Kondo J - Search Results

1

Gold-Mediated Base Pairs in Nucleic Acids: Selective Coordination to Natural and Thiocarbonyl-Modified Cytosines Dependent upon the Oxidation State of Gold.

Kosugi K, Sugawara A, Iwase E, Park H, Fujiwara S, Kanazawa H, Ono A, Kondo J. Kosugi K, et al. Among authors: kondo j. Chembiochem. 2025 Nov 8;26(21):e202500565. doi: 10.1002/cbic.202500565. Epub 2025 Oct 13. Chembiochem. 2025. PMID: 41078110 Free PMC article.

2

The structure of metallo-DNA with consecutive thymine-HgII-thymine base pairs explains positive entropy for the metallo base pair formation.

Yamaguchi H, Sebera J, Kondo J, Oda S, Komuro T, Kawamura T, Dairaku T, Kondo Y, Okamoto I, Ono A, Burda JV, Kojima C, Sychrovský V, Tanaka Y. Yamaguchi H, et al. Among authors: kondo j, kondo y. Nucleic Acids Res. 2014 Apr;42(6):4094-9. doi: 10.1093/nar/gkt1344. Epub 2013 Dec 26. Nucleic Acids Res. 2014. PMID: 24371287 Free PMC article.

3

Crystal structure of metallo DNA duplex containing consecutive Watson-Crick-like T-Hg(II)-T base pairs.

Kondo J, Yamada T, Hirose C, Okamoto I, Tanaka Y, Ono A. Kondo J, et al. Angew Chem Int Ed Engl. 2014 Feb 24;53(9):2385-8. doi: 10.1002/anie.201309066. Epub 2014 Jan 29. Angew Chem Int Ed Engl. 2014. PMID: 24478025

4

High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like C-Silver(I)-C Metallo-Base Pairs.

Kondo J, Tada Y, Dairaku T, Saneyoshi H, Okamoto I, Tanaka Y, Ono A. Kondo J, et al. Angew Chem Int Ed Engl. 2015 Nov 2;54(45):13323-6. doi: 10.1002/anie.201507894. Epub 2015 Oct 8. Angew Chem Int Ed Engl. 2015. PMID: 26448329

5

Structures, physicochemical properties, and applications of T-Hg(II)-T, C-Ag(I)-C, and other metallo-base-pairs.

Tanaka Y, Kondo J, Sychrovský V, Šebera J, Dairaku T, Saneyoshi H, Urata H, Torigoe H, Ono A. Tanaka Y, et al. Among authors: kondo j. Chem Commun (Camb). 2015 Dec 21;51(98):17343-60. doi: 10.1039/c5cc02693h. Chem Commun (Camb). 2015. PMID: 26466090 Review.

6

Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase.

Kanazawa H, Hoque MM, Tsunoda M, Suzuki K, Yamamoto T, Kawai G, Kondo J, Takénaka A. Kanazawa H, et al. Among authors: kondo j. Acta Crystallogr F Struct Biol Commun. 2016 Jul;72(Pt 7):507-15. doi: 10.1107/S2053230X16007767. Epub 2016 Jun 22. Acta Crystallogr F Struct Biol Commun. 2016. PMID: 27380367 Free PMC article.

7

Structure Determination of an Ag(I) -Mediated Cytosine-Cytosine Base Pair within DNA Duplex in Solution with (1) H/(15) N/(109) Ag NMR Spectroscopy.

Dairaku T, Furuita K, Sato H, Šebera J, Nakashima K, Kondo J, Yamanaka D, Kondo Y, Okamoto I, Ono A, Sychrovský V, Kojima C, Tanaka Y. Dairaku T, et al. Among authors: kondo j, kondo y. Chemistry. 2016 Sep 5;22(37):13028-31. doi: 10.1002/chem.201603048. Epub 2016 Aug 9. Chemistry. 2016. PMID: 27505707

8

Crystal structure of a novel RNA motif that allows for precise positioning of a single metal ion.

Kanazawa H, Kondo J. Kanazawa H, et al. Among authors: kondo j. J Inorg Biochem. 2017 Nov;176:140-143. doi: 10.1016/j.jinorgbio.2017.08.029. Epub 2017 Sep 21. J Inorg Biochem. 2017. PMID: 28898762

9

A metallo-DNA nanowire with uninterrupted one-dimensional silver array.

Kondo J, Tada Y, Dairaku T, Hattori Y, Saneyoshi H, Ono A, Tanaka Y. Kondo J, et al. Nat Chem. 2017 Oct;9(10):956-960. doi: 10.1038/nchem.2808. Epub 2017 Jul 3. Nat Chem. 2017. PMID: 28937663

10

Crystal structure of a DNA duplex containing four Ag(i) ions in consecutive dinuclear Ag(i)-mediated base pairs: 4-thiothymine-2Ag(i)-4-thiothymine.

Kondo J, Sugawara T, Saneyoshi H, Ono A. Kondo J, et al. Chem Commun (Camb). 2017 Aug 22;53(86):11747-11750. doi: 10.1039/c7cc06153f. Chem Commun (Camb). 2017. PMID: 28991300

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