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Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia.
Zhu X, Zhou B, Pattni R, Gleason K, Tan C, Kalinowski A, Sloan S, Fiston-Lavier AS, Mariani J, Petrov D, Barres BA, Duncan L, Abyzov A, Vogel H; Brain Somatic Mosaicism Network, Moran JV, Vaccarino FM, Tamminga CA, Levinson DF, Urban AE. Zhu X, et al. Among authors: fiston lavier as. Nat Neurosci. 2021 Feb;24(2):186-196. doi: 10.1038/s41593-020-00767-4. Epub 2021 Jan 11. Nat Neurosci. 2021. PMID: 33432196
T-lex3: an accurate tool to genotype and estimate population frequencies of transposable elements using the latest short-read whole genome sequencing data.
Bogaerts-Márquez M, Barrón MG, Fiston-Lavier AS, Vendrell-Mir P, Castanera R, Casacuberta JM, González J. Bogaerts-Márquez M, et al. Among authors: fiston lavier as. Bioinformatics. 2020 Feb 15;36(4):1191-1197. doi: 10.1093/bioinformatics/btz727. Bioinformatics. 2020. PMID: 31580402 Free PMC article.
Cyprinid herpesvirus 3 Evolves In Vitro through an Assemblage of Haplotypes that Alternatively Become Dominant or Under-Represented.
Klafack S, Fiston-Lavier AS, Bergmann SM, Hammoumi S, Schröder L, Fuchs W, Lusiastuti A, Lee PY, Heredia SV; Master student consortium, Gosselin-Grenet AS, Avarre JC. Klafack S, et al. Among authors: fiston lavier as. Viruses. 2019 Aug 15;11(8):754. doi: 10.3390/v11080754. Viruses. 2019. PMID: 31443175 Free PMC article.
Stress response, behavior, and development are shaped by transposable element-induced mutations in Drosophila.
Rech GE, Bogaerts-Márquez M, Barrón MG, Merenciano M, Villanueva-Cañas JL, Horváth V, Fiston-Lavier AS, Luyten I, Venkataram S, Quesneville H, Petrov DA, González J. Rech GE, et al. Among authors: fiston lavier as. PLoS Genet. 2019 Feb 12;15(2):e1007900. doi: 10.1371/journal.pgen.1007900. eCollection 2019 Feb. PLoS Genet. 2019. PMID: 30753202 Free PMC article.
The somatic piRNA pathway controls germline transposition over generations.
Barckmann B, El-Barouk M, Pélisson A, Mugat B, Li B, Franckhauser C, Fiston Lavier AS, Mirouze M, Fablet M, Chambeyron S. Barckmann B, et al. Among authors: fiston lavier as. Nucleic Acids Res. 2018 Oct 12;46(18):9524-9536. doi: 10.1093/nar/gky761. Nucleic Acids Res. 2018. PMID: 30312469 Free PMC article.
The ace-1 Locus Is Amplified in All Resistant Anopheles gambiae Mosquitoes: Fitness Consequences of Homogeneous and Heterogeneous Duplications.
Assogba BS, Milesi P, Djogbénou LS, Berthomieu A, Makoundou P, Baba-Moussa LS, Fiston-Lavier AS, Belkhir K, Labbé P, Weill M. Assogba BS, et al. Among authors: fiston lavier as. PLoS Biol. 2016 Dec 5;14(12):e2000618. doi: 10.1371/journal.pbio.2000618. eCollection 2016 Dec. PLoS Biol. 2016. PMID: 27918584 Free PMC article.
A call for benchmarking transposable element annotation methods.
Hoen DR, Hickey G, Bourque G, Casacuberta J, Cordaux R, Feschotte C, Fiston-Lavier AS, Hua-Van A, Hubley R, Kapusta A, Lerat E, Maumus F, Pollock DD, Quesneville H, Smit A, Wheeler TJ, Bureau TE, Blanchette M. Hoen DR, et al. Among authors: fiston lavier as. Mob DNA. 2015 Aug 4;6:13. doi: 10.1186/s13100-015-0044-6. eCollection 2015. Mob DNA. 2015. PMID: 26244060 Free PMC article.
Impact of transposable elements on insect genomes and biology.
Maumus F, Fiston-Lavier AS, Quesneville H. Maumus F, et al. Among authors: fiston lavier as. Curr Opin Insect Sci. 2015 Feb;7:30-36. doi: 10.1016/j.cois.2015.01.001. Epub 2015 Feb 3. Curr Opin Insect Sci. 2015. PMID: 32846669 Review. No abstract available.
Population genomics of transposable elements in Drosophila.
Barrón MG, Fiston-Lavier AS, Petrov DA, González J. Barrón MG, et al. Among authors: fiston lavier as. Annu Rev Genet. 2014;48:561-81. doi: 10.1146/annurev-genet-120213-092359. Epub 2014 Oct 1. Annu Rev Genet. 2014. PMID: 25292358 Review.
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