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Year Number of Results
2003 3
2004 17
2005 25
2006 38
2007 41
2008 37
2009 45
2010 61
2011 60
2012 78
2013 66
2014 126
2015 133
2016 165
2017 219
2018 232
2019 265
2020 327
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2025 52

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2,845 results

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Page 1
Would you Rather Treat? A Rare Case of Mycobacterium Scrofulaceum.
Sheikh JZ, Lunjani N, Gul H, Kila L, Casserly B. Sheikh JZ, et al. Eur J Case Rep Intern Med. 2025 Jan 7;12(2):004963. doi: 10.12890/2025_004963. eCollection 2025. Eur J Case Rep Intern Med. 2025. PMID: 39926573 Free PMC article.
Understanding the therapeutic toolkit for inflammatory bowel disease.
Vieujean S, Jairath V, Peyrin-Biroulet L, Dubinsky M, Iacucci M, Magro F, Danese S. Vieujean S, et al. Nat Rev Gastroenterol Hepatol. 2025 Jan 31. doi: 10.1038/s41575-024-01035-7. Online ahead of print. Nat Rev Gastroenterol Hepatol. 2025. PMID: 39891014 Review.
Combination of white-light imaging-based and narrow-band imaging-based artificial intelligence models during colonoscopy in patients with ulcerative colitis.
Kuroki T, Maeda Y, Kudo SE, Ogata N, Takabayashi K, Takenaka K, Kawashima J, Kawabata Y, Iwasaki S, Shiina O, Morita Y, Kouyama Y, Sakurai T, Ogawa Y, Baba T, Mori Y, Iacucci M, Ogata H, Ohtsuka K, Misawa M. Kuroki T, et al. J Crohns Colitis. 2025 Jan 11;19(1):jjaf014. doi: 10.1093/ecco-jcc/jjaf014. J Crohns Colitis. 2025. PMID: 39888722
Cardiometabolic benefits of a non-industrialized-type diet are linked to gut microbiome modulation.
Li F, Armet AM, Korpela K, Liu J, Quevedo RM, Asnicar F, Seethaler B, Rusnak TBS, Cole JL, Zhang Z, Zhao S, Wang X, Gagnon A, Deehan EC, Mota JF, Bakal JA, Greiner R, Knights D, Segata N, Bischoff SC, Mereu L, Haqq AM, Field CJ, Li L, Prado CM, Walter J. Li F, et al. Cell. 2025 Jan 20:S0092-8674(24)01477-6. doi: 10.1016/j.cell.2024.12.034. Online ahead of print. Cell. 2025. PMID: 39855197 Free article.
Microbes Saving Lives and Reducing Suffering.
Timmis K, Karahan ZC, Ramos JL, Koren O, Pérez-Cobas AE, Steward K, de Lorenzo V, Caselli E, Douglas M, Schwab C, Rivero V, Giraldo R, Garmendia J, Turner RJ, Perlmutter J, Borrero de Acuña JM, Nikel PI, Bonnet J, Sessitsch A, Timmis JK, Pruzzo C, Prieto MA, Isazadeh S, Huang WE, Clarke G, Ercolini D, Häggblom M. Timmis K, et al. Microb Biotechnol. 2025 Jan;18(1):e70068. doi: 10.1111/1751-7915.70068. Microb Biotechnol. 2025. PMID: 39844583 Free PMC article. No abstract available.
Comparing Campylobacter jejuni to three other enteric pathogens in OligoMM12 mice reveals pathogen-specific host and microbiota responses.
Herzog MK, Peters A, Shayya N, Cazzaniga M, Kaka Bra K, Arora T, Barthel M, Gül E, Maurer L, Kiefer P, Christen P, Endhardt K, Vorholt JA, Frankel G, Heimesaat MM, Bereswill S, Gahan CGM, Claesson MJ, Domingo-Almenara X, Hardt WD. Herzog MK, et al. Gut Microbes. 2025 Dec;17(1):2447832. doi: 10.1080/19490976.2024.2447832. Epub 2025 Jan 21. Gut Microbes. 2025. PMID: 39835346 Free article.
