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Year Number of Results
1927 1
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1934 1
1939 1
1948 1
1950 1
1953 1
1954 1
1955 2
1956 4
1957 6
1958 3
1959 6
1960 5
1961 6
1962 5
1963 4
1964 5
1965 8
1966 16
1967 23
1968 23
1969 19
1970 31
1971 22
1972 38
1973 34
1974 42
1975 127
1976 152
1977 146
1978 164
1979 238
1980 213
1981 245
1982 286
1983 400
1984 425
1985 485
1986 486
1987 559
1988 637
1989 802
1990 875
1991 1012
1992 1093
1993 1211
1994 1266
1995 1480
1996 1553
1997 1795
1998 1969
1999 2325
2000 3238
2001 4327
2002 5803
2003 7200
2004 9384
2005 10918
2006 12444
2007 13777
2008 14451
2009 15958
2010 16772
2011 17036
2012 17727
2013 17921
2014 17681
2015 17669
2016 17605
2017 17015
2018 17132
2019 18152
2020 19788
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2022 19952
2023 18607
2024 20375
2025 11808
2026 3

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Page 1
The microbiome of the infertile male.
Lundy SD, Vij SC, Rezk AH, Cohen JA, Bajic P, Ramasamy R. Lundy SD, et al. Curr Opin Urol. 2020 May;30(3):355-362. doi: 10.1097/MOU.0000000000000742. Curr Opin Urol. 2020. PMID: 32235279 Review.
The microbiome plays a role in both homeostatic symbiosis and also pathogenic dysbiosis in a wide array of diseases. Our understanding of the relationship between the microbiome and male factor infertility is in its infancy but is slowly evolving. ...SUMMARY: In this revie …
The microbiome plays a role in both homeostatic symbiosis and also pathogenic dysbiosis in a wide array of diseases. Our understandin …
Analysis of 16S rRNA Gene Amplicon Sequences Using the QIIME Software Package.
Lawley B, Tannock GW. Lawley B, et al. Methods Mol Biol. 2017;1537:153-163. doi: 10.1007/978-1-4939-6685-1_9. Methods Mol Biol. 2017. PMID: 27924593
While these advances have undoubtedly led to exciting new understanding of many systems, the array of protocols available and the idiosyncrasies of particular approaches can lead to confusion or, at worst, erroneous interpretation of results. Here, we describe a workflow f …
While these advances have undoubtedly led to exciting new understanding of many systems, the array of protocols available and the idi …
Bacteroides isolated from four mammalian hosts lack host-specific 16S rRNA gene phylogeny and carbon and nitrogen utilization patterns.
Atherly T, Ziemer CJ. Atherly T, et al. Microbiologyopen. 2014 Apr;3(2):225-38. doi: 10.1002/mbo3.159. Epub 2014 Feb 17. Microbiologyopen. 2014. PMID: 24532571 Free PMC article.
Analysis of 16S rRNA gene sequences revealed high sequence identity in these Bacteroides; with distinct phylogenetic groupings by bacterial species but not host origin. ...Only rep-PCR analysis demonstrated host-specific patterns, indicating that genomic changes due …
Analysis of 16S rRNA gene sequences revealed high sequence identity in these Bacteroides; with distinct phylogenetic groupings …
Suspension array analysis of 16S rRNA from Fe- and SO(4)2- reducing bacteria in uranium-contaminated sediments undergoing bioremediation.
Chandler DP, Jarrell AE, Roden ER, Golova J, Chernov B, Schipma MJ, Peacock AD, Long PE. Chandler DP, et al. Appl Environ Microbiol. 2006 Jul;72(7):4672-87. doi: 10.1128/AEM.02858-05. Appl Environ Microbiol. 2006. PMID: 16820459 Free PMC article.
A 16S rRNA-targeted tunable bead array was developed and used in a retrospective analysis of metal- and sulfate-reducing bacteria in contaminated subsurface sediments undergoing in situ U(VI) bioremediation. Total RNA was extracted from subsurface sediments a …
A 16S rRNA-targeted tunable bead array was developed and used in a retrospective analysis of metal- and sulfate-reducin …
Comparison of 16S rRNA gene phylogeny and functional tfdA gene distribution in thirty-one different 2,4-dichlorophenoxyacetic acid and 4-chloro-2-methylphenoxyacetic acid degraders.
