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Page 1
Long COVID after SARS-CoV-2 during pregnancy in the United States.
Zang C, Guth D, Bruno AM, Xu Z, Li H, Ammar N, Chew R, Guthe N, Hadley E, Kaushal R, Love T, McGrath BM, Patel RC, Seibert EC, Senathirajah Y, Singh SK, Wang F, Weiner MG, Wilkins KJ, Zhang Y, Metz TD, Hill E, Carton TW; RECOVER PCORnet EHR Consortia; RECOVER N3C EHR Consortia; RECOVER Pregnancy Consortia. Zang C, et al. Nat Commun. 2025 Apr 1;16(1):3005. doi: 10.1038/s41467-025-57849-9. Nat Commun. 2025. PMID: 40169569 Free PMC article.
Insights into Free Drug Release from Efficacious N-Acyl O-Aminophenol Duocarmycin Prodrugs.
Chakraborty N, Momirov J, Radakovic A, Chatterjee S, Kirchhoff AM, Kolb AL, West TJ, Sanchez BB, Martinez-Bartolome S, Saviola A, McClatchy D, Yates JR 3rd, Chen JS, Lairson LL, Felding BH, Boger DL. Chakraborty N, et al. ACS Chem Biol. 2025 Feb 21;20(2):442-454. doi: 10.1021/acschembio.4c00754. Epub 2025 Feb 9. ACS Chem Biol. 2025. PMID: 39924956
Effect of nirmatrelvir/ritonavir (Paxlovid) on hospitalization among adults with COVID-19: An electronic health record-based target trial emulation from N3C.
Bhatia A, Preiss AJ, Xiao X, Brannock MD, Alexander GC, Chew RF, Davis H, Fitzgerald M, Hill E, Kelly EP, Mehta HB, Madlock-Brown C, Wilkins KJ, Chute CG, Haendel M, Moffitt R, Pfaff ER; N3C Consortium. Bhatia A, et al. PLoS Med. 2025 Jan 17;22(1):e1004493. doi: 10.1371/journal.pmed.1004493. eCollection 2025 Jan. PLoS Med. 2025. PMID: 39823513 Free PMC article.
Dulce Digital-Me: results of a randomized comparative trial of static versus adaptive digital interventions for Latine adults with diabetes.
Philis-Tsimikas A, Fortmann AL, Clark T, Spierling Bagsic SR, Farcas E, Roesch SC, Schultz J, Gilmer TP, Godino JG, Savin KL, Chichmarenko M, Jones JA, Sandoval H, Gallo LC. Philis-Tsimikas A, et al. Ann Behav Med. 2025 Jan 4;59(1):kaae077. doi: 10.1093/abm/kaae077. Ann Behav Med. 2025. PMID: 39707158 Clinical Trial.
Finding Long-COVID: temporal topic modeling of electronic health records from the N3C and RECOVER programs.
O'Neil ST, Madlock-Brown C, Wilkins KJ, McGrath BM, Davis HE, Assaf GS, Wei H, Zareie P, French ET, Loomba J, McMurry JA, Zhou A, Chute CG, Moffitt RA, Pfaff ER, Yoo YJ, Leese P, Chew RF, Lieberman M, Haendel MA; N3C and RECOVER Consortia. O'Neil ST, et al. NPJ Digit Med. 2024 Oct 21;7(1):296. doi: 10.1038/s41746-024-01286-3. NPJ Digit Med. 2024. PMID: 39433942 Free PMC article.
SSRI use during acute COVID-19 and risk of long COVID among patients with depression.
Butzin-Dozier Z, Ji Y, Deshpande S, Hurwitz E, Anzalone AJ, Coyle J, Shi J, Mertens A, van der Laan MJ, Colford JM Jr, Patel RC, Hubbard AE; National COVID Cohort Collaborative (N3C) Consortium. Butzin-Dozier Z, et al. BMC Med. 2024 Oct 8;22(1):445. doi: 10.1186/s12916-024-03655-x. BMC Med. 2024. PMID: 39380062 Free PMC article.
Can artificial intelligence-derived coronary atherosclerotic characteristics using CCTA/CACS predict the future onset of atrial fibrillation?
Chiou A, Hermel M, Ruiz CR, van Rosendael A, Burton T, Calicchio F, Bagsic S, Hu E, Epstein E, Joye C, Newlander S, Salerno M, Bhavnani SP, Robinson A, Gonzalez J, Wesbey GE 3rd. Chiou A, et al. Eur Heart J Imaging Methods Pract. 2024 Sep 23;2(3):qyae098. doi: 10.1093/ehjimp/qyae098. eCollection 2024 Jul. Eur Heart J Imaging Methods Pract. 2024. PMID: 39391530 Free PMC article. No abstract available.
Optimizing COVID-19 testing resources use with wearable sensors.
Quer G, Kolbeinsson A, Radin JM, Foschini L, Pandit J. Quer G, et al. PLOS Digit Health. 2024 Sep 5;3(9):e0000584. doi: 10.1371/journal.pdig.0000584. eCollection 2024 Sep. PLOS Digit Health. 2024. PMID: 39236011 Free PMC article.
The prevalence of postacute sequelae of coronavirus disease 2019 in solid organ transplant recipients: Evaluation of risk in the National COVID Cohort Collaborative.
Vinson AJ, Schissel M, Anzalone AJ, Dai R, French ET, Olex AL, Lee SB, Ison M, Mannon RB; National COVID Cohort Collaborative. Vinson AJ, et al. Am J Transplant. 2024 Sep;24(9):1675-1689. doi: 10.1016/j.ajt.2024.06.001. Epub 2024 Jun 8. Am J Transplant. 2024. PMID: 38857785 Free PMC article.
Rapid Whole-Genome Sequencing and Clinical Management in the PICU: A Multicenter Cohort, 2016-2023.
Rodriguez KM, Vaught J, Salz L, Foley J, Boulil Z, Van Dongen-Trimmer HM, Whalen D, Oluchukwu O, Liu KC, Burton J, Syngal P, Vargas-Shiraishi O, Kingsmore SF, Sanford Kobayashi E, Coufal NG. Rodriguez KM, et al. Pediatr Crit Care Med. 2024 Aug 1;25(8):699-709. doi: 10.1097/PCC.0000000000003522. Epub 2024 Apr 26. Pediatr Crit Care Med. 2024. PMID: 38668387
Finding Long-COVID: Temporal Topic Modeling of Electronic Health Records from the N3C and RECOVER Programs.
O'Neil ST, Madlock-Brown C, Wilkins KJ, McGrath BM, Davis HE, Assaf GS, Wei H, Zareie P, French ET, Loomba J, McMurry JA, Zhou A, Chute CG, Moffitt RA, Pfaff ER, Yoo YJ, Leese P, Chew RF, Lieberman M, Haendel MA. O'Neil ST, et al. medRxiv [Preprint]. 2024 Jun 11:2023.09.11.23295259. doi: 10.1101/2023.09.11.23295259. medRxiv. 2024. Update in: NPJ Digit Med. 2024 Oct 21;7(1):296. doi: 10.1038/s41746-024-01286-3. PMID: 38947087 Free PMC article. Updated. Preprint.
Long COVID incidence in adults and children between 2020 and 2023: a real-world data study from the RECOVER Initiative.
Mandel H, Yoo Y, Allen A, Abedian S, Verzani Z, Karlson E, Kleinman L, Mudumbi P, Oliveira C, Muszynski J, Gross R, Carton T, Kim C, Taylor E, Park H, Divers J, Kelly J, Arnold J, Geary C, Zang C, Tantisira K, Rhee K, Koropsak M, Mohandas S, Vasey A, Weiner M, Mosa A, Haendel M, Chute C, Murphy S, O'Brien L, Szmuszkovicz J, Güthe N, Santana J, De A, Bogie A, Halabi K, Mohanraj L, Kinser P, Packard S, Tuttle K, Thorpe L, Moffitt R. Mandel H, et al. Res Sq [Preprint]. 2024 Apr 26:rs.3.rs-4124710. doi: 10.21203/rs.3.rs-4124710/v1. Res Sq. 2024. PMID: 38746290 Free PMC article. Preprint.
Outcomes of the Dulce Digital-COVID Aware (DD-CA) discharge texting platform for US/Mexico border Hispanic individuals with diabetes.
