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What is the current bottleneck in mapping molecular interaction networks?
Skinnider MA, Luck K, Mukhtar MS, Garrido-Rodriguez M, Saez-Rodriguez J, van Leeuwen J, Beltrao P, Carvunis AR, Taipale M, Emili A, Bulyk ML, Krogan NJ. Skinnider MA, et al. Among authors: bulyk ml. Cell Syst. 2025 May 21;16(5):101295. doi: 10.1016/j.cels.2025.101295. Cell Syst. 2025. PMID: 40403700 No abstract available.
Emerging questions in transcriptional regulation.
Nora EP, Aerts S, Wittkopp PJ, Bussemaker HJ, Bulyk M, Sinha S, Zeitlinger J, Crocker J, Fuxman Bass JI. Nora EP, et al. Cell Syst. 2023 Apr 19;14(4):247-251. doi: 10.1016/j.cels.2023.03.005. Cell Syst. 2023. PMID: 37080160 Free article.
Structural Basis of a Novel Heme Binding Bacterial One-Component Switch.
Siclari JJ, Forson M, Roeder C, Isiorho EA, Favaro DC, Abzalimov RR, Gisselbrecht SS, Follmer AH, Bulyk ML, Gardner KH. Siclari JJ, et al. Among authors: bulyk ml. bioRxiv [Preprint]. 2026 Mar 15:2026.03.15.711900. doi: 10.64898/2026.03.15.711900. bioRxiv. 2026. PMID: 41959290 Free PMC article. Preprint.
Viral transcriptional regulators extensively rewire host pathways through diverse mechanisms.
Rottenberg JT, Liu X, Berenson A, Soto-Ugaldi LF, ElSadec MY, Santoso C, Corban JE, Dexheimer PJ, Engin B, Lane R, Shah S, Spirohn-Fitzgerald K, Khetan S, Lee CC, Munoz-Esquivel G, Li Z, Martinez-Cuesta L, Lu Y, Trollmann P, Hao T, Yi SS, Sahni N, Bulyk ML, Calderwood M, Weirauch MT, Vidal M, Raman S, Fuxman Bass JI. Rottenberg JT, et al. Among authors: bulyk ml. bioRxiv [Preprint]. 2025 Dec 2:2025.12.01.691387. doi: 10.64898/2025.12.01.691387. bioRxiv. 2025. PMID: 41573883 Free PMC article. Preprint.
Beyond the gene: decoding alternative isoforms.
Mattioli K, Bulyk ML. Mattioli K, et al. Among authors: bulyk ml. Trends Genet. 2025 Dec 11:S0168-9525(25)00285-9. doi: 10.1016/j.tig.2025.11.003. Online ahead of print. Trends Genet. 2025. PMID: 41381320 Review.
TF paralogs-Natural experiments in DNA binding.
Khetan S, Bulyk ML. Khetan S, et al. Among authors: bulyk ml. Curr Opin Struct Biol. 2025 Dec;95:103171. doi: 10.1016/j.sbi.2025.103171. Epub 2025 Oct 22. Curr Opin Struct Biol. 2025. PMID: 41130140 Review.
158 results