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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2005 1
2006 2
2007 8
2008 2
2009 4
2010 6
2011 7
2012 6
2013 8
2014 12
2015 15
2016 16
2017 10
2018 9
2019 6
2020 10
2021 4
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108 results
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Page 1
The genomic history of the Aegean palatial civilizations.
Clemente F, Unterländer M, Dolgova O, Amorim CEG, Coroado-Santos F, Neuenschwander S, Ganiatsou E, Cruz Dávalos DI, Anchieri L, Michaud F, Winkelbach L, Blöcher J, Arizmendi Cárdenas YO, Sousa da Mota B, Kalliga E, Souleles A, Kontopoulos I, Karamitrou-Mentessidi G, Philaniotou O, Sampson A, Theodorou D, Tsipopoulou M, Akamatis I, Halstead P, Kotsakis K, Urem-Kotsou D, Panagiotopoulos D, Ziota C, Triantaphyllou S, Delaneau O, Jensen JD, Moreno-Mayar JV, Burger J, Sousa VC, Lao O, Malaspinas AS, Papageorgopoulou C. Clemente F, et al. Among authors: jensen jd. Cell. 2021 Apr 28:S0092-8674(21)00370-6. doi: 10.1016/j.cell.2021.03.039. Online ahead of print. Cell. 2021. PMID: 33930288 Free article.
The population genomics of within-host Mycobacterium tuberculosis.
Morales-Arce AY, Sabin SJ, Stone AC, Jensen JD. Morales-Arce AY, et al. Among authors: jensen jd. Heredity (Edinb). 2021 Jan;126(1):1-9. doi: 10.1038/s41437-020-00377-7. Epub 2020 Oct 15. Heredity (Edinb). 2021. PMID: 33060846 Review.
Imposed mutational meltdown as an antiviral strategy.
Jensen JD, Stikeleather RA, Kowalik TF, Lynch M. Jensen JD, et al. Evolution. 2020 Dec;74(12):2549-2559. doi: 10.1111/evo.14107. Epub 2020 Oct 27. Evolution. 2020. PMID: 33047822 Free PMC article. Review.
Linking a mutation to survival in wild mice.
Barrett RDH, Laurent S, Mallarino R, Pfeifer SP, Xu CCY, Foll M, Wakamatsu K, Duke-Cohan JS, Jensen JD, Hoekstra HE. Barrett RDH, et al. Among authors: jensen jd. Science. 2019 Feb 1;363(6426):499-504. doi: 10.1126/science.aav3824. Epub 2019 Jan 31. Science. 2019. PMID: 30705186
Mutations in Influenza A Virus Neuraminidase and Hemagglutinin Confer Resistance against a Broadly Neutralizing Hemagglutinin Stem Antibody.
Prachanronarong KL, Canale AS, Liu P, Somasundaran M, Hou S, Poh YP, Han T, Zhu Q, Renzette N, Zeldovich KB, Kowalik TF, Kurt-Yilmaz N, Jensen JD, Bolon DNA, Marasco WA, Finberg RW, Schiffer CA, Wang JP. Prachanronarong KL, et al. Among authors: jensen jd. J Virol. 2019 Jan 4;93(2):e01639-18. doi: 10.1128/JVI.01639-18. Print 2019 Jan 15. J Virol. 2019. PMID: 30381484 Free PMC article.
The Demographic History of African Drosophila melanogaster.
Kapopoulou A, Pfeifer SP, Jensen JD, Laurent S. Kapopoulou A, et al. Among authors: jensen jd. Genome Biol Evol. 2018 Sep 1;10(9):2338-2342. doi: 10.1093/gbe/evy185. Genome Biol Evol. 2018. PMID: 30169784 Free PMC article.
The fitness landscape of the codon space across environments.