Spierling Bagsic SR, Fortmann AL, San Diego ERN, Soriano EC, Belasco R, Sandoval H, Bastian A, Padilla Neely OM, Talavera L, Leven E, Evancha N, Philis-Tsimikas A. Spierling Bagsic SR, et al. Diabetes Res Clin Pract. 2024 Apr;210:111614. doi: 10.1016/j.diabres.2024.111614. Epub 2024 Mar 12. Diabetes Res Clin Pract. 2024. PMID: 38484985 Free PMC article. Clinical Trial.
Repositioning the Early Pathology of Type 1 Diabetes to the Extraislet Vasculature.
Costanzo A, Clarke D, Holt M, Sharma S, Nagy K, Tan X, Kain L, Abe B, Luce S, Boitard C, Wyseure T, Mosnier LO, Su AI, Grimes C, Finn MG, Savage PB, Gottschalk M, Pettus J, Teyton L. Costanzo A, et al. J Immunol. 2024 Apr 1;212(7):1094-1104. doi: 10.4049/jimmunol.2300769. J Immunol. 2024. PMID: 38426888 Free PMC article.
Deep mutational scanning reveals functional constraints and antigenic variability of Lassa virus glycoprotein complex.
Carr CR, Crawford KHD, Murphy M, Galloway JG, Haddox HK, Matsen FA 4th, Andersen KG, King NP, Bloom JD. Carr CR, et al. bioRxiv [Preprint]. 2024 Feb 6:2024.02.05.579020. doi: 10.1101/2024.02.05.579020. bioRxiv. 2024. Update in: Immunity. 2024 Sep 10;57(9):2061-2076.e11. doi: 10.1016/j.immuni.2024.06.013. PMID: 38370709 Free PMC article. Updated. Preprint.
Effects of antineoplastic and immunomodulating agents on postvaccination SARS-CoV-2 breakthrough infections, antibody response, and serological cytokine profile.
New J, Cham J, Smith L, Puglisi L, Huynh T, Kurian S, Bagsic S, Fielding R, Hong L, Reddy P, Eum KS, Martin A, Barrick B, Marsh C, Quigley M, Nicholson LJ, Pandey AC. New J, et al. J Immunother Cancer. 2024 Jan 31;12(1):e008233. doi: 10.1136/jitc-2023-008233. J Immunother Cancer. 2024. PMID: 38296596 Free PMC article.
Genomic surveillance reveals dynamic shifts in the connectivity of COVID-19 epidemics.
Matteson NL, Hassler GW, Kurzban E, Schwab MA, Perkins SA, Gangavarapu K, Levy JI, Parker E, Pride D, Hakim A, De Hoff P, Cheung W, Castro-Martinez A, Rivera A, Veder A, Rivera A, Wauer C, Holmes J, Wilson J, Ngo SN, Plascencia A, Lawrence ES, Smoot EW, Eisner ER, Tsai R, Chacón M, Baer NA, Seaver P, Salido RA, Aigner S, Ngo TT, Barber T, Ostrander T, Fielding-Miller R, Simmons EH, Zazueta OE, Serafin-Higuera I, Sanchez-Alavez M, Moreno-Camacho JL, García-Gil A, Murphy Schafer AR, McDonald E, Corrigan J, Malone JD, Stous S, Shah S, Moshiri N, Weiss A, Anderson C, Aceves CM, Spencer EG, Hufbauer EC, Lee JJ, King AJ, Ramesh KS, Nguyen KN, Saucedo K, Robles-Sikisaka R, Fisch KM, Gonias SL, Birmingham A, McDonald D, Karthikeyan S, Martin NK, Schooley RT, Negrete AJ, Reyna HJ, Chavez JR, Garcia ML, Cornejo-Bravo JM, Becker D, Isaksson M, Washington NL, Lee W, Garfein RS, Luna-Ruiz Esparza MA, Alcántar-Fernández J, Henson B, Jepsen K, Olivares-Flores B, Barrera-Badillo G, Lopez-Martínez I, Ramírez-González JE, Flores-León R, Kingsmore SF, Sanders A, Pradenas A, White B, Matthews G, Hale M, McLawhon RW, Reed SL, Winbush T, McHardy IH, Fielding RA, Nicholson L, Quigley MM, Harding A, Mend… See abstract for full author list ➔ Matteson NL, et al. Cell. 2023 Dec 21;186(26):5690-5704.e20. doi: 10.1016/j.cell.2023.11.024. Epub 2023 Dec 14. Cell. 2023. PMID: 38101407 Free PMC article.
Sample average treatment effect on the treated (SATT) analysis using counterfactual explanation identifies BMT and SARS-CoV-2 vaccination as protective risk factors associated with COVID-19 severity and survival in patients with multiple myeloma.
Mitra AK, Mukherjee UK, Mazumder S, Madhira V, Bergquist T, Shao YR, Liu F, Song Q, Su J, Kumar S, Bates BA, Sharafeldin N, Topaloglu U; National COVID Cohort Collaborative Consortium. Mitra AK, et al. Blood Cancer J. 2023 Dec 7;13(1):180. doi: 10.1038/s41408-023-00901-y. Blood Cancer J. 2023. PMID: 38057320 Free PMC article.
SARS-CoV-2 Infection is Associated with an Increase in New Diagnoses of Schizophrenia Spectrum and Psychotic Disorder: A Study Using the US National COVID Cohort Collaborative (N3C).
Rahman A, Russell M, Zheng W, Eckrich D, Ahmed I. Rahman A, et al. medRxiv [Preprint]. 2023 Dec 5:2023.12.05.23299473. doi: 10.1101/2023.12.05.23299473. medRxiv. 2023. Update in: PLoS One. 2024 May 30;19(5):e0295891. doi: 10.1371/journal.pone.0295891. PMID: 38106125 Free PMC article. Updated. Preprint.
Nonelective coronary artery bypass graft outcomes are adversely impacted by Coronavirus disease 2019 infection, but not altered processes of care: A National COVID Cohort Collaborative and National Surgery Quality Improvement Program analysis.
Grimsley EA, Torikashvili JV, Janjua HM, Read MD, Kothari AN, Verhagen NB, Pietrobon R, Kuo PC, Rogers MP; N3C Consortium. Grimsley EA, et al. JTCVS Open. 2023 Sep 22;16:342-352. doi: 10.1016/j.xjon.2023.09.020. eCollection 2023 Dec. JTCVS Open. 2023. PMID: 38204718 Free PMC article.
Large-scale rare variant burden testing in Parkinson's disease.
Makarious MB, Lake J, Pitz V, Ye Fu A, Guidubaldi JL, Solsberg CW, Bandres-Ciga S, Leonard HL, Kim JJ, Billingsley KJ, Grenn FP, Jerez PA, Alvarado CX, Iwaki H, Ta M, Vitale D, Hernandez D, Torkamani A, Ryten M, Hardy J; UK Brain Expression Consortium (UKBEC),; Scholz SW, Traynor BJ, Dalgard CL, Ehrlich DJ, Tanaka T, Ferrucci L, Beach TG, Serrano GE, Real R, Morris HR, Ding J, Gibbs JR, Singleton AB, Nalls MA, Bhangale T, Blauwendraat C. Makarious MB, et al. Brain. 2023 Nov 2;146(11):4622-4632. doi: 10.1093/brain/awad214. Brain. 2023. PMID: 37348876 Free PMC article.
Vagal sensory neurons mediate the Bezold-Jarisch reflex and induce syncope.
Lovelace JW, Ma J, Yadav S, Chhabria K, Shen H, Pang Z, Qi T, Sehgal R, Zhang Y, Bali T, Vaissiere T, Tan S, Liu Y, Rumbaugh G, Ye L, Kleinfeld D, Stringer C, Augustine V. Lovelace JW, et al. Nature. 2023 Nov;623(7986):387-396. doi: 10.1038/s41586-023-06680-7. Epub 2023 Nov 1. Nature. 2023. PMID: 37914931 Free PMC article.
Severity of Prior Coronavirus Disease 2019 is Associated With Postoperative Outcomes After Major Inpatient Surgery.
Verhagen NB, SenthilKumar G, Jaraczewski T, Koerber NK, Merrill JR, Flitcroft MA, Szabo A, Banerjee A, Yang X, Taylor BW, Figueroa Castro CE, Yen TWF, Clarke CN, Lauer K, Pfeifer KJ, Gould JC, Kothari AN; N3C Consortium. Verhagen NB, et al. Ann Surg. 2023 Nov 1;278(5):e949-e956. doi: 10.1097/SLA.0000000000006035. Epub 2023 Jul 21. Ann Surg. 2023. PMID: 37476995 Free PMC article.
Risk factors associated with post-acute sequelae of SARS-CoV-2: an N3C and NIH RECOVER study.
