zitnik M. Huang K, et al. Among authors: zitnik m. Nat Med. 2024 Dec;30(12):3601-3613. doi: 10.1038/s41591-024-03233-x. Epub 2024 Sep 25. Nat Med. 2024. PMID: 39322717 Free PMC article.
Prioritizing network communities.
Zitnik M, Sosič R, Leskovec J. Zitnik M, et al. Nat Commun. 2018 Jun 29;9(1):2544. doi: 10.1038/s41467-018-04948-5. Nat Commun. 2018. PMID: 29959323 Free PMC article.
Current and future directions in network biology.
Zitnik M, Li MM, Wells A, Glass K, Morselli Gysi D, Krishnan A, Murali TM, Radivojac P, Roy S, Baudot A, Bozdag S, Chen DZ, Cowen L, Devkota K, Gitter A, Gosline SJC, Gu P, Guzzi PH, Huang H, Jiang M, Kesimoglu ZN, Koyuturk M, Ma J, Pico AR, Pržulj N, Przytycka TM, Raphael BJ, Ritz A, Sharan R, Shen Y, Singh M, Slonim DK, Tong H, Yang XH, Yoon BJ, Yu H, Milenković T. Zitnik M, et al. Bioinform Adv. 2024 Aug 14;4(1):vbae099. doi: 10.1093/bioadv/vbae099. eCollection 2024. Bioinform Adv. 2024. PMID: 39143982 Free PMC article.
Graph Artificial Intelligence in Medicine.
Johnson R, Li MM, Noori A, Queen O, Zitnik M. Johnson R, et al. Among authors: zitnik m. Annu Rev Biomed Data Sci. 2024 Aug;7(1):345-368. doi: 10.1146/annurev-biodatasci-110723-024625. Epub 2024 Jul 24. Annu Rev Biomed Data Sci. 2024. PMID: 38749465 Free PMC article. Review.
Multimodal learning with graphs.
Ektefaie Y, Dasoulas G, Noori A, Farhat M, Zitnik M. Ektefaie Y, et al. Among authors: zitnik m. Nat Mach Intell. 2023 Apr;5(4):340-350. doi: 10.1038/s42256-023-00624-6. Epub 2023 Apr 3. Nat Mach Intell. 2023. PMID: 38076673 Free PMC article.
Graph representation learning in biomedicine and healthcare.
Li MM, Huang K, Zitnik M. Li MM, et al. Among authors: zitnik m. Nat Biomed Eng. 2022 Dec;6(12):1353-1369. doi: 10.1038/s41551-022-00942-x. Epub 2022 Oct 31. Nat Biomed Eng. 2022. PMID: 36316368 Free PMC article. Review.
Contextual AI models for single-cell protein biology.
Li MM, Huang Y, Sumathipala M, Liang MQ, Valdeolivas A, Ananthakrishnan AN, Liao K, Marbach D, Zitnik M. Li MM, et al. Among authors: zitnik m. Nat Methods. 2024 Aug;21(8):1546-1557. doi: 10.1038/s41592-024-02341-3. Epub 2024 Jul 22. Nat Methods. 2024. PMID: 39039335 Free PMC article.
128 results