Host-microbe multi-omics and succinotype profiling have prognostic value for future relapse in patients with inflammatory bowel disease.
O'Sullivan J, Patel S, Leventhal GE, Fitzgerald RS, Laserna-Mendieta EJ, Huseyin CE, Konstantinidou N, Rutherford E, Lavelle A, Dabbagh K, DeSantis TZ, Shanahan F, Temko A, Iwai S, Claesson MJ. O'Sullivan J, et al. Gut Microbes. 2025 Dec;17(1):2450207. doi: 10.1080/19490976.2025.2450207. Epub 2025 Jan 15. Gut Microbes. 2025. PMID: 39812341 Free PMC article.
A Menu for Microbes: Unraveling Appetite Regulation and Weight Dynamics Through the Microbiota-Brain Connection Across the Lifespan.
Ribeiro G, Schellekens H, Cuesta-Marti C, Maneschy I, Ismael S, Cuevas-Sierra A, Martínez JA, Silvestre MP, Marques C, Moreira-Rosário A, Faria A, Moreno LA, Calhau C. Ribeiro G, et al. Am J Physiol Gastrointest Liver Physiol. 2025 Jan 15. doi: 10.1152/ajpgi.00227.2024. Online ahead of print. Am J Physiol Gastrointest Liver Physiol. 2025. PMID: 39811913
Early life microbial succession in the gut follows common patterns in humans across the globe.
Fahur Bottino G, Bonham KS, Patel F, McCann S, Zieff M, Naspolini N, Ho D, Portlock T, Joos R, Midani FS, Schüroff P, Das A, Shennon I, Wilson BC, O'Sullivan JM, Britton RA, Murray DM, Kiely ME, Taddei CR, Beltrão-Braga PCB, Campos AC, Polanczyk GV, Huttenhower C, Donald KA, Klepac-Ceraj V. Fahur Bottino G, et al. Nat Commun. 2025 Jan 14;16(1):660. doi: 10.1038/s41467-025-56072-w. Nat Commun. 2025. PMID: 39809768 Free PMC article.
The mutational landscape of Staphylococcus aureus during colonisation.
Coll F, Blane B, Bellis KL, Matuszewska M, Wonfor T, Jamrozy D, Toleman MS, Geoghegan JA, Parkhill J, Massey RC, Peacock SJ, Harrison EM. Coll F, et al. Nat Commun. 2025 Jan 13;16(1):302. doi: 10.1038/s41467-024-55186-x. Nat Commun. 2025. PMID: 39805814 Free PMC article.
Coupling metabolomics and exome sequencing reveals graded effects of rare damaging heterozygous variants on gene function and human traits.
Scherer N, Fässler D, Borisov O, Cheng Y, Schlosser P, Wuttke M, Haug S, Li Y, Telkämper F, Patil S, Meiselbach H, Wong C, Berger U, Sekula P, Hoppmann A, Schultheiss UT, Mozaffari S, Xi Y, Graham R, Schmidts M, Köttgen M, Oefner PJ, Knauf F, Eckardt KU, Grünert SC, Estrada K, Thiele I, Hertel J, Köttgen A. Scherer N, et al. Nat Genet. 2025 Jan;57(1):193-205. doi: 10.1038/s41588-024-01965-7. Epub 2025 Jan 2. Nat Genet. 2025. PMID: 39747595 Free PMC article.
Bacillus safensis APC 4099 has broad-spectrum antimicrobial activity against both bacteria and fungi and produces several antimicrobial peptides, including the novel circular bacteriocin safencin E.