Hill EL, Mehta HB, Sharma S, Mane K, Singh SK, Xie C, Cathey E, Loomba J, Russell S, Spratt H, DeWitt PE, Ammar N, Madlock-Brown C, Brown D, McMurry JA, Chute CG, Haendel MA, Moffitt R, Pfaff ER, Bennett TD; N3C Consortium; and the RECOVER Consortium. Hill EL, et al. BMC Public Health. 2023 Oct 25;23(1):2103. doi: 10.1186/s12889-023-16916-w. BMC Public Health. 2023. PMID: 37880596 Free PMC article.
Effectiveness of various COVID-19 vaccine regimens among 10.4 million patients from the National COVID Cohort Collaborative during Pre-Delta to Omicron periods - United States, 11 December 2020 to 30 June 2022.
Fu Y, Wu K, Wang Z, Yang H, Chen Y, Wu L, Yanagihara R, Hedges JR, Wang H, Deng Y; N3C consortium. Fu Y, et al. Vaccine. 2023 Oct 6;41(42):6339-6349. doi: 10.1016/j.vaccine.2023.08.069. Epub 2023 Sep 22. Vaccine. 2023. PMID: 37741761 Free PMC article.
Predictive models of long COVID.
Antony B, Blau H, Casiraghi E, Loomba JJ, Callahan TJ, Laraway BJ, Wilkins KJ, Antonescu CC, Valentini G, Williams AE, Robinson PN, Reese JT, Murali TM; N3C consortium. Antony B, et al. EBioMedicine. 2023 Oct;96:104777. doi: 10.1016/j.ebiom.2023.104777. Epub 2023 Sep 4. EBioMedicine. 2023. PMID: 37672869 Free PMC article.
Who is pregnant? Defining real-world data-based pregnancy episodes in the National COVID Cohort Collaborative (N3C).
Jones SE, Bradwell KR, Chan LE, McMurry JA, Olson-Chen C, Tarleton J, Wilkins KJ, Ly V, Ljazouli S, Qin Q, Faherty EG, Lau YK, Xie C, Kao YH, Liebman MN, Mariona F, Challa AP, Li L, Ratcliffe SJ, Haendel MA, Patel RC, Hill EL; N3C Consortium. Jones SE, et al. JAMIA Open. 2023 Aug 16;6(3):ooad067. doi: 10.1093/jamiaopen/ooad067. eCollection 2023 Oct. JAMIA Open. 2023. PMID: 37600074 Free PMC article.
DrugMechDB: A Curated Database of Drug Mechanisms.
Gonzalez-Cavazos AC, Tanska A, Mayers M, Carvalho-Silva D, Sridharan B, Rewers PA, Sankarlal U, Jagannathan L, Su AI. Gonzalez-Cavazos AC, et al. Sci Data. 2023 Sep 16;10(1):632. doi: 10.1038/s41597-023-02534-z. Sci Data. 2023. PMID: 37717042 Free PMC article.
Process evaluation of Dulce Digital-Me: an adaptive mobile health (mHealth) intervention for underserved Hispanics with diabetes.
Spierling Bagsic SR, Savin KL, Soriano EC, San Diego ERN, Orendain N, Clark T, Sandoval H, Chichmarenko M, Perez-Ramirez P, Farcas E, Godino J, Gallo LC, Philis-Tsimikas A, Fortmann AL. Spierling Bagsic SR, et al. Transl Behav Med. 2023 Sep 12;13(9):635-644. doi: 10.1093/tbm/ibad020. Transl Behav Med. 2023. PMID: 37011033 Free PMC article.
NAIR: Network Analysis of Immune Repertoire.
Yang H, Cham J, Neal BP, Fan Z, He T, Zhang L. Yang H, et al. Front Immunol. 2023 Jul 7;14:1181825. doi: 10.3389/fimmu.2023.1181825. eCollection 2023. Front Immunol. 2023. PMID: 37614227 Free PMC article.
Preoperative SARS-CoV-2 infection increases risk of early postoperative cardiovascular complications following noncardiac surgery.
SenthilKumar G, Verhagen NB, Sheriff SA, Yang X, Figueroa Castro CE, Szabo A, Taylor BW, Wainaina N, Lauer K, Gould JC, Kothari AN; N3C Consortium. SenthilKumar G, et al. Am J Physiol Heart Circ Physiol. 2023 Jun 1;324(6):H721-H731. doi: 10.1152/ajpheart.00097.2023. Epub 2023 Mar 17. Am J Physiol Heart Circ Physiol. 2023. PMID: 36930659 Free PMC article.
Effect of Nirmatrelvir/Ritonavir (Paxlovid) on Hospitalization among Adults with COVID-19: an EHR-based Target Trial Emulation from N3C.
Bhatia A, Preiss AJ, Xiao X, Brannock MD, Alexander GC, Chew RF, Fitzgerald M, Hill E, Kelly EP, Mehta HB, Madlock-Brown C, Wilkins KJ, Chute CG, Haendel M, Moffitt R, Pfaff ER; N3C Consortium. Bhatia A, et al. medRxiv [Preprint]. 2023 May 4:2023.05.03.23289084. doi: 10.1101/2023.05.03.23289084. medRxiv. 2023. Update in: PLoS Med. 2025 Jan 17;22(1):e1004493. doi: 10.1371/journal.pmed.1004493. PMID: 37205340 Free PMC article. Updated. Preprint.
Severity of Prior COVID-19 Infection is Associated with Postoperative Outcomes Following Major Inpatient Surgery.
Verhagen NB, SenthilKumar G, Jaraczewski T, Koerber NK, Merrill JR, Flitcroft MA, Szabo A, Banerjee A, Yang X, Taylor BW, Castro CEF, Yen TWF, Clarke CN, Lauer K, Pfeifer KJ, Gould JC, Kothari AN. Verhagen NB, et al. medRxiv [Preprint]. 2023 Apr 17:2023.04.12.23288412. doi: 10.1101/2023.04.12.23288412. medRxiv. 2023. Update in: Ann Surg. 2023 Nov 1;278(5):e949-e956. doi: 10.1097/SLA.0000000000006035. PMID: 37131614 Free PMC article. Updated. Preprint.
Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations.
Gangavarapu K, Latif AA, Mullen JL, Alkuzweny M, Hufbauer E, Tsueng G, Haag E, Zeller M, Aceves CM, Zaiets K, Cano M, Zhou X, Qian Z, Sattler R, Matteson NL, Levy JI, Lee RTC, Freitas L, Maurer-Stroh S; GISAID Core and Curation Team; Suchard MA, Wu C, Su AI, Andersen KG, Hughes LD. Gangavarapu K, et al. Nat Methods. 2023 Apr;20(4):512-522. doi: 10.1038/s41592-023-01769-3. Epub 2023 Feb 23. Nat Methods. 2023. PMID: 36823332 Free PMC article.
Insights into the perinatal phenotype of Kabuki syndrome in infants identified by genome-wide sequencing.
Wigby K, Hammer M, Tokita M, Patel P, Jones MC, Larson A, Bartolomei FV, Dykzeul N, Slavotinek A, Yip T, Bandres-Ciga S, Simpson BN, Suhrie K, Shankar S, Veith R, Bragg J, Powell C, Kingsmore SF, Dimmock D, Maron J, Davis J, Del Campo M. Wigby K, et al. Am J Med Genet A. 2023 Apr;191(4):930-940. doi: 10.1002/ajmg.a.63097. Epub 2023 Jan 18. Am J Med Genet A. 2023. PMID: 36651673
A method for comparing multiple imputation techniques: A case study on the U.S. national COVID cohort collaborative.
Casiraghi E, Wong R, Hall M, Coleman B, Notaro M, Evans MD, Tronieri JS, Blau H, Laraway B, Callahan TJ, Chan LE, Bramante CT, Buse JB, Moffitt RA, Stürmer T, Johnson SG, Raymond Shao Y, Reese J, Robinson PN, Paccanaro A, Valentini G, Huling JD, Wilkins KJ; N3C Consortium. Casiraghi E, et al. J Biomed Inform. 2023 Mar;139:104295. doi: 10.1016/j.jbi.2023.104295. Epub 2023 Jan 27. J Biomed Inform. 2023. PMID: 36716983 Free PMC article.
Long COVID: major findings, mechanisms and recommendations.
