Rosenberger G - Search Results

1

Phosphoproteomic analysis of metformin signaling in colorectal cancer cells elucidates mechanism of action and potential therapeutic opportunities.

Salovska B, Gao E, Müller-Dott S, Li W, Cordon CC, Wang S, Dugourd A, Rosenberger G, Saez-Rodriguez J, Liu Y. Salovska B, et al. Among authors: rosenberger g. Clin Transl Med. 2023 Feb;13(2):e1179. doi: 10.1002/ctm2.1179. Clin Transl Med. 2023. PMID: 36781298 Free PMC article.

2

xTract: software for characterizing conformational changes of protein complexes by quantitative cross-linking mass spectrometry.

Walzthoeni T, Joachimiak LA, Rosenberger G, Röst HL, Malmström L, Leitner A, Frydman J, Aebersold R. Walzthoeni T, et al. Among authors: rosenberger g. Nat Methods. 2015 Dec;12(12):1185-90. doi: 10.1038/nmeth.3631. Epub 2015 Oct 26. Nat Methods. 2015. PMID: 26501516 Free PMC article.

3

DIANA--algorithmic improvements for analysis of data-independent acquisition MS data.

Teleman J, Röst HL, Rosenberger G, Schmitt U, Malmström L, Malmström J, Levander F. Teleman J, et al. Among authors: rosenberger g. Bioinformatics. 2015 Feb 15;31(4):555-62. doi: 10.1093/bioinformatics/btu686. Epub 2014 Oct 27. Bioinformatics. 2015. PMID: 25348213 Free article.

4

Cross-link guided molecular modeling with ROSETTA.

Kahraman A, Herzog F, Leitner A, Rosenberger G, Aebersold R, Malmström L. Kahraman A, et al. Among authors: rosenberger g. PLoS One. 2013 Sep 17;8(9):e73411. doi: 10.1371/journal.pone.0073411. eCollection 2013. PLoS One. 2013. PMID: 24069194 Free PMC article.

5

Functional and structural properties of a novel protein and virulence factor (Protein sHIP) in Streptococcus pyogenes.

Wisniewska M, Happonen L, Kahn F, Varjosalo M, Malmström L, Rosenberger G, Karlsson C, Cazzamali G, Pozdnyakova I, Frick IM, Björck L, Streicher W, Malmström J, Wikström M. Wisniewska M, et al. Among authors: rosenberger g. J Biol Chem. 2014 Jun 27;289(26):18175-88. doi: 10.1074/jbc.M114.565978. Epub 2014 May 13. J Biol Chem. 2014. PMID: 24825900 Free PMC article.

6

Building high-quality assay libraries for targeted analysis of SWATH MS data.

Schubert OT, Gillet LC, Collins BC, Navarro P, Rosenberger G, Wolski WE, Lam H, Amodei D, Mallick P, MacLean B, Aebersold R. Schubert OT, et al. Among authors: rosenberger g. Nat Protoc. 2015 Mar;10(3):426-41. doi: 10.1038/nprot.2015.015. Epub 2015 Feb 12. Nat Protoc. 2015. PMID: 25675208

7

OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data.

Röst HL, Rosenberger G, Navarro P, Gillet L, Miladinović SM, Schubert OT, Wolski W, Collins BC, Malmström J, Malmström L, Aebersold R. Röst HL, et al. Among authors: rosenberger g. Nat Biotechnol. 2014 Mar;32(3):219-23. doi: 10.1038/nbt.2841. Nat Biotechnol. 2014. PMID: 24727770 No abstract available.

8

Interferon lambda 4 impairs hepatitis C viral antigen presentation and attenuates T cell responses.

Chen Q, Coto-Llerena M, Suslov A, Teixeira RD, Fofana I, Nuciforo S, Hofmann M, Thimme R, Hensel N, Lohmann V, Ng CKY, Rosenberger G, Wieland S, Heim MH. Chen Q, et al. Among authors: rosenberger g. Nat Commun. 2021 Aug 12;12(1):4882. doi: 10.1038/s41467-021-25218-x. Nat Commun. 2021. PMID: 34385466 Free PMC article.

9

OpenMS: a flexible open-source software platform for mass spectrometry data analysis.

Röst HL, Sachsenberg T, Aiche S, Bielow C, Weisser H, Aicheler F, Andreotti S, Ehrlich HC, Gutenbrunner P, Kenar E, Liang X, Nahnsen S, Nilse L, Pfeuffer J, Rosenberger G, Rurik M, Schmitt U, Veit J, Walzer M, Wojnar D, Wolski WE, Schilling O, Choudhary JS, Malmström L, Aebersold R, Reinert K, Kohlbacher O. Röst HL, et al. Among authors: rosenberger g. Nat Methods. 2016 Aug 30;13(9):741-8. doi: 10.1038/nmeth.3959. Nat Methods. 2016. PMID: 27575624

10

aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data.

Rosenberger G, Ludwig C, Röst HL, Aebersold R, Malmström L. Rosenberger G, et al. Bioinformatics. 2014 Sep 1;30(17):2511-3. doi: 10.1093/bioinformatics/btu200. Epub 2014 Apr 20. Bioinformatics. 2014. PMID: 24753486 Free PMC article.

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