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2017 1
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2022 3
2023 1
2024 0

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WormBase single-cell tools.
da Veiga Beltrame E, Arnaboldi V, Sternberg PW. da Veiga Beltrame E, et al. Bioinform Adv. 2022 Mar 28;2(1):vbac018. doi: 10.1093/bioadv/vbac018. eCollection 2022. Bioinform Adv. 2022. PMID: 35814290 Free PMC article.
Single-nucleus resolution mapping of the adult C. elegans and its application to elucidate inter- and trans-generational response to alcohol.
Truong L, Chen YW, Barrere-Cain R, Levenson MT, Shuck K, Xiao W, da Veiga Beltrame E, Panter B, Reich E, Sternberg PW, Yang X, Allard P. Truong L, et al. Among authors: da veiga beltrame e. Cell Rep. 2023 Jun 27;42(6):112535. doi: 10.1016/j.celrep.2023.112535. Epub 2023 May 23. Cell Rep. 2023. PMID: 37227821 Free PMC article.
Modular, efficient and constant-memory single-cell RNA-seq preprocessing.
Melsted P, Booeshaghi AS, Liu L, Gao F, Lu L, Min KHJ, da Veiga Beltrame E, Hjörleifsson KE, Gehring J, Pachter L. Melsted P, et al. Among authors: da veiga beltrame e. Nat Biotechnol. 2021 Jul;39(7):813-818. doi: 10.1038/s41587-021-00870-2. Epub 2021 Apr 1. Nat Biotechnol. 2021. PMID: 33795888
A curated database reveals trends in single-cell transcriptomics.
Svensson V, da Veiga Beltrame E, Pachter L. Svensson V, et al. Among authors: da veiga beltrame e. Database (Oxford). 2020 Nov 28;2020:baaa073. doi: 10.1093/database/baaa073. Database (Oxford). 2020. PMID: 33247933 Free PMC article.
A Python library for probabilistic analysis of single-cell omics data.
Gayoso A, Lopez R, Xing G, Boyeau P, Valiollah Pour Amiri V, Hong J, Wu K, Jayasuriya M, Mehlman E, Langevin M, Liu Y, Samaran J, Misrachi G, Nazaret A, Clivio O, Xu C, Ashuach T, Gabitto M, Lotfollahi M, Svensson V, da Veiga Beltrame E, Kleshchevnikov V, Talavera-López C, Pachter L, Theis FJ, Streets A, Jordan MI, Regier J, Yosef N. Gayoso A, et al. Among authors: da veiga beltrame e. Nat Biotechnol. 2022 Feb;40(2):163-166. doi: 10.1038/s41587-021-01206-w. Nat Biotechnol. 2022. PMID: 35132262 No abstract available.
WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans.
Davis P, Zarowiecki M, Arnaboldi V, Becerra A, Cain S, Chan J, Chen WJ, Cho J, da Veiga Beltrame E, Diamantakis S, Gao S, Grigoriadis D, Grove CA, Harris TW, Kishore R, Le T, Lee RYN, Luypaert M, Müller HM, Nakamura C, Nuin P, Paulini M, Quinton-Tulloch M, Raciti D, Rodgers FH, Russell M, Schindelman G, Singh A, Stickland T, Van Auken K, Wang Q, Williams G, Wright AJ, Yook K, Berriman M, Howe KL, Schedl T, Stein L, Sternberg PW. Davis P, et al. Among authors: da veiga beltrame e. Genetics. 2022 Apr 4;220(4):iyac003. doi: 10.1093/genetics/iyac003. Genetics. 2022. PMID: 35134929 Free PMC article.
3D Printing of Biomolecular Models for Research and Pedagogy.
Da Veiga Beltrame E, Tyrwhitt-Drake J, Roy I, Shalaby R, Suckale J, Pomeranz Krummel D. Da Veiga Beltrame E, et al. J Vis Exp. 2017 Mar 13;(121):55427. doi: 10.3791/55427. J Vis Exp. 2017. PMID: 28362403 Free PMC article.