Davis HE, McCorkell L, Vogel JM, Topol EJ. Davis HE, et al. Nat Rev Microbiol. 2023 Mar;21(3):133-146. doi: 10.1038/s41579-022-00846-2. Epub 2023 Jan 13. Nat Rev Microbiol. 2023. PMID: 36639608 Free PMC article. Review.
Coding long COVID: characterizing a new disease through an ICD-10 lens.
Pfaff ER, Madlock-Brown C, Baratta JM, Bhatia A, Davis H, Girvin A, Hill E, Kelly E, Kostka K, Loomba J, McMurry JA, Wong R, Bennett TD, Moffitt R, Chute CG, Haendel M; N3C Consortium; RECOVER Consortium. Pfaff ER, et al. BMC Med. 2023 Feb 16;21(1):58. doi: 10.1186/s12916-023-02737-6. BMC Med. 2023. PMID: 36793086 Free PMC article.
Genomic and phenotypic analyses suggest moderate fitness differences among Zika virus lineages.
Oliveira G, Vogels CBF, Zolfaghari A, Saraf S, Klitting R, Weger-Lucarelli J, P Leon K, Ontiveros CO, Agarwal R, Tsetsarkin KA, Harris E, Ebel GD, Wohl S, Grubaugh ND, Andersen KG. Oliveira G, et al. PLoS Negl Trop Dis. 2023 Feb 8;17(2):e0011055. doi: 10.1371/journal.pntd.0011055. eCollection 2023 Feb. PLoS Negl Trop Dis. 2023. PMID: 36753510 Free PMC article.
Wastewater surveillance for public health.
Levy JI, Andersen KG, Knight R, Karthikeyan S. Levy JI, et al. Science. 2023 Jan 6;379(6627):26-27. doi: 10.1126/science.ade2503. Epub 2023 Jan 5. Science. 2023. PMID: 36603089 Free PMC article.
SARS-CoV-2 Reinfection is Preceded by Unique Biomarkers and Related to Initial Infection Timing and Severity: an N3C RECOVER EHR-Based Cohort Study.
Hadley E, Yoo YJ, Patel S, Zhou A, Laraway B, Wong R, Preiss A, Chew R, Davis H, Chute CG, Pfaff ER, Loomba J, Haendel M, Hill E, Moffitt R; N3C and RECOVER consortia On behalf of the N3C and RECOVER consortia. Hadley E, et al. medRxiv [Preprint]. 2023 Jan 5:2023.01.03.22284042. doi: 10.1101/2023.01.03.22284042. medRxiv. 2023. PMID: 36656776 Free PMC article. Preprint.
Generalisable long COVID subtypes: findings from the NIH N3C and RECOVER programmes.
Reese JT, Blau H, Casiraghi E, Bergquist T, Loomba JJ, Callahan TJ, Laraway B, Antonescu C, Coleman B, Gargano M, Wilkins KJ, Cappelletti L, Fontana T, Ammar N, Antony B, Murali TM, Caufield JH, Karlebach G, McMurry JA, Williams A, Moffitt R, Banerjee J, Solomonides AE, Davis H, Kostka K, Valentini G, Sahner D, Chute CG, Madlock-Brown C, Haendel MA, Robinson PN; N3C Consortium; RECOVER Consortium. Reese JT, et al. EBioMedicine. 2023 Jan;87:104413. doi: 10.1016/j.ebiom.2022.104413. Epub 2022 Dec 21. EBioMedicine. 2023. PMID: 36563487 Free PMC article.
Sensor-based surveillance for digitising real-time COVID-19 tracking in the USA (DETECT): a multivariable, population-based, modelling study.
Radin JM, Quer G, Pandit JA, Gadaleta M, Baca-Motes K, Ramos E, Coughlin E, Quartuccio K, Kheterpal V, Wolansky LM, Steinhubl SR, Topol EJ. Radin JM, et al. Lancet Digit Health. 2022 Nov;4(11):e777-e786. doi: 10.1016/S2589-7500(22)00156-X. Epub 2022 Sep 22. Lancet Digit Health. 2022. PMID: 36154810 Free PMC article.
Endocannabinoid dysfunction in neurological disease: neuro-ocular DAGLA-related syndrome.
Bainbridge MN, Mazumder A, Ogasawara D, Abou Jamra R, Bernard G, Bertini E, Burglen L, Cope H, Crawford A, Derksen A, Dure L, Gantz E, Koch-Hogrebe M, Hurst ACE, Mahida S, Marshall P, Micalizzi A, Novelli A, Peng H; Rady Children's Institute for Genomic Medicine; Rodriguez D, Robbins SL, Rutledge SL, Scalise R, Schließke S, Shashi V, Srivastava S, Thiffault I, Topol S; Undiagnosed Disease Network; Qebibo L, Wieczorek D, Cravatt B, Haricharan S, Torkamani A, Friedman J. Bainbridge MN, et al. Brain. 2022 Oct 21;145(10):3383-3390. doi: 10.1093/brain/awac223. Brain. 2022. PMID: 35737950 Free PMC article.
Profiling the NOTCH2NLC GGC Repeat Expansion in Parkinson's Disease in the European Population.
Billingsley KJ, Alvarez Jerez P, Grenn FP, Bandres-Ciga S, Malik L, Hernandez D, Torkamani A, Ryten M, Hardy J; United Kingdom Brain Expression Consortium (UKBEC); Scholz SW, Traynor BJ, Dalgard CL, Ehrlich DJ, Tanaka T, Ferrucci L, Beach TG, Serrano GE, Ding J, Gibbs JR, Blauwendraat C, Singleton AB. Billingsley KJ, et al. Mov Disord. 2022 Oct;37(10):2161-2162. doi: 10.1002/mds.29155. Epub 2022 Jul 22. Mov Disord. 2022. PMID: 35866887 No abstract available.
Coding Long COVID: Characterizing a new disease through an ICD-10 lens.
Pfaff ER, Madlock-Brown C, Baratta JM, Bhatia A, Davis H, Girvin A, Hill E, Kelly L, Kostka K, Loomba J, McMurry JA, Wong R, Bennett TD, Moffitt R, Chute CG, Haendel M; N3C Consortium; RECOVER Consortium. Pfaff ER, et al. medRxiv [Preprint]. 2022 Sep 2:2022.04.18.22273968. doi: 10.1101/2022.04.18.22273968. medRxiv. 2022. Update in: BMC Med. 2023 Feb 16;21(1):58. doi: 10.1186/s12916-023-02737-6. PMID: 36093345 Free PMC article. Updated. Preprint.
Multimodal biomedical AI.
Acosta JN, Falcone GJ, Rajpurkar P, Topol EJ. Acosta JN, et al. Nat Med. 2022 Sep;28(9):1773-1784. doi: 10.1038/s41591-022-01981-2. Epub 2022 Sep 15. Nat Med. 2022. PMID: 36109635 Review.
A genome sequencing system for universal newborn screening, diagnosis, and precision medicine for severe genetic diseases.
Kingsmore SF, Smith LD, Kunard CM, Bainbridge M, Batalov S, Benson W, Blincow E, Caylor S, Chambers C, Del Angel G, Dimmock DP, Ding Y, Ellsworth K, Feigenbaum A, Frise E, Green RC, Guidugli L, Hall KP, Hansen C, Hobbs CA, Kahn SD, Kiel M, Van Der Kraan L, Krilow C, Kwon YH, Madhavrao L, Le J, Lefebvre S, Mardach R, Mowrey WR, Oh D, Owen MJ, Powley G, Scharer G, Shelnutt S, Tokita M, Mehtalia SS, Oriol A, Papadopoulos S, Perry J, Rosales E, Sanford E, Schwartz S, Tran D, Reese MG, Wright M, Veeraraghavan N, Wigby K, Willis MJ, Wolen AR, Defay T. Kingsmore SF, et al. Am J Hum Genet. 2022 Sep 1;109(9):1605-1619. doi: 10.1016/j.ajhg.2022.08.003. Epub 2022 Aug 24. Am J Hum Genet. 2022. PMID: 36007526 Free PMC article. Review.
Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission.