Kamilari E, O'Connor PM, Farias FMd, Johnson CN, Buttimer C, Deliephan A, Hill D, Fursenko O, Wiese J, Stanton C, Hill C, Ross RP. Kamilari E, et al. Appl Environ Microbiol. 2025 Jan 31;91(1):e0194224. doi: 10.1128/aem.01942-24. Epub 2024 Dec 31. Appl Environ Microbiol. 2025. PMID: 39745440 Free PMC article.
Artificial intelligence-enabled histology exhibits comparable accuracy to pathologists in assessing histological remission in ulcerative colitis: a systematic review, meta-analysis, and meta-regression.
Puga-Tejada M, Majumder S, Maeda Y, Zammarchi I, Ditonno I, Santacroce G, Capobianco I, Robles-Medranda C, Ghosh S, Iacucci M. Puga-Tejada M, et al. J Crohns Colitis. 2025 Jan 11;19(1):jjae198. doi: 10.1093/ecco-jcc/jjae198. J Crohns Colitis. 2025. PMID: 39742395 Free PMC article.
Microbiome testing in Europe: navigating analytical, ethical and regulatory challenges.
Rodriguez J, Cordaillat-Simmons M, Badalato N, Berger B, Breton H, de Lahondès R, Deschasaux-Tanguy M, Desvignes C, D'Humières C, Kampshoff S, Lavelle A, Metwaly A, Quijada NM, Seegers JFML, Udocor A, Zwart H; Human Microbiome Action Consortium; Maguin E, Doré J, Druart C. Rodriguez J, et al. Microbiome. 2024 Dec 18;12(1):258. doi: 10.1186/s40168-024-01991-x. Microbiome. 2024. PMID: 39695869 Free PMC article.
Author Correction: Examining the healthy human microbiome concept.
Joos R, Boucher K, Lavelle A, Arumugam M, Blaser MJ, Claesson MJ, Clarke G, Cotter PD, De Sordi L, Dominguez-Bello MG, Dutilh BE, Ehrlich SD, Ghosh TS, Hill C, Junot C, Lahti L, Lawley TD, Licht TR, Maguin E, Makhalanyane TP, Marchesi JR, Matthijnssens J, Raes J, Ravel J, Salonen A, Scanlan PD, Shkoporov A, Stanton C, Thiele I, Tolstoy I, Walter J, Yang B, Yutin N, Zhernakova A, Zwart H; Human Microbiome Action Consortium; Doré J, Ross RP. Joos R, et al. Nat Rev Microbiol. 2024 Dec 16. doi: 10.1038/s41579-024-01145-8. Online ahead of print. Nat Rev Microbiol. 2024. PMID: 39681696 No abstract available.
HIV, the gut microbiome and clinical outcomes, a systematic review.
Mac Cann R, Newman E, Devane D, Sabin C, Cotter AG, Landay A, O'Toole PW, Mallon PW. Mac Cann R, et al. PLoS One. 2024 Dec 9;19(12):e0308859. doi: 10.1371/journal.pone.0308859. eCollection 2024. PLoS One. 2024. PMID: 39652612 Free PMC article.
International consensus statement on microbiome testing in clinical practice.
Porcari S, Mullish BH, Asnicar F, Ng SC, Zhao L, Hansen R, O'Toole PW, Raes J, Hold G, Putignani L, Hvas CL, Zeller G, Koren O, Tun H, Valles-Colomer M, Collado MC, Fischer M, Allegretti J, Iqbal T, Chassaing B, Keller J, Baunwall SM, Abreu M, Barbara G, Zhang F, Ponziani FR, Costello SP, Paramsothy S, Kao D, Kelly C, Kupcinskas J, Youngster I, Franceschi F, Khanna S, Vehreschild M, Link A, De Maio F, Pasolli E, Miguez AB, Brigidi P, Posteraro B, Scaldaferri F, Stojanovic MR, Megraud F, Malfertheiner P, Masucci L, Arumugam M, Kaakoush N, Segal E, Bajaj J, Leong R, Cryan J, Weersma RK, Knight R, Guarner F, Shanahan F, Cani PD, Elinav E, Sanguinetti M, de Vos WM, El-Omar E, Dorè J, Marchesi J, Tilg H, Sokol H, Segata N, Cammarota G, Gasbarrini A, Ianiro G. Porcari S, et al. Lancet Gastroenterol Hepatol. 2025 Feb;10(2):154-167. doi: 10.1016/S2468-1253(24)00311-X. Epub 2024 Dec 5. Lancet Gastroenterol Hepatol. 2025. PMID: 39647502 Review.