Fragata I, Matuszewski S, Schmitz MA, Bataillon T, Jensen JD, Bank C. Fragata I, et al. Among authors: jensen jd. Heredity (Edinb). 2018 Nov;121(5):422-437. doi: 10.1038/s41437-018-0125-7. Epub 2018 Aug 20. Heredity (Edinb). 2018. PMID: 30127529 Free PMC article.
Structural Determination of the Broadly Reactive Anti-IGHV1-69 Anti-idiotypic Antibody G6 and Its Idiotope.
Avnir Y, Prachanronarong KL, Zhang Z, Hou S, Peterson EC, Sui J, Zayed H, Kurella VB, McGuire AT, Stamatatos L, Hilbert BJ, Bohn MF, Kowalik TF, Jensen JD, Finberg RW, Wang JP, Goodall M, Jefferis R, Zhu Q, Kurt Yilmaz N, Schiffer CA, Marasco WA. Avnir Y, et al. Among authors: jensen jd. Cell Rep. 2017 Dec 12;21(11):3243-3255. doi: 10.1016/j.celrep.2017.11.056. Cell Rep. 2017. PMID: 29241550 Free PMC article.
CRISPR-Cas9-mediated saturated mutagenesis screen predicts clinical drug resistance with improved accuracy.
Ma L, Boucher JI, Paulsen J, Matuszewski S, Eide CA, Ou J, Eickelberg G, Press RD, Zhu LJ, Druker BJ, Branford S, Wolfe SA, Jensen JD, Schiffer CA, Green MR, Bolon DN. Ma L, et al. Among authors: jensen jd. Proc Natl Acad Sci U S A. 2017 Oct 31;114(44):11751-11756. doi: 10.1073/pnas.1708268114. Epub 2017 Oct 16. Proc Natl Acad Sci U S A. 2017. PMID: 29078326 Free PMC article.
Loci associated with skin pigmentation identified in African populations.
Crawford NG, Kelly DE, Hansen MEB, Beltrame MH, Fan S, Bowman SL, Jewett E, Ranciaro A, Thompson S, Lo Y, Pfeifer SP, Jensen JD, Campbell MC, Beggs W, Hormozdiari F, Mpoloka SW, Mokone GG, Nyambo T, Meskel DW, Belay G, Haut J; NISC Comparative Sequencing Program, Rothschild H, Zon L, Zhou Y, Kovacs MA, Xu M, Zhang T, Bishop K, Sinclair J, Rivas C, Elliot E, Choi J, Li SA, Hicks B, Burgess S, Abnet C, Watkins-Chow DE, Oceana E, Song YS, Eskin E, Brown KM, Marks MS, Loftus SK, Pavan WJ, Yeager M, Chanock S, Tishkoff SA. Crawford NG, et al. Among authors: jensen jd. Science. 2017 Nov 17;358(6365):eaan8433. doi: 10.1126/science.aan8433. Epub 2017 Oct 12. Science. 2017. PMID: 29025994 Free PMC article.
Antiviral drug resistance as an adaptive process.
Irwin KK, Renzette N, Kowalik TF, Jensen JD. Irwin KK, et al. Among authors: jensen jd. Virus Evol. 2016 Jun 10;2(1):vew014. doi: 10.1093/ve/vew014. eCollection 2016 Jan. Virus Evol. 2016. PMID: 28694997 Free PMC article. Review.
On the (un)predictability of a large intragenic fitness landscape.
Bank C, Matuszewski S, Hietpas RT, Jensen JD. Bank C, et al. Among authors: jensen jd. Proc Natl Acad Sci U S A. 2016 Dec 6;113(49):14085-14090. doi: 10.1073/pnas.1612676113. Epub 2016 Nov 18. Proc Natl Acad Sci U S A. 2016. PMID: 27864516 Free PMC article.
Inferring the age of a fixed beneficial allele.
Ormond L, Foll M, Ewing GB, Pfeifer SP, Jensen JD. Ormond L, et al. Among authors: jensen jd. Mol Ecol. 2016 Jan;25(1):157-69. doi: 10.1111/mec.13478. Epub 2015 Dec 24. Mol Ecol. 2016. PMID: 26576754
Limits and patterns of cytomegalovirus genomic diversity in humans.
