Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1948 1
1965 1
1995 1
1996 1
1998 1
1999 2
2000 4
2001 4
2002 2
2003 3
2004 4
2005 11
2006 6
2007 1
2008 8
2009 8
2010 7
2011 6
2012 7
2013 5
2014 4
2015 8
2016 7
2017 9
2018 5
2019 2
2020 5
2021 6
2022 6
2023 5
2024 2

Text availability

Article attribute

Article type

Publication date

Search Results

129 results

Results by year

Filters applied: . Clear all
Page 1
CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database.
Alcock BP, Huynh W, Chalil R, Smith KW, Raphenya AR, Wlodarski MA, Edalatmand A, Petkau A, Syed SA, Tsang KK, Baker SJC, Dave M, McCarthy MC, Mukiri KM, Nasir JA, Golbon B, Imtiaz H, Jiang X, Kaur K, Kwong M, Liang ZC, Niu KC, Shan P, Yang JYJ, Gray KL, Hoad GR, Jia B, Bhando T, Carfrae LA, Farha MA, French S, Gordzevich R, Rachwalski K, Tu MM, Bordeleau E, Dooley D, Griffiths E, Zubyk HL, Brown ED, Maguire F, Beiko RG, Hsiao WWL, Brinkman FSL, Van Domselaar G, McArthur AG. Alcock BP, et al. Among authors: brinkman fsl. Nucleic Acids Res. 2023 Jan 6;51(D1):D690-D699. doi: 10.1093/nar/gkac920. Nucleic Acids Res. 2023. PMID: 36263822 Free PMC article.
CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database.
Alcock BP, Raphenya AR, Lau TTY, Tsang KK, Bouchard M, Edalatmand A, Huynh W, Nguyen AV, Cheng AA, Liu S, Min SY, Miroshnichenko A, Tran HK, Werfalli RE, Nasir JA, Oloni M, Speicher DJ, Florescu A, Singh B, Faltyn M, Hernandez-Koutoucheva A, Sharma AN, Bordeleau E, Pawlowski AC, Zubyk HL, Dooley D, Griffiths E, Maguire F, Winsor GL, Beiko RG, Brinkman FSL, Hsiao WWL, Domselaar GV, McArthur AG. Alcock BP, et al. Among authors: brinkman fsl. Nucleic Acids Res. 2020 Jan 8;48(D1):D517-D525. doi: 10.1093/nar/gkz935. Nucleic Acids Res. 2020. PMID: 31665441 Free PMC article.
Microbial genomic island discovery, visualization and analysis.
Bertelli C, Tilley KE, Brinkman FSL. Bertelli C, et al. Among authors: brinkman fsl. Brief Bioinform. 2019 Sep 27;20(5):1685-1698. doi: 10.1093/bib/bby042. Brief Bioinform. 2019. PMID: 29868902 Free PMC article. Review.
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen.
Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV. Stover CK, et al. Among authors: brinkman fs. Nature. 2000 Aug 31;406(6799):959-64. doi: 10.1038/35023079. Nature. 2000. PMID: 10984043
Detecting genomic islands using bioinformatics approaches.
Langille MG, Hsiao WW, Brinkman FS. Langille MG, et al. Among authors: brinkman fs. Nat Rev Microbiol. 2010 May;8(5):373-82. doi: 10.1038/nrmicro2350. Nat Rev Microbiol. 2010. PMID: 20395967 Review.
Bacterial cyclic diguanylate signaling networks sense temperature.
Almblad H, Randall TE, Liu F, Leblanc K, Groves RA, Kittichotirat W, Winsor GL, Fournier N, Au E, Groizeleau J, Rich JD, Lou Y, Granton E, Jennings LK, Singletary LA, Winstone TML, Good NM, Bumgarner RE, Hynes MF, Singh M, Stietz MS, Brinkman FSL, Kumar A, Brassinga AKC, Parsek MR, Tseng BS, Lewis IA, Yipp BG, MacCallum JL, Harrison JJ. Almblad H, et al. Among authors: brinkman fsl. Nat Commun. 2021 Mar 31;12(1):1986. doi: 10.1038/s41467-021-22176-2. Nat Commun. 2021. PMID: 33790266 Free PMC article.
Improved genomic island predictions with IslandPath-DIMOB.
Bertelli C, Brinkman FSL. Bertelli C, et al. Among authors: brinkman fsl. Bioinformatics. 2018 Jul 1;34(13):2161-2167. doi: 10.1093/bioinformatics/bty095. Bioinformatics. 2018. PMID: 29905770 Free PMC article.
Computer-aided biotechnology: from immuno-informatics to reverse vaccinology.
Vivona S, Gardy JL, Ramachandran S, Brinkman FS, Raghava GP, Flower DR, Filippini F. Vivona S, et al. Among authors: brinkman fs. Trends Biotechnol. 2008 Apr;26(4):190-200. doi: 10.1016/j.tibtech.2007.12.006. Epub 2008 Feb 21. Trends Biotechnol. 2008. PMID: 18291542 Review.
From bugs to brains: The microbiome in neurological health.
McKay KA, Kowalec K, Brinkman F, Finlay BB, Horwitz M, Manges AR, Osborne L, Tremlett H. McKay KA, et al. Among authors: brinkman f. Mult Scler Relat Disord. 2017 Feb;12:1-3. doi: 10.1016/j.msard.2016.12.007. Epub 2016 Dec 18. Mult Scler Relat Disord. 2017. PMID: 28283098
129 results