Karthikeyan S, Levy JI, De Hoff P, Humphrey G, Birmingham A, Jepsen K, Farmer S, Tubb HM, Valles T, Tribelhorn CE, Tsai R, Aigner S, Sathe S, Moshiri N, Henson B, Mark AM, Hakim A, Baer NA, Barber T, Belda-Ferre P, Chacón M, Cheung W, Cresini ES, Eisner ER, Lastrella AL, Lawrence ES, Marotz CA, Ngo TT, Ostrander T, Plascencia A, Salido RA, Seaver P, Smoot EW, McDonald D, Neuhard RM, Scioscia AL, Satterlund AM, Simmons EH, Abelman DB, Brenner D, Bruner JC, Buckley A, Ellison M, Gattas J, Gonias SL, Hale M, Hawkins F, Ikeda L, Jhaveri H, Johnson T, Kellen V, Kremer B, Matthews G, McLawhon RW, Ouillet P, Park D, Pradenas A, Reed S, Riggs L, Sanders A, Sollenberger B, Song A, White B, Winbush T, Aceves CM, Anderson C, Gangavarapu K, Hufbauer E, Kurzban E, Lee J, Matteson NL, Parker E, Perkins SA, Ramesh KS, Robles-Sikisaka R, Schwab MA, Spencer E, Wohl S, Nicholson L, McHardy IH, Dimmock DP, Hobbs CA, Bakhtar O, Harding A, Mendoza A, Bolze A, Becker D, Cirulli ET, Isaksson M, Schiabor Barrett KM, Washington NL, Malone JD, Schafer AM, Gurfield N, Stous S, Fielding-Miller R, Garfein RS, Gaines T, Anderson C, Martin NK, Schooley R, Austin B, MacCannell DR, Kingsmore SF, Lee W, Shah S, Mc… See abstract for full author list ➔ Karthikeyan S, et al. Nature. 2022 Sep;609(7925):101-108. doi: 10.1038/s41586-022-05049-6. Epub 2022 Jul 7. Nature. 2022. PMID: 35798029 Free PMC article.
The Role of Genome Sequencing in Neonatal Intensive Care Units.
Kingsmore SF, Cole FS. Kingsmore SF, et al. Annu Rev Genomics Hum Genet. 2022 Aug 31;23:427-448. doi: 10.1146/annurev-genom-120921-103442. Epub 2022 Jun 8. Annu Rev Genomics Hum Genet. 2022. PMID: 35676073 Free PMC article. Review.
Metformin is Associated with Reduced COVID-19 Severity in Patients with Prediabetes.
Chan LE, Casiraghi E, Laraway B, Coleman B, Blau H, Zaman A, Harris N, Wilkins K, Gargano M, Valentini G, Sahner D, Haendel M, Robinson PN, Bramante C, Reese J. Chan LE, et al. medRxiv [Preprint]. 2022 Aug 30:2022.08.29.22279355. doi: 10.1101/2022.08.29.22279355. medRxiv. 2022. Update in: Diabetes Res Clin Pract. 2022 Dec;194:110157. doi: 10.1016/j.diabres.2022.110157. PMID: 36093353 Free PMC article. Updated. Preprint.
The Huanan Seafood Wholesale Market in Wuhan was the early epicenter of the COVID-19 pandemic.
Worobey M, Levy JI, Malpica Serrano L, Crits-Christoph A, Pekar JE, Goldstein SA, Rasmussen AL, Kraemer MUG, Newman C, Koopmans MPG, Suchard MA, Wertheim JO, Lemey P, Robertson DL, Garry RF, Holmes EC, Rambaut A, Andersen KG. Worobey M, et al. Science. 2022 Aug 26;377(6609):951-959. doi: 10.1126/science.abp8715. Epub 2022 Jul 26. Science. 2022. PMID: 35881010 Free PMC article.
The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2.
Pekar JE, Magee A, Parker E, Moshiri N, Izhikevich K, Havens JL, Gangavarapu K, Malpica Serrano LM, Crits-Christoph A, Matteson NL, Zeller M, Levy JI, Wang JC, Hughes S, Lee J, Park H, Park MS, Ching Zi Yan K, Lin RTP, Mat Isa MN, Noor YM, Vasylyeva TI, Garry RF, Holmes EC, Rambaut A, Suchard MA, Andersen KG, Worobey M, Wertheim JO. Pekar JE, et al. Science. 2022 Aug 26;377(6609):960-966. doi: 10.1126/science.abp8337. Epub 2022 Jul 26. Science. 2022. PMID: 35881005 Free PMC article.
A Chemical Proteomic Map of Heme-Protein Interactions.
Homan RA, Jadhav AM, Conway LP, Parker CG. Homan RA, et al. J Am Chem Soc. 2022 Aug 24;144(33):15013-15019. doi: 10.1021/jacs.2c06104. Epub 2022 Aug 12. J Am Chem Soc. 2022. PMID: 35960875 Free PMC article.
Risk Factors Associated with Post-Acute Sequelae of SARS-CoV-2 in an EHR Cohort: A National COVID Cohort Collaborative (N3C) Analysis as part of the NIH RECOVER program.
Hill E, Mehta H, Sharma S, Mane K, Xie C, Cathey E, Loomba J, Russell S, Spratt H, DeWitt PE, Ammar N, Madlock-Brown C, Brown D, McMurry JA, Chute CG, Haendel MA, Moffitt R, Pfaff ER, Bennett TD; N3C Consortium; RECOVER Consortium. Hill E, et al. medRxiv [Preprint]. 2022 Aug 17:2022.08.15.22278603. doi: 10.1101/2022.08.15.22278603. medRxiv. 2022. PMID: 36032983 Free PMC article. Preprint.
Regional connectivity drove bidirectional transmission of SARS-CoV-2 in the Middle East during travel restrictions.
Parker E, Anderson C, Zeller M, Tibi A, Havens JL, Laroche G, Benlarbi M, Ariana A, Robles-Sikisaka R, Latif AA, Watts A, Awidi A, Jaradat SA, Gangavarapu K, Ramesh K, Kurzban E, Matteson NL, Han AX, Hughes LD, McGraw M, Spencer E, Nicholson L, Khan K, Suchard MA, Wertheim JO, Wohl S, Côté M, Abdelnour A, Andersen KG, Abu-Dayyeh I. Parker E, et al. Nat Commun. 2022 Aug 15;13(1):4784. doi: 10.1038/s41467-022-32536-1. Nat Commun. 2022. PMID: 35970983 Free PMC article.
Who is pregnant? defining real-world data-based pregnancy episodes in the National COVID Cohort Collaborative (N3C).
Jones S, Bradwell KR, Chan LE, Olson-Chen C, Tarleton J, Wilkins KJ, Qin Q, Faherty EG, Lau YK, Xie C, Kao YH, Liebman MN, Mariona F, Challa A, Li L, Ratcliffe SJ, McMurry JA, Haendel MA, Patel RC, Hill EL. Jones S, et al. medRxiv [Preprint]. 2022 Aug 6:2022.08.04.22278439. doi: 10.1101/2022.08.04.22278439. medRxiv. 2022. Update in: JAMIA Open. 2023 Aug 16;6(3):ooad067. doi: 10.1093/jamiaopen/ooad067. PMID: 35982668 Free PMC article. Updated. Preprint.
The digital phenotype of vaccination.
Quer G, Topol EJ, Steinhubl SR. Quer G, et al. Nat Biotechnol. 2022 Aug;40(8):1174-1175. doi: 10.1038/s41587-022-01417-9. Nat Biotechnol. 2022. PMID: 35922570 Free PMC article. No abstract available.
Neighborhood Environment and Metabolic Risk in Hispanics/Latinos From the Hispanic Community Health Study/Study of Latinos.
Gallo LC, Savin KL, Jankowska MM, Roesch SC, Sallis JF, Sotres-Alvarez D, Talavera GA, Perreira KM, Isasi CR, Penedo FJ, Llabre MM, Estrella ML, Chambers EC, Daviglus ML, Brown SC, Carlson JA. Gallo LC, et al. Am J Prev Med. 2022 Aug;63(2):195-203. doi: 10.1016/j.amepre.2022.01.025. Epub 2022 Mar 29. Am J Prev Med. 2022. PMID: 35365395 Free PMC article.
An automated 13.5 hour system for scalable diagnosis and acute management guidance for genetic diseases.
Owen MJ, Lefebvre S, Hansen C, Kunard CM, Dimmock DP, Smith LD, Scharer G, Mardach R, Willis MJ, Feigenbaum A, Niemi AK, Ding Y, Van Der Kraan L, Ellsworth K, Guidugli L, Lajoie BR, McPhail TK, Mehtalia SS, Chau KK, Kwon YH, Zhu Z, Batalov S, Chowdhury S, Rego S, Perry J, Speziale M, Nespeca M, Wright MS, Reese MG, De La Vega FM, Azure J, Frise E, Rigby CS, White S, Hobbs CA, Gilmer S, Knight G, Oriol A, Lenberg J, Nahas SA, Perofsky K, Kim K, Carroll J, Coufal NG, Sanford E, Wigby K, Weir J, Thomson VS, Fraser L, Lazare SS, Shin YH, Grunenwald H, Lee R, Jones D, Tran D, Gross A, Daigle P, Case A, Lue M, Richardson JA, Reynders J, Defay T, Hall KP, Veeraraghavan N, Kingsmore SF. Owen MJ, et al. Nat Commun. 2022 Jul 26;13(1):4057. doi: 10.1038/s41467-022-31446-6. Nat Commun. 2022. PMID: 35882841 Free PMC article.