Renzette N, Pokalyuk C, Gibson L, Bhattacharjee B, Schleiss MR, Hamprecht K, Yamamoto AY, Mussi-Pinhata MM, Britt WJ, Jensen JD, Kowalik TF. Renzette N, et al. Among authors: jensen jd. Proc Natl Acad Sci U S A. 2015 Jul 28;112(30):E4120-8. doi: 10.1073/pnas.1501880112. Epub 2015 Jul 6. Proc Natl Acad Sci U S A. 2015. PMID: 26150505 Free PMC article.
Positive Selection Drives Preferred Segment Combinations during Influenza Virus Reassortment.
Zeldovich KB, Liu P, Renzette N, Foll M, Pham ST, Venev SV, Gallagher GR, Bolon DN, Kurt-Jones EA, Jensen JD, Caffrey DR, Schiffer CA, Kowalik TF, Wang JP, Finberg RW. Zeldovich KB, et al. Among authors: jensen jd. Mol Biol Evol. 2015 Jun;32(6):1519-32. doi: 10.1093/molbev/msv044. Epub 2015 Feb 23. Mol Biol Evol. 2015. PMID: 25713211 Free PMC article.
Two ancient human genomes reveal Polynesian ancestry among the indigenous Botocudos of Brazil.
Malaspinas AS, Lao O, Schroeder H, Rasmussen M, Raghavan M, Moltke I, Campos PF, Sagredo FS, Rasmussen S, Gonçalves VF, Albrechtsen A, Allentoft ME, Johnson PL, Li M, Reis S, Bernardo DV, DeGiorgio M, Duggan AT, Bastos M, Wang Y, Stenderup J, Moreno-Mayar JV, Brunak S, Sicheritz-Ponten T, Hodges E, Hannon GJ, Orlando L, Price TD, Jensen JD, Nielsen R, Heinemeier J, Olsen J, Rodrigues-Carvalho C, Lahr MM, Neves WA, Kayser M, Higham T, Stoneking M, Pena SD, Willerslev E. Malaspinas AS, et al. Among authors: jensen jd. Curr Biol. 2014 Nov 3;24(21):R1035-7. doi: 10.1016/j.cub.2014.09.078. Epub 2014 Oct 23. Curr Biol. 2014. PMID: 25455029 Free PMC article.
A systematic survey of an intragenic epistatic landscape.
Bank C, Hietpas RT, Jensen JD, Bolon DN. Bank C, et al. Among authors: jensen jd. Mol Biol Evol. 2015 Jan;32(1):229-38. doi: 10.1093/molbev/msu301. Epub 2014 Nov 3. Mol Biol Evol. 2015. PMID: 25371431 Free PMC article.
Influenza virus drug resistance: a time-sampled population genetics perspective.
Foll M, Poh YP, Renzette N, Ferrer-Admetlla A, Bank C, Shim H, Malaspinas AS, Ewing G, Liu P, Wegmann D, Caffrey DR, Zeldovich KB, Bolon DN, Wang JP, Kowalik TF, Schiffer CA, Finberg RW, Jensen JD. Foll M, et al. Among authors: jensen jd. PLoS Genet. 2014 Feb 27;10(2):e1004185. doi: 10.1371/journal.pgen.1004185. eCollection 2014 Feb. PLoS Genet. 2014. PMID: 24586206 Free PMC article.
The impact of equilibrium assumptions on tests of selection.
Crisci JL, Poh YP, Mahajan S, Jensen JD. Crisci JL, et al. Among authors: jensen jd. Front Genet. 2013 Nov 11;4:235. doi: 10.3389/fgene.2013.00235. eCollection 2013. Front Genet. 2013. PMID: 24273554 Free PMC article.
Recurrent and recent selective sweeps in the piRNA pathway.