The bidirectional interaction between antidepressants and the gut microbiota: are there implications for treatment response?
Borgiani G, Possidente C, Fabbri C, Oliva V, Bloemendaal M, Arias Vasquez A, Dinan TG, Vieta E, Menchetti M, De Ronchi D, Serretti A, Fanelli G. Borgiani G, et al. Int Clin Psychopharmacol. 2025 Jan 1;40(1):3-26. doi: 10.1097/YIC.0000000000000533. Epub 2024 Feb 6. Int Clin Psychopharmacol. 2025. PMID: 39621492 Free PMC article. Review.
Efficacy and safety of mirikizumab in patients with moderately-to-severely active Crohn's disease: a phase 3, multicentre, randomised, double-blind, placebo-controlled and active-controlled, treat-through study.
Ferrante M, D'Haens G, Jairath V, Danese S, Chen M, Ghosh S, Hisamatsu T, Kierkus J, Siegmund B, Bragg SM, Crandall W, Durand F, Hon E, Lin Z, Lopes MU, Morris N, Protic M, Carlier H, Sands BE; VIVID Study Group. Ferrante M, et al. Lancet. 2024 Dec 14;404(10470):2423-2436. doi: 10.1016/S0140-6736(24)01762-8. Epub 2024 Nov 21. Lancet. 2024. PMID: 39581202 Clinical Trial.
Targeting Cognitive Resilience through Prebiotics: A Focused Perspective.
Dalile B, Boyle NB, Ruiz FT, Chakrabarti A, Respondek F, Dodd GF, Kadosh KC, Hepsomali P, Brummer RJ, McArthur S, Dam V, Zanzer YC, Vermeiren Y, Schellekens H. Dalile B, et al. Adv Nutr. 2025 Jan;16(1):100343. doi: 10.1016/j.advnut.2024.100343. Epub 2024 Nov 16. Adv Nutr. 2025. PMID: 39551433 Free PMC article. Review.
Author Correction: Whole-body metabolic modelling reveals microbiome and genomic interactions on reduced urine formate levels in Alzheimer's disease.
Martinelli F, Heinken A, Henning AK, Ulmer MA, Hensen T, González A, Arnold M, Asthana S, Budde K, Engelman CD, Estaki M, Grabe HJ, Heston MB, Johnson S, Kastenmüller G, Martino C, McDonald D, Rey FE, Kilimann I, Peters O, Wang X, Spruth EJ, Schneider A, Fliessbach K, Wiltfang J, Hansen N, WenzelGlanz, Buerger K, Janowitz D, Laske C, Munk MH, Spottke A, Roy N, Nauck M, Teipel S, Knight R, Kaddurah-Daouk RF, Bendlin BB, Hertel J, Thiele I. Martinelli F, et al. Sci Rep. 2024 Nov 12;14(1):27692. doi: 10.1038/s41598-024-78228-2. Sci Rep. 2024. PMID: 39532987 Free PMC article. No abstract available.
Plasma proteomic signature of chronic psychosocial stress in mice.
O'Connor LA, Melo TG, Golubeva AV, Donoso F, Scaife C, English JA, Nolan YM, O'Leary OF. O'Connor LA, et al. Physiol Behav. 2025 Feb 1;289:114743. doi: 10.1016/j.physbeh.2024.114743. Epub 2024 Nov 10. Physiol Behav. 2025. PMID: 39532277
Healthy and Unhealthy Aging and the Human Microbiome.
