Woodside MT - Search Results

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77 results

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Identifying Inhibitors of -1 Programmed Ribosomal Frameshifting in a Broad Spectrum of Coronaviruses.

Munshi S, Neupane K, Ileperuma SM, Halma MTJ, Kelly JA, Halpern CF, Dinman JD, Loerch S, Woodside MT. Munshi S, et al. Among authors: woodside mt. Viruses. 2022 Jan 18;14(2):177. doi: 10.3390/v14020177. Viruses. 2022. PMID: 35215770 Free PMC article.

Single-molecule force spectroscopy of the add adenine riboswitch relates folding to regulatory mechanism.

Neupane K, Yu H, Foster DA, Wang F, Woodside MT. Neupane K, et al. Among authors: woodside mt. Nucleic Acids Res. 2011 Sep 1;39(17):7677-87. doi: 10.1093/nar/gkr305. Epub 2011 Jun 8. Nucleic Acids Res. 2011. PMID: 21653559 Free PMC article.

Direct observation of multiple misfolding pathways in a single prion protein molecule.

Yu H, Liu X, Neupane K, Gupta AN, Brigley AM, Solanki A, Sosova I, Woodside MT. Yu H, et al. Among authors: woodside mt. Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5283-8. doi: 10.1073/pnas.1107736109. Epub 2012 Mar 15. Proc Natl Acad Sci U S A. 2012. PMID: 22421432 Free PMC article.

Energy landscape analysis of native folding of the prion protein yields the diffusion constant, transition path time, and rates.

Yu H, Gupta AN, Liu X, Neupane K, Brigley AM, Sosova I, Woodside MT. Yu H, et al. Among authors: woodside mt. Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14452-7. doi: 10.1073/pnas.1206190109. Epub 2012 Aug 20. Proc Natl Acad Sci U S A. 2012. PMID: 22908253 Free PMC article.

Programmed -1 frameshifting efficiency correlates with RNA pseudoknot conformational plasticity, not resistance to mechanical unfolding.

Ritchie DB, Foster DA, Woodside MT. Ritchie DB, et al. Among authors: woodside mt. Proc Natl Acad Sci U S A. 2012 Oct 2;109(40):16167-72. doi: 10.1073/pnas.1204114109. Epub 2012 Sep 17. Proc Natl Acad Sci U S A. 2012. PMID: 22988073 Free PMC article.

Transition path times for nucleic Acid folding determined from energy-landscape analysis of single-molecule trajectories.

Neupane K, Ritchie DB, Yu H, Foster DA, Wang F, Woodside MT. Neupane K, et al. Among authors: woodside mt. Phys Rev Lett. 2012 Aug 10;109(6):068102. doi: 10.1103/PhysRevLett.109.068102. Epub 2012 Aug 6. Phys Rev Lett. 2012. PMID: 23006308

Single-molecule assays for investigating protein misfolding and aggregation.

Hoffmann A, Neupane K, Woodside MT. Hoffmann A, et al. Among authors: woodside mt. Phys Chem Chem Phys. 2013 Jun 7;15(21):7934-48. doi: 10.1039/c3cp44564j. Epub 2013 Apr 23. Phys Chem Chem Phys. 2013. PMID: 23612887

Anti-frameshifting ligand reduces the conformational plasticity of the SARS virus pseudoknot.

Ritchie DB, Soong J, Sikkema WK, Woodside MT. Ritchie DB, et al. Among authors: woodside mt. J Am Chem Soc. 2014 Feb 12;136(6):2196-9. doi: 10.1021/ja410344b. Epub 2014 Jan 28. J Am Chem Soc. 2014. PMID: 24446874

Diverse metastable structures formed by small oligomers of α-synuclein probed by force spectroscopy.

Neupane K, Solanki A, Sosova I, Belov M, Woodside MT. Neupane K, et al. Among authors: woodside mt. PLoS One. 2014 Jan 24;9(1):e86495. doi: 10.1371/journal.pone.0086495. eCollection 2014. PLoS One. 2014. PMID: 24475132 Free PMC article.

Single-molecule force spectroscopy of rapidly fluctuating, marginally stable structures in the intrinsically disordered protein α-synuclein.

Solanki A, Neupane K, Woodside MT. Solanki A, et al. Among authors: woodside mt. Phys Rev Lett. 2014 Apr 18;112(15):158103. doi: 10.1103/PhysRevLett.112.158103. Epub 2014 Apr 16. Phys Rev Lett. 2014. PMID: 24785077

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