Simkin A, Wong A, Poh YP, Theurkauf WE, Jensen JD. Simkin A, et al. Among authors: jensen jd. Evolution. 2013 Apr;67(4):1081-90. doi: 10.1111/evo.12011. Epub 2013 Jan 17. Evolution. 2013. PMID: 23550757 Free PMC article.
Genomic variation and its impact on gene expression in Drosophila melanogaster.
Massouras A, Waszak SM, Albarca-Aguilera M, Hens K, Holcombe W, Ayroles JF, Dermitzakis ET, Stone EA, Jensen JD, Mackay TF, Deplancke B. Massouras A, et al. Among authors: jensen jd. PLoS Genet. 2012;8(11):e1003055. doi: 10.1371/journal.pgen.1003055. Epub 2012 Nov 15. PLoS Genet. 2012. PMID: 23189034 Free PMC article.
Human-specific histone methylation signatures at transcription start sites in prefrontal neurons.
Shulha HP, Crisci JL, Reshetov D, Tushir JS, Cheung I, Bharadwaj R, Chou HJ, Houston IB, Peter CJ, Mitchell AC, Yao WD, Myers RH, Chen JF, Preuss TM, Rogaev EI, Jensen JD, Weng Z, Akbarian S. Shulha HP, et al. Among authors: jensen jd. PLoS Biol. 2012;10(11):e1001427. doi: 10.1371/journal.pbio.1001427. Epub 2012 Nov 20. PLoS Biol. 2012. PMID: 23185133 Free PMC article.
On detecting selective sweeps using single genomes.
Sinha P, Dincer A, Virgil D, Xu G, Poh YP, Jensen JD. Sinha P, et al. Among authors: jensen jd. Front Genet. 2011 Dec 1;2:85. doi: 10.3389/fgene.2011.00085. eCollection 2011. Front Genet. 2011. PMID: 22303379 Free PMC article.
Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes.
Xu X, Liu X, Ge S, Jensen JD, Hu F, Li X, Dong Y, Gutenkunst RN, Fang L, Huang L, Li J, He W, Zhang G, Zheng X, Zhang F, Li Y, Yu C, Kristiansen K, Zhang X, Wang J, Wright M, McCouch S, Nielsen R, Wang J, Wang W. Xu X, et al. Among authors: jensen jd. Nat Biotechnol. 2011 Dec 11;30(1):105-11. doi: 10.1038/nbt.2050. Nat Biotechnol. 2011. PMID: 22158310
On characterizing adaptive events unique to modern humans.
Crisci JL, Wong A, Good JM, Jensen JD. Crisci JL, et al. Among authors: jensen jd. Genome Biol Evol. 2011;3:791-8. doi: 10.1093/gbe/evr075. Epub 2011 Jul 29. Genome Biol Evol. 2011. PMID: 21803765 Free PMC article.
Experimental illumination of a fitness landscape.
Hietpas RT, Jensen JD, Bolon DN. Hietpas RT, et al. Among authors: jensen jd. Proc Natl Acad Sci U S A. 2011 May 10;108(19):7896-901. doi: 10.1073/pnas.1016024108. Epub 2011 Apr 4. Proc Natl Acad Sci U S A. 2011. PMID: 21464309 Free PMC article.
Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection.
Albert FW, Hodges E, Jensen JD, Besnier F, Xuan Z, Rooks M, Bhattacharjee A, Brizuela L, Good JM, Green RE, Burbano HA, Plyusnina IZ, Trut L, Andersson L, Schöneberg T, Carlborg O, Hannon GJ, Pääbo S. Albert FW, et al. Among authors: jensen jd. Heredity (Edinb). 2011 Sep;107(3):205-14. doi: 10.1038/hdy.2011.4. Epub 2011 Feb 9. Heredity (Edinb). 2011. PMID: 21304545 Free PMC article.
To pool, or not to pool?