Simbirtseva KY, O'Toole PW. Simbirtseva KY, et al. Annu Rev Med. 2025 Jan;76(1):115-127. doi: 10.1146/annurev-med-042423-042542. Epub 2025 Jan 16. Annu Rev Med. 2025. PMID: 39531852 Review.
Probiotics in Health Care: A Critical Appraisal.
Quigley EMM, Shanahan F. Quigley EMM, et al. Annu Rev Med. 2025 Jan;76(1):129-141. doi: 10.1146/annurev-med-042423-042315. Epub 2025 Jan 16. Annu Rev Med. 2025. PMID: 39527719 Review.
Gut microbiota regulates stress responsivity via the circadian system.
Tofani GSS, Leigh SJ, Gheorghe CE, Bastiaanssen TFS, Wilmes L, Sen P, Clarke G, Cryan JF. Tofani GSS, et al. Cell Metab. 2025 Jan 7;37(1):138-153.e5. doi: 10.1016/j.cmet.2024.10.003. Epub 2024 Nov 5. Cell Metab. 2025. PMID: 39504963 Free article.
The influence of lifestyle and environmental factors on host resilience through a homeostatic skin microbiota: An EAACI Task Force Report.
Kortekaas Krohn I, Callewaert C, Belasri H, De Pessemier B, Diez Lopez C, Mortz CG, O'Mahony L, Pérez-Gordo M, Sokolowska M, Unger Z, Untersmayr E, Homey B, Gomez-Casado C. Kortekaas Krohn I, et al. Allergy. 2024 Dec;79(12):3269-3284. doi: 10.1111/all.16378. Epub 2024 Nov 1. Allergy. 2024. PMID: 39485000 Free PMC article. Review.
Editorial: Microbiome and machine learning, volume II.
D'Elia D, Zomer A, Moreno Indias I, Bongcam-Rudloff E, Bertelsen RJ, Claesson MJ. D'Elia D, et al. Front Microbiol. 2024 Oct 15;15:1499260. doi: 10.3389/fmicb.2024.1499260. eCollection 2024. Front Microbiol. 2024. PMID: 39473845 Free PMC article. No abstract available.
EAACI guidelines on the management of IgE-mediated food allergy.
Santos AF, Riggioni C, Agache I, Akdis CA, Akdis M, Alvarez-Perea A, Alvaro-Lozano M, Ballmer-Weber B, Barni S, Beyer K, Bindslev-Jensen C, Brough HA, Buyuktiryaki B, Chu D, Del Giacco S, Dunn-Galvin A, Eberlein B, Ebisawa M, Eigenmann P, Eiwegger T, Feeney M, Fernandez-Rivas M, Fiocchi A, Fisher HR, Fleischer DM, Giovannini M, Gray C, Hoffmann-Sommergruber K, Halken S, O'B Hourihane J, Jones CJ, Jutel M, Knol EF, Konstantinou GN, Lack G, Lau S, Mejias AM, Marchisotto MJ, Meyer R, Mortz CG, Moya B, Muraro A, Nilsson C, de Oliveira LCL, O'Mahony L, Papadopoulos NG, Perrett KP, Peters R, Podesta M, Poulsen LK, Roberts G, Sampson H, Schwarze J, Smith P, Tham E, Untersmayr E, Van Ree R, Venter C, Vickery B, Vlieg-Boerstra B, Werfel T, Worm M, Du Toit G, Skypala I. Santos AF, et al. Allergy. 2025 Jan;80(1):14-36. doi: 10.1111/all.16345. Epub 2024 Oct 30. Allergy. 2025. PMID: 39473345 Free PMC article.
Policy Actions Required to Improve Nutrition for Brain Health.