Smartphone apps in the COVID-19 pandemic.
Pandit JA, Radin JM, Quer G, Topol EJ. Pandit JA, et al. Nat Biotechnol. 2022 Jul;40(7):1013-1022. doi: 10.1038/s41587-022-01350-x. Epub 2022 Jun 20. Nat Biotechnol. 2022. PMID: 35726090 Review.
Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations.
Gangavarapu K, Latif AA, Mullen JL, Alkuzweny M, Hufbauer E, Tsueng G, Haag E, Zeller M, Aceves CM, Zaiets K, Cano M, Zhou J, Qian Z, Sattler R, Matteson NL, Levy JI, Lee RT, Freitas L, Maurer-Stroh S; GISAID core and curation team; Suchard MA, Wu C, Su AI, Andersen KG, Hughes LD. Gangavarapu K, et al. Res Sq [Preprint]. 2022 Jun 28:rs.3.rs-1723829. doi: 10.21203/rs.3.rs-1723829/v1. Res Sq. 2022. Update in: Nat Methods. 2023 Apr;20(4):512-522. doi: 10.1038/s41592-023-01769-3. PMID: 35794893 Free PMC article. Updated. Preprint.
Harmonizing units and values of quantitative data elements in a very large nationally pooled electronic health record (EHR) dataset.
Bradwell KR, Wooldridge JT, Amor B, Bennett TD, Anand A, Bremer C, Yoo YJ, Qian Z, Johnson SG, Pfaff ER, Girvin AT, Manna A, Niehaus EA, Hong SS, Zhang XT, Zhu RL, Bissell M, Qureshi N, Saltz J, Haendel MA, Chute CG, Lehmann HP, Moffitt RA; N3C Consortium. Bradwell KR, et al. J Am Med Inform Assoc. 2022 Jun 14;29(7):1172-1182. doi: 10.1093/jamia/ocac054. J Am Med Inform Assoc. 2022. PMID: 35435957 Free PMC article.
Wastewater sequencing uncovers early, cryptic SARS-CoV-2 variant transmission.
Karthikeyan S, Levy JI, De Hoff P, Humphrey G, Birmingham A, Jepsen K, Farmer S, Tubb HM, Valles T, Tribelhorn CE, Tsai R, Aigner S, Sathe S, Moshiri N, Henson B, Mark AM, Hakim A, Baer NA, Barber T, Belda-Ferre P, Chacón M, Cheung W, Cresini ES, Eisner ER, Lastrella AL, Lawrence ES, Marotz CA, Ngo TT, Ostrander T, Plascencia A, Salido RA, Seaver P, Smoot EW, McDonald D, Neuhard RM, Scioscia AL, Satterlund AM, Simmons EH, Abelman DB, Brenner D, Bruner JC, Buckley A, Ellison M, Gattas J, Gonias SL, Hale M, Hawkins F, Ikeda L, Jhaveri H, Johnson T, Kellen V, Kremer B, Matthews G, McLawhon RW, Ouillet P, Park D, Pradenas A, Reed S, Riggs L, Sanders A, Sollenberger B, Song A, White B, Winbush T, Aceves CM, Anderson C, Gangavarapu K, Hufbauer E, Kurzban E, Lee J, Matteson NL, Parker E, Perkins SA, Ramesh KS, Robles-Sikisaka R, Schwab MA, Spencer E, Wohl S, Nicholson L, Mchardy IH, Dimmock DP, Hobbs CA, Bakhtar O, Harding A, Mendoza A, Bolze A, Becker D, Cirulli ET, Isaksson M, Barrett KMS, Washington NL, Malone JD, Schafer AM, Gurfield N, Stous S, Fielding-Miller R, Garfein RS, Gaines T, Anderson C, Martin NK, Schooley R, Austin B, MacCannell DR, Kingsmore SF, Lee W, Shah S, McDonald E… See abstract for full author list ➔ Karthikeyan S, et al. medRxiv [Preprint]. 2022 Apr 4:2021.12.21.21268143. doi: 10.1101/2021.12.21.21268143. medRxiv. 2022. Update in: Nature. 2022 Sep;609(7925):101-108. doi: 10.1038/s41586-022-05049-6. PMID: 35411350 Free PMC article. Updated. Preprint.
Synergies between centralized and federated approaches to data quality: a report from the national COVID cohort collaborative.
Pfaff ER, Girvin AT, Gabriel DL, Kostka K, Morris M, Palchuk MB, Lehmann HP, Amor B, Bissell M, Bradwell KR, Gold S, Hong SS, Loomba J, Manna A, McMurry JA, Niehaus E, Qureshi N, Walden A, Zhang XT, Zhu RL, Moffitt RA, Haendel MA, Chute CG; N3C Consortium; Adams WG, Al-Shukri S, Anzalone A, Baghal A, Bennett TD, Bernstam EV, Bernstam EV, Bissell MM, Bush B, Campion TR, Castro V, Chang J, Chaudhari DD, Chen W, Chu S, Cimino JJ, Crandall KA, Crooks M, Davies SJD, DiPalazzo J, Dorr D, Eckrich D, Eltinge SE, Fort DG, Golovko G, Gupta S, Haendel MA, Hajagos JG, Hanauer DA, Harnett BM, Horswell R, Huang N, Johnson SG, Kahn M, Khanipov K, Kieler C, Luzuriaga KR, Maidlow S, Martinez A, Mathew J, McClay JC, McMahan G, Melancon B, Meystre S, Miele L, Morizono H, Pablo R, Patel L, Phuong J, Popham DJ, Pulgarin C, Santos C, Sarkar IN, Sazo N, Setoguchi S, Soby S, Surampalli S, Suver C, Vangala UMR, Visweswaran S, Oehsen JV, Walters KM, Wiley L, Williams DA, Zai A. Pfaff ER, et al. J Am Med Inform Assoc. 2022 Mar 15;29(4):609-618. doi: 10.1093/jamia/ocab217. J Am Med Inform Assoc. 2022. PMID: 34590684 Free PMC article.
Impact of polygenic risk communication: an observational mobile application-based coronary artery disease study.
Muse ED, Chen SF, Liu S, Fernandez B, Schrader B, Molparia B, León AN, Lee R, Pubbi N, Mejia N, Ren C, El-Kalliny A, Prado Montes de Oca E, Aguilar H, Ghoshal A, Dias R, Evans D, Chen KY, Zhang Y, Wineinger NE, Spencer EG, Topol EJ, Torkamani A. Muse ED, et al. NPJ Digit Med. 2022 Mar 11;5(1):30. doi: 10.1038/s41746-022-00578-w. NPJ Digit Med. 2022. PMID: 35277577 Free PMC article.
Cannabidiol inhibits SARS-CoV-2 replication through induction of the host ER stress and innate immune responses.
Nguyen LC, Yang D, Nicolaescu V, Best TJ, Gula H, Saxena D, Gabbard JD, Chen SN, Ohtsuki T, Friesen JB, Drayman N, Mohamed A, Dann C, Silva D, Robinson-Mailman L, Valdespino A, Stock L, Suárez E, Jones KA, Azizi SA, Demarco JK, Severson WE, Anderson CD, Millis JM, Dickinson BC, Tay S, Oakes SA, Pauli GF, Palmer KE; National COVID Cohort Collaborative Consortium; Meltzer DO, Randall G, Rosner MR. Nguyen LC, et al. Sci Adv. 2022 Feb 25;8(8):eabi6110. doi: 10.1126/sciadv.abi6110. Epub 2022 Feb 23. Sci Adv. 2022. PMID: 35050692 Free PMC article.
Characteristics, Outcomes, and Severity Risk Factors Associated With SARS-CoV-2 Infection Among Children in the US National COVID Cohort Collaborative.