Cutler DJ, Jensen JD. Cutler DJ, et al. Among authors: jensen jd. Genetics. 2010 Sep;186(1):41-3. doi: 10.1534/genetics.110.121012. Genetics. 2010. PMID: 20855575 Free PMC article. No abstract available.
A draft sequence of the Neandertal genome.
Green RE, Krause J, Briggs AW, Maricic T, Stenzel U, Kircher M, Patterson N, Li H, Zhai W, Fritz MH, Hansen NF, Durand EY, Malaspinas AS, Jensen JD, Marques-Bonet T, Alkan C, Prüfer K, Meyer M, Burbano HA, Good JM, Schultz R, Aximu-Petri A, Butthof A, Höber B, Höffner B, Siegemund M, Weihmann A, Nusbaum C, Lander ES, Russ C, Novod N, Affourtit J, Egholm M, Verna C, Rudan P, Brajkovic D, Kucan Ž, Gušic I, Doronichev VB, Golovanova LV, Lalueza-Fox C, de la Rasilla M, Fortea J, Rosas A, Schmitz RW, Johnson PLF, Eichler EE, Falush D, Birney E, Mullikin JC, Slatkin M, Nielsen R, Kelso J, Lachmann M, Reich D, Pääbo S. Green RE, et al. Among authors: jensen jd. Science. 2010 May 7;328(5979):710-722. doi: 10.1126/science.1188021. Science. 2010. PMID: 20448178 Free PMC article.
Population genetic inference from genomic sequence variation.
Pool JE, Hellmann I, Jensen JD, Nielsen R. Pool JE, et al. Among authors: jensen jd. Genome Res. 2010 Mar;20(3):291-300. doi: 10.1101/gr.079509.108. Epub 2010 Jan 12. Genome Res. 2010. PMID: 20067940 Free PMC article. Review.
On the origin and spread of an adaptive allele in deer mice.
Linnen CR, Kingsley EP, Jensen JD, Hoekstra HE. Linnen CR, et al. Among authors: jensen jd. Science. 2009 Aug 28;325(5944):1095-8. doi: 10.1126/science.1175826. Science. 2009. PMID: 19713521 Free PMC article.
Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx).
Xia Q, Guo Y, Zhang Z, Li D, Xuan Z, Li Z, Dai F, Li Y, Cheng D, Li R, Cheng T, Jiang T, Becquet C, Xu X, Liu C, Zha X, Fan W, Lin Y, Shen Y, Jiang L, Jensen J, Hellmann I, Tang S, Zhao P, Xu H, Yu C, Zhang G, Li J, Cao J, Liu S, He N, Zhou Y, Liu H, Zhao J, Ye C, Du Z, Pan G, Zhao A, Shao H, Zeng W, Wu P, Li C, Pan M, Li J, Yin X, Li D, Wang J, Zheng H, Wang W, Zhang X, Li S, Yang H, Lu C, Nielsen R, Zhou Z, Wang J, Xiang Z, Wang J. Xia Q, et al. Among authors: jensen j. Science. 2009 Oct 16;326(5951):433-6. doi: 10.1126/science.1176620. Epub 2009 Aug 27. Science. 2009. PMID: 19713493 Free PMC article.
Inferring selection in partially sequenced regions.
Jensen JD, Thornton KR, Aquadro CF. Jensen JD, et al. Among authors: thornton kr. Mol Biol Evol. 2008 Feb;25(2):438-46. doi: 10.1093/molbev/msm273. Epub 2007 Dec 28. Mol Biol Evol. 2008. PMID: 18165259
Progress and prospects in mapping recent selection in the genome.
Thornton KR, Jensen JD, Becquet C, Andolfatto P. Thornton KR, et al. Among authors: jensen jd. Heredity (Edinb). 2007 Jun;98(6):340-8. doi: 10.1038/sj.hdy.6800967. Epub 2007 May 2. Heredity (Edinb). 2007. PMID: 17473869 Review.