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Reconstitution of the augmin complex provides insights into its architecture and function.
Hsia KC, Wilson-Kubalek EM, Dottore A, Hao Q, Tsai KL, Forth S, Shimamoto Y, Milligan RA, Kapoor TM. Hsia KC, et al. Nat Cell Biol. 2014 Sep;16(9):852-63. doi: 10.1038/ncb3030. Epub 2014 Aug 31. Nat Cell Biol. 2014. PMID: 25173975 Free PMC article.
However, augmin's biochemical complexity has restricted analysis of its structural organization and function. Here, we reconstitute human augmin and show that it is a Y-shaped complex that can adopt multiple conformations. ...
However, augmin's biochemical complexity has restricted analysis of its structural organization and function. Here, we …
Identification of 64 Novel Genetic Loci Provides an Expanded View on the Genetic Architecture of Coronary Artery Disease.
van der Harst P, Verweij N. van der Harst P, et al. Circ Res. 2018 Feb 2;122(3):433-443. doi: 10.1161/CIRCRESAHA.117.312086. Epub 2017 Dec 6. Circ Res. 2018. PMID: 29212778 Free PMC article.
RATIONALE: Coronary artery disease (CAD) is a complex phenotype driven by genetic and environmental factors. Ninety-seven genetic risk loci have been identified to date, but the identification of additional susceptibility loci might be important to enhance our understandin …
RATIONALE: Coronary artery disease (CAD) is a complex phenotype driven by genetic and environmental factors. Ninety-seven genetic ris …
The Structure of the Nuclear Pore Complex (An Update).
Lin DH, Hoelz A. Lin DH, et al. Annu Rev Biochem. 2019 Jun 20;88:725-783. doi: 10.1146/annurev-biochem-062917-011901. Epub 2019 Mar 18. Annu Rev Biochem. 2019. PMID: 30883195 Free PMC article. Review.
Here, we discuss the insights gained from these new advances and outstanding issues regarding NPC structure and function. The powerful combination of bottom-up and top-down approaches toward determining the structure of the NPC offers a paradigm for uncovering the …
Here, we discuss the insights gained from these new advances and outstanding issues regarding NPC structure and function. The …
Reconstitution of CRISPR adaptation in vitro and its detection by PCR.
Fagerlund RD, Ferguson TJ, Maxwell HWR, Opel-Reading HK, Krause KL, Fineran PC. Fagerlund RD, et al. Methods Enzymol. 2019;616:411-433. doi: 10.1016/bs.mie.2018.10.024. Epub 2019 Jan 12. Methods Enzymol. 2019. PMID: 30691653
Structural and biochemical studies from reconstituted complexes have provided mechanistic insight into how CRISPR adaptation occurs; however, these studies have been limited to a narrow subset of CRISPR-Cas types and may not be representative of the ot …
Structural and biochemical studies from reconstituted complexes have provided mechanistic insight into how CRISP …
Molecular interactions of the Saccharomyces cerevisiae Atg1 complex provide insights into assembly and regulatory mechanisms.
Chew LH, Lu S, Liu X, Li FK, Yu AY, Klionsky DJ, Dong MQ, Yip CK. Chew LH, et al. Autophagy. 2015;11(6):891-905. doi: 10.1080/15548627.2015.1040972. Autophagy. 2015. PMID: 25998554 Free PMC article.
To gain a better understanding of the overall architecture and assembly mechanism of this essential autophagy regulatory complex, we have reconstituted a core assembly of the Saccharomyces cerevisiae Atg1 complex composed of full-length Atg17, Atg29, a …
To gain a better understanding of the overall architecture and assembly mechanism of this essential autophagy regulatory complex
Novel insights into the architecture and protein interaction network of yeast eIF3.
Khoshnevis S, Hauer F, Milón P, Stark H, Ficner R. Khoshnevis S, et al. RNA. 2012 Dec;18(12):2306-19. doi: 10.1261/rna.032532.112. Epub 2012 Oct 26. RNA. 2012. PMID: 23105002 Free PMC article.
This reconstituted eIF3 complex (eIF3(rec)) exhibits the same size and activity as the natively purified eIF3 (eIF3(nat)). The homogeneity and stoichiometry of eIF3(rec) and eIF3(nat) were confirmed by analytical size exclusion chromatography, mass spectrometry, and …
This reconstituted eIF3 complex (eIF3(rec)) exhibits the same size and activity as the natively purified eIF3 (eIF3(nat)). The …
In vitro reconstitution of yeast tUTP/UTP A and UTP B subcomplexes provides new insights into their modular architecture.
Pöll G, Li S, Ohmayer U, Hierlmeier T, Milkereit P, Perez-Fernandez J. Pöll G, et al. PLoS One. 2014 Dec 12;9(12):e114898. doi: 10.1371/journal.pone.0114898. eCollection 2014. PLoS One. 2014. PMID: 25501974 Free PMC article.
The composition of the UTP subcomplexes and the network of binary interactions between protein subunits have been analyzed previously. To obtain further insights into the structural and biochemical properties of UTP subcomplexes, we established a heterologous expression sy …
The composition of the UTP subcomplexes and the network of binary interactions between protein subunits have been analyzed previously. To ob …
Molecular Organization of Soluble Type III Secretion System Sorting Platform Complexes.
Bernal I, Börnicke J, Heidemann J, Svergun D, Horstmann JA, Erhardt M, Tuukkanen A, Uetrecht C, Kolbe M. Bernal I, et al. J Mol Biol. 2019 Sep 6;431(19):3787-3803. doi: 10.1016/j.jmb.2019.07.004. Epub 2019 Jul 6. J Mol Biol. 2019. PMID: 31288030
We establish domain-domain interactions, determine for the first time the stoichiometry of each subunit within the complexes by native mass spectrometry and gain insight into their organization using small-angle X-ray scattering. ...The determined molecular arrangem …
We establish domain-domain interactions, determine for the first time the stoichiometry of each subunit within the complexes by nativ …
Structures and interactions of proteins involved in the coupling function of the protonmotive F(o)F(1)-ATP synthase.
Gaballo A, Zanotti F, Papa S. Gaballo A, et al. Curr Protein Pept Sci. 2002 Aug;3(4):451-60. doi: 10.2174/1389203023380558. Curr Protein Pept Sci. 2002. PMID: 12370007 Review.
The mitochondrial F(1)F(o) ATP synthase complex has a key role in cellular energy metabolism. The general architecture of the enzyme is conserved among species and consists of a globular catalytic moiety F(1), protruding out of the inner side of the membrane, a memb …
The mitochondrial F(1)F(o) ATP synthase complex has a key role in cellular energy metabolism. The general architecture of the …
Mapping Lysine Acetyltransferase-Ligand Interactions by Activity-Based Capture.
Montgomery DC, Meier JL. Montgomery DC, et al. Methods Enzymol. 2016;574:105-123. doi: 10.1016/bs.mie.2016.01.006. Epub 2016 Feb 16. Methods Enzymol. 2016. PMID: 27423859
Changes in reversible protein acetylation mediate many key aspects of genomic regulation and enzyme function. The catalysts for this posttranslational modification, lysine acetyltransferases (KATs), have been difficult targets for characterization due to their complex
Changes in reversible protein acetylation mediate many key aspects of genomic regulation and enzyme function. The catalysts for this …
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