Baelum J, Jacobsen CS, Holben WE. Baelum J, et al. Syst Appl Microbiol. 2010 Mar;33(2):67-70. doi: 10.1016/j.syapm.2010.01.001. Epub 2010 Mar 5. Syst Appl Microbiol. 2010. PMID: 20206455
Three novel primer sets were developed enabling amplification of full-length coding sequences (CDS) of the three known tfdA gene classes known to be involved in phenoxy acid degradation. 16S rRNA genes were also sequenced; and in order to investigate possible linkag …
Three novel primer sets were developed enabling amplification of full-length coding sequences (CDS) of the three known tfdA gene classes kno …
Exploring animal food microbiomes and resistomes via 16S rRNA gene amplicon sequencing and shotgun metagenomics.
Ge B, McDonald RC, Yang Q, Domesle KJ, Sarria S, Li X, Hsu C-H, Jarvis KG, Tadesse DA. Ge B, et al. Appl Environ Microbiol. 2025 Feb 19;91(2):e0223024. doi: 10.1128/aem.02230-24. Epub 2025 Jan 22. Appl Environ Microbiol. 2025. PMID: 39840975 Free PMC article.
Employing peptide nucleic acid blockers prior to 16S rRNA gene amplicon sequencing was comparable with post-sequencing in silico filtering at removing chloroplast and mitochondrial sequences. ...We unraveled the effects of DNA extraction kits on sample analysis by …
Employing peptide nucleic acid blockers prior to 16S rRNA gene amplicon sequencing was comparable with post-sequencing in sili …
Development of a 16S rRNA gene-based prototype microarray for the detection of selected actinomycetes genera.
Kyselková M, Kopecký J, Felföldi T, Cermák L, Omelka M, Grundmann GL, Moënne-Loccoz Y, Ságová-Marecková M. Kyselková M, et al. Antonie Van Leeuwenhoek. 2008 Oct;94(3):439-53. doi: 10.1007/s10482-008-9261-z. Epub 2008 Jul 4. Antonie Van Leeuwenhoek. 2008. PMID: 18600470
The incomplete coverage of actinomycetes by a genus-specific probe was caused by the limited number of 16S rRNA gene sequences in databases or insufficient 16S rRNA gene polymorphism. The microarray enabled discrimination between actinomycete communiti …
The incomplete coverage of actinomycetes by a genus-specific probe was caused by the limited number of 16S rRNA gene sequences …
Bioinformatic Approaches for Describing the Oral Microbiota.
Biswas K, Taylor MW, Broderick DTJ. Biswas K, et al. Methods Mol Biol. 2023;2588:105-130. doi: 10.1007/978-1-0716-2780-8_8. Methods Mol Biol. 2023. PMID: 36418685
Cultivation-independent (molecular) analysis of the oral microbiota can provide a comprehensive picture of microbial community composition, yet there is an at-times bewildering array of approaches that can be employed. This chapter introduces some of the key considerations …
Cultivation-independent (molecular) analysis of the oral microbiota can provide a comprehensive picture of microbial community composition, …
Prediction of high fecal propionate-to-butyrate ratios using 16S rRNA-based detection of bacterial groups with liquid array diagnostics.
Hiseni P, Snipen L, Wilson RC, Furu K, Hegge FT, Rudi K. Hiseni P, et al. Biotechniques. 2023 Jan;74(1):9-21. doi: 10.2144/btn-2022-0045. Epub 2023 Jan 5. Biotechniques. 2023. PMID: 36601888 Free article.
Here we aimed to estimate short-chain fatty acid information indirectly through a novel, simple quantitative PCR-compatible assay (liquid array diagnostics) targeting a limited number of microbiome 16S markers. Utilizing 15 liquid array diagnostics probes to target …
Here we aimed to estimate short-chain fatty acid information indirectly through a novel, simple quantitative PCR-compatible assay (liquid …
Choice of DNA extraction method affects detection of bacterial taxa from retail chicken breast.
Flint A, Laidlaw A, Li L, Raitt C, Rao M, Cooper A, Weedmark K, Carrillo C, Tamber S. Flint A, et al. BMC Microbiol. 2022 Sep 30;22(1):230. doi: 10.1186/s12866-022-02650-7. BMC Microbiol. 2022. PMID: 36180850 Free PMC article.
BACKGROUND: Sequence-based methods for the detection of bacteria such as 16S rRNA amplicon sequencing and metagenomics can provide a comprehensive view of the bacterial microbiome of food. ...Method performance was assessed by comparing ease of use, DNA yield, DNA q …
BACKGROUND: Sequence-based methods for the detection of bacteria such as 16S rRNA amplicon sequencing and metagenomics can pro …
363,488 results
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