Higgs S, Aarts K, Adan RAH, Buitelaar JK, Cirulli F, Cryan JF, Dickson SL, Korosi A, van der Beek EM, Dye L. Higgs S, et al. Nutr Rev. 2025 Mar 1;83(3):586-592. doi: 10.1093/nutrit/nuae160. Nutr Rev. 2025. PMID: 39471498 Review.
Endometriosis specific vaginal microbiota links to urine and serum N-glycome.
MacSharry J, Kovács Z, Xie Y, Adamczyk B, Walsh C, Reidy F, McAuliffe FM, Kilbane MT, Twomey PJ, Rudd PM, Wingfield M, Butler M, van Sinderen D, Glover L, Saldova R. MacSharry J, et al. Sci Rep. 2024 Oct 25;14(1):25372. doi: 10.1038/s41598-024-76125-2. Sci Rep. 2024. PMID: 39455640 Free PMC article.
Dietary pro-oxidant therapy by a vitamin K precursor targets PI 3-kinase VPS34 function.
Swamynathan MM, Kuang S, Watrud KE, Doherty MR, Gineste C, Mathew G, Gong GQ, Cox H, Cheng E, Reiss D, Kendall J, Ghosh D, Reczek CR, Zhao X, Herzka T, Špokaitė S, Dessus AN, Kim ST, Klingbeil O, Liu J, Nowak DG, Alsudani H, Wee TL, Park Y, Minicozzi F, Rivera K, Almeida AS, Chang K, Chakrabarty RP, Wilkinson JE, Gimotty PA, Diermeier SD, Egeblad M, Vakoc CR, Locasale JW, Chandel NS, Janowitz T, Hicks JB, Wigler M, Pappin DJ, Williams RL, Cifani P, Tuveson DA, Laporte J, Trotman LC. Swamynathan MM, et al. Science. 2024 Oct 25;386(6720):eadk9167. doi: 10.1126/science.adk9167. Epub 2024 Oct 25. Science. 2024. PMID: 39446948
Examining the healthy human microbiome concept.
Joos R, Boucher K, Lavelle A, Arumugam M, Blaser MJ, Claesson MJ, Clarke G, Cotter PD, De Sordi L, Dominguez-Bello MG, Dutilh BE, Ehrlich SD, Ghosh TS, Hill C, Junot C, Lahti L, Lawley TD, Licht TR, Maguin E, Makhalanyane TP, Marchesi JR, Matthijnssens J, Raes J, Ravel J, Salonen A, Scanlan PD, Shkoporov A, Stanton C, Thiele I, Tolstoy I, Walter J, Yang B, Yutin N, Zhernakova A, Zwart H; Human Microbiome Action Consortium; Doré J, Ross RP. Joos R, et al. Nat Rev Microbiol. 2024 Oct 23. doi: 10.1038/s41579-024-01107-0. Online ahead of print. Nat Rev Microbiol. 2024. PMID: 39443812 Review.
AI and endoscopy/histology in UC: the rise of machine.
Nardone OM, Maeda Y, Iacucci M. Nardone OM, et al. Therap Adv Gastroenterol. 2024 Oct 18;17:17562848241275294. doi: 10.1177/17562848241275294. eCollection 2024. Therap Adv Gastroenterol. 2024. PMID: 39435049 Free PMC article. Review.
Genomic and functional characterization of the Atlantic salmon gut microbiome in relation to nutrition and health.
Vera-Ponce de León A, Hensen T, Hoetzinger M, Gupta S, Weston B, Johnsen SM, Rasmussen JA, Clausen CG, Pless L, Veríssimo ARA, Rudi K, Snipen L, Karlsen CR, Limborg MT, Bertilsson S, Thiele I, Hvidsten TR, Sandve SR, Pope PB, La Rosa SL. Vera-Ponce de León A, et al. Nat Microbiol. 2024 Nov;9(11):3059-3074. doi: 10.1038/s41564-024-01830-7. Epub 2024 Oct 14. Nat Microbiol. 2024. PMID: 39402236
2,845 results