Martin B, DeWitt PE, Russell S, Anand A, Bradwell KR, Bremer C, Gabriel D, Girvin AT, Hajagos JG, McMurry JA, Neumann AJ, Pfaff ER, Walden A, Wooldridge JT, Yoo YJ, Saltz J, Gersing KR, Chute CG, Haendel MA, Moffitt R, Bennett TD. Martin B, et al. JAMA Netw Open. 2022 Feb 1;5(2):e2143151. doi: 10.1001/jamanetworkopen.2021.43151. JAMA Netw Open. 2022. PMID: 35133437 Free PMC article.
AI in health and medicine.
Rajpurkar P, Chen E, Banerjee O, Topol EJ. Rajpurkar P, et al. Nat Med. 2022 Jan;28(1):31-38. doi: 10.1038/s41591-021-01614-0. Epub 2022 Jan 20. Nat Med. 2022. PMID: 35058619 Review.
Social and built neighborhood environments and blood pressure 6 years later: Results from the Hispanic Community Health Study/Study of Latinos and the SOL CASAS ancillary study.
Savin KL, Roesch SC, Oren E, Carlson JA, Allison MA, Sotres-Alvarez D, Sallis JF, Jankowska MM, Talavera GA, Rodriguez TM, Chambers EC, Daviglus M, Perreira KM, Llabre MM, Gallo LC. Savin KL, et al. Soc Sci Med. 2022 Jan;292:114496. doi: 10.1016/j.socscimed.2021.114496. Epub 2021 Oct 19. Soc Sci Med. 2022. PMID: 34774366 Free PMC article.
COVID-19 vaccine breakthrough infections.
Gupta RK, Topol EJ. Gupta RK, et al. Science. 2021 Dec 24;374(6575):1561-1562. doi: 10.1126/science.abl8487. Epub 2021 Dec 23. Science. 2021. PMID: 34941414
Three year clinical outcomes in a nationwide, observational, siteless clinical trial of atrial fibrillation screening-mHealth Screening to Prevent Strokes (mSToPS).
Steinhubl SR, Waalen J, Sanyal A, Edwards AM, Ariniello LM, Ebner GS, Baca-Motes K, Zambon RA, Sarich T, Topol EJ. Steinhubl SR, et al. PLoS One. 2021 Oct 5;16(10):e0258276. doi: 10.1371/journal.pone.0258276. eCollection 2021. PLoS One. 2021. PMID: 34610049 Free PMC article. Clinical Trial.
Emergence of an early SARS-CoV-2 epidemic in the United States.
Zeller M, Gangavarapu K, Anderson C, Smither AR, Vanchiere JA, Rose R, Snyder DJ, Dudas G, Watts A, Matteson NL, Robles-Sikisaka R, Marshall M, Feehan AK, Sabino-Santos G Jr, Bell-Kareem AR, Hughes LD, Alkuzweny M, Snarski P, Garcia-Diaz J, Scott RS, Melnik LI, Klitting R, McGraw M, Belda-Ferre P, DeHoff P, Sathe S, Marotz C, Grubaugh ND, Nolan DJ, Drouin AC, Genemaras KJ, Chao K, Topol S, Spencer E, Nicholson L, Aigner S, Yeo GW, Farnaes L, Hobbs CA, Laurent LC, Knight R, Hodcroft EB, Khan K, Fusco DN, Cooper VS, Lemey P, Gardner L, Lamers SL, Kamil JP, Garry RF, Suchard MA, Andersen KG. Zeller M, et al. Cell. 2021 Sep 16;184(19):4939-4952.e15. doi: 10.1016/j.cell.2021.07.030. Epub 2021 Jul 27. Cell. 2021. PMID: 34508652 Free PMC article.
The origins of SARS-CoV-2: A critical review.
Holmes EC, Goldstein SA, Rasmussen AL, Robertson DL, Crits-Christoph A, Wertheim JO, Anthony SJ, Barclay WS, Boni MF, Doherty PC, Farrar J, Geoghegan JL, Jiang X, Leibowitz JL, Neil SJD, Skern T, Weiss SR, Worobey M, Andersen KG, Garry RF, Rambaut A. Holmes EC, et al. Cell. 2021 Sep 16;184(19):4848-4856. doi: 10.1016/j.cell.2021.08.017. Epub 2021 Aug 19. Cell. 2021. PMID: 34480864 Free PMC article. Review.
COVID-19 Disease Severity among People with HIV Infection or Solid Organ Transplant in the United States: A Nationally-representative, Multicenter, Observational Cohort Study.
Sun J, Patel RC, Zheng Q, Madhira V, Olex AL, Islam JY, French E, Chiang TP, Akselrod H, Moffitt R, Alexander GC, Andersen KM, Vinson AJ, Brown TT, Chute CG, Crandall KA, Franceschini N, Mannon RB, Kirk GD; National COVID Cohort Collaborative (N3C) Consortium. Sun J, et al. medRxiv [Preprint]. 2021 Jul 28:2021.07.26.21261028. doi: 10.1101/2021.07.26.21261028. medRxiv. 2021. PMID: 34341798 Free PMC article. Preprint.
Demonstrating an approach for evaluating synthetic geospatial and temporal epidemiologic data utility: Results from analyzing >1.8 million SARS-CoV-2 tests in the United States National COVID Cohort Collaborative (N3C).
Thomas JA, Foraker RE, Zamstein N, Payne PRO, Wilcox AB; N3C Consortium. Thomas JA, et al. medRxiv [Preprint]. 2021 Jul 8:2021.07.06.21259051. doi: 10.1101/2021.07.06.21259051. medRxiv. 2021. Update in: J Am Med Inform Assoc. 2022 Jul 12;29(8):1350-1365. doi: 10.1093/jamia/ocac045. PMID: 34268525 Free PMC article. Updated. Preprint.
Clinical Characterization and Prediction of Clinical Severity of SARS-CoV-2 Infection Among US Adults Using Data From the US National COVID Cohort Collaborative.
Bennett TD, Moffitt RA, Hajagos JG, Amor B, Anand A, Bissell MM, Bradwell KR, Bremer C, Byrd JB, Denham A, DeWitt PE, Gabriel D, Garibaldi BT, Girvin AT, Guinney J, Hill EL, Hong SS, Jimenez H, Kavuluru R, Kostka K, Lehmann HP, Levitt E, Mallipattu SK, Manna A, McMurry JA, Morris M, Muschelli J, Neumann AJ, Palchuk MB, Pfaff ER, Qian Z, Qureshi N, Russell S, Spratt H, Walden A, Williams AE, Wooldridge JT, Yoo YJ, Zhang XT, Zhu RL, Austin CP, Saltz JH, Gersing KR, Haendel MA, Chute CG; National COVID Cohort Collaborative (N3C) Consortium. Bennett TD, et al. JAMA Netw Open. 2021 Jul 1;4(7):e2116901. doi: 10.1001/jamanetworkopen.2021.16901. JAMA Netw Open. 2021. PMID: 34255046 Free PMC article.
Project Baby Bear: Rapid precision care incorporating rWGS in 5 California children's hospitals demonstrates improved clinical outcomes and reduced costs of care.
Dimmock D, Caylor S, Waldman B, Benson W, Ashburner C, Carmichael JL, Carroll J, Cham E, Chowdhury S, Cleary J, D'Harlingue A, Doshi A, Ellsworth K, Galarreta CI, Hobbs C, Houtchens K, Hunt J, Joe P, Joseph M, Kaplan RH, Kingsmore SF, Knight J, Kochhar A, Kronick RG, Limon J, Martin M, Rauen KA, Schwarz A, Shankar SP, Spicer R, Rojas MA, Vargas-Shiraishi O, Wigby K, Zadeh N, Farnaes L. Dimmock D, et al. Am J Hum Genet. 2021 Jul 1;108(7):1231-1238. doi: 10.1016/j.ajhg.2021.05.008. Epub 2021 Jun 4. Am J Hum Genet. 2021. PMID: 34089648 Free PMC article.
Rapid Sequencing-Based Diagnosis of Thiamine Metabolism Dysfunction Syndrome.
Owen MJ, Niemi AK, Dimmock DP, Speziale M, Nespeca M, Chau KK, Van Der Kraan L, Wright MS, Hansen C, Veeraraghavan N, Ding Y, Lenberg J, Chowdhury S, Hobbs CA, Batalov S, Zhu Z, Nahas SA, Gilmer S, Knight G, Lefebvre S, Reynders J, Defay T, Weir J, Thomson VS, Fraser L, Lajoie BR, McPhail TK, Mehtalia SS, Kunard CM, Hall KP, Kingsmore SF. Owen MJ, et al. N Engl J Med. 2021 Jun 3;384(22):2159-2161. doi: 10.1056/NEJMc2100365. N Engl J Med. 2021. PMID: 34077649 Free PMC article. No abstract available.
Emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States.
Washington NL, Gangavarapu K, Zeller M, Bolze A, Cirulli ET, Schiabor Barrett KM, Larsen BB, Anderson C, White S, Cassens T, Jacobs S, Levan G, Nguyen J, Ramirez JM 3rd, Rivera-Garcia C, Sandoval E, Wang X, Wong D, Spencer E, Robles-Sikisaka R, Kurzban E, Hughes LD, Deng X, Wang C, Servellita V, Valentine H, De Hoff P, Seaver P, Sathe S, Gietzen K, Sickler B, Antico J, Hoon K, Liu J, Harding A, Bakhtar O, Basler T, Austin B, MacCannell D, Isaksson M, Febbo PG, Becker D, Laurent M, McDonald E, Yeo GW, Knight R, Laurent LC, de Feo E, Worobey M, Chiu CY, Suchard MA, Lu JT, Lee W, Andersen KG. Washington NL, et al. Cell. 2021 May 13;184(10):2587-2594.e7. doi: 10.1016/j.cell.2021.03.052. Epub 2021 Mar 30. Cell. 2021. PMID: 33861950 Free PMC article.
Integration of genomic sequencing into the response to the Ebola virus outbreak in Nord Kivu, Democratic Republic of the Congo.
Kinganda-Lusamaki E, Black A, Mukadi DB, Hadfield J, Mbala-Kingebeni P, Pratt CB, Aziza A, Diagne MM, White B, Bisento N, Nsunda B, Akonga M, Faye M, Faye O, Edidi-Atani F, Matondo-Kuamfumu M, Mambu-Mbika F, Bulabula J, Di Paola N, Pauthner MG, Andersen KG, Palacios G, Delaporte E, Sall AA, Peeters M, Wiley MR, Ahuka-Mundeke S, Bedford T, Tamfum JM. Kinganda-Lusamaki E, et al. Nat Med. 2021 Apr;27(4):710-716. doi: 10.1038/s41591-021-01302-z. Epub 2021 Apr 12. Nat Med. 2021. PMID: 33846610 Free PMC article.
Emergence of an early SARS-CoV-2 epidemic in the United States.
Zeller M, Gangavarapu K, Anderson C, Smither AR, Vanchiere JA, Rose R, Snyder DJ, Dudas G, Watts A, Matteson NL, Robles-Sikisaka R, Marshall M, Feehan AK, Sabino-Santos G Jr, Bell-Kareem AR, Hughes LD, Alkuzweny M, Snarski P, Garcia-Diaz J, Scott RS, Melnik LI, Klitting R, McGraw M, Belda-Ferre P, DeHoff P, Sathe S, Marotz C, Grubaugh N, Nolan DJ, Drouin AC, Genemaras KJ, Chao K, Topol S, Spencer E, Nicholson L, Aigner S, Yeo GW, Farnaes L, Hobbs CA, Laurent LC, Knight R, Hodcroft EB, Khan K, Fusco DN, Cooper VS, Lemey P, Gardner L, Lamers SL, Kamil JP, Garry RF, Suchard MA, Andersen KG. Zeller M, et al. medRxiv [Preprint]. 2021 Feb 8:2021.02.05.21251235. doi: 10.1101/2021.02.05.21251235. medRxiv. 2021. Update in: Cell. 2021 Sep 16;184(19):4939-4952.e15. doi: 10.1016/j.cell.2021.07.030. PMID: 33564781 Free PMC article. Updated. Preprint.
Genomic epidemiology identifies emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States.
Washington NL, Gangavarapu K, Zeller M, Bolze A, Cirulli ET, Barrett KMS, Larsen BB, Anderson C, White S, Cassens T, Jacobs S, Levan G, Nguyen J, Ramirez JM 3rd, Rivera-Garcia C, Sandoval E, Wang X, Wong D, Spencer E, Robles-Sikisaka R, Kurzban E, Hughes LD, Deng X, Wang C, Servellita V, Valentine H, De Hoff P, Seaver P, Sathe S, Gietzen K, Sickler B, Antico J, Hoon K, Liu J, Harding A, Bakhtar O, Basler T, Austin B, Isaksson M, Febbo PG, Becker D, Laurent M, McDonald E, Yeo GW, Knight R, Laurent LC, de Feo E, Worobey M, Chiu C, Suchard MA, Lu JT, Lee W, Andersen KG. Washington NL, et al. medRxiv [Preprint]. 2021 Feb 7:2021.02.06.21251159. doi: 10.1101/2021.02.06.21251159. medRxiv. 2021. Update in: Cell. 2021 May 13;184(10):2587-2594.e7. doi: 10.1016/j.cell.2021.03.052. PMID: 33564780 Free PMC article. Updated. Preprint.
Associations of Sleep-disordered Breathing and Insomnia with Incident Hypertension and Diabetes. The Hispanic Community Health Study/Study of Latinos.
Li X, Sotres-Alvarez D, Gallo LC, Ramos AR, Aviles-Santa L, Perreira KM, Isasi CR, Zee PC, Savin KL, Schneiderman N, Wassertheil-Smoller S, Sofer T, Daviglus M, Redline S. Li X, et al. Am J Respir Crit Care Med. 2021 Feb 1;203(3):356-365. doi: 10.1164/rccm.201912-2330OC. Am J Respir Crit Care Med. 2021. PMID: 32758008 Free PMC article.
Medical assistant health coaching ("MAC") for type 2 diabetes in diverse primary care settings: A pragmatic, cluster-randomized controlled trial protocol.
Fortmann AL, Philis-Tsimikas A, Euyoque JA, Clark TL, Vital DG, Sandoval H, Bravin JI, Savin KL, Jones JA, Roesch S, Gilmer T, Bodenheimer T, Schultz J, Gallo LC. Fortmann AL, et al. Contemp Clin Trials. 2021 Jan;100:106164. doi: 10.1016/j.cct.2020.106164. Epub 2020 Oct 11. Contemp Clin Trials. 2021. PMID: 33053431 Free PMC article.
Accelerometer-assessed physical activity and incident diabetes in a population covering the adult life span: the Hispanic Community Health Study/Study of Latinos.
Chen GC, Qi Q, Hua S, Moon JY, Spartano NL, Vasan RS, Sotres-Alvarez D, Castaneda SF, Evenson KR, Perreira KM, Gallo LC, Pirzada A, Diaz KM, Daviglus ML, Gellman MD, Kaplan RC, Xue X, Mossavar-Rahmani Y. Chen GC, et al. Am J Clin Nutr. 2020 Nov 11;112(5):1318-1327. doi: 10.1093/ajcn/nqaa232. Am J Clin Nutr. 2020. PMID: 32910816 Free PMC article.
An RCT of Rapid Genomic Sequencing among Seriously Ill Infants Results in High Clinical Utility, Changes in Management, and Low Perceived Harm.
Dimmock DP, Clark MM, Gaughran M, Cakici JA, Caylor SA, Clarke C, Feddock M, Chowdhury S, Salz L, Cheung C, Bird LM, Hobbs C, Wigby K, Farnaes L, Bloss CS, Kingsmore SF; RCIGM Investigators. Dimmock DP, et al. Am J Hum Genet. 2020 Nov 5;107(5):942-952. doi: 10.1016/j.ajhg.2020.10.003. Am J Hum Genet. 2020. PMID: 33157007 Free PMC article. Clinical Trial.
Endotheliopathy and Platelet Dysfunction as Hallmarks of Fatal Lassa Fever.
Horton LE, Cross RW, Hartnett JN, Engel EJ, Sakabe S, Goba A, Momoh M, Sandi JD, Geisbert TW, Garry RF, Schieffelin JS, Grant DS, Sullivan BM. Horton LE, et al. Emerg Infect Dis. 2020 Nov;26(11):2625-2637. doi: 10.3201/eid2611.191694. Emerg Infect Dis. 2020. PMID: 33079033 Free PMC article.
Targeting family functioning, acculturative stress, and sugar-sweetened beverage consumption for obesity prevention: findings from the Hispanic community children's health study/study of Latino youth.
Figueroa R, Isasi CR, Perreira KM, McClain AC, Gallo LC, Sotres-Alvarez D, Delamater AM, Daviglus M, Van Horn L, Mattei J. Figueroa R, et al. BMC Public Health. 2020 Oct 14;20(1):1546. doi: 10.1186/s12889-020-09658-6. BMC Public Health. 2020. PMID: 33054741 Free PMC article.
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