(stanton, catherine[Author] OR o'toole, paul[Author] OR cotter, paul[Author] OR theile, ines[Author] OR arendt, elke[Author] OR o'sullivan, orla[Author] OR walter, jens[Author] OR dempsey, eugene[Author] OR mcauliffe, fionnula[Author] OR o'mahony, se - Search Results

Year	Number of Results
2004	2
2005	5
2006	3
2007	5
2008	5
2009	7
2010	9
2011	7
2012	12
2013	16
2014	26
2015	43
2016	46
2017	62
2018	71
2019	83
2020	112
2021	114
2022	111
2023	91
2024	108
2025	48

1

Late-onset sepsis treatment in very preterm infants alters longitudinal microbiome trajectory with lower abundance of Bifidobacterium despite probiotic supplementation.

Healy DB, Wang S, Patangia D, Grimaud G, Ross RP, Stanton C, Dempsey EM. Healy DB, et al. Among authors: stanton c, dempsey em. Gut Microbes. 2025 Dec;17(1):2523808. doi: 10.1080/19490976.2025.2523808. Epub 2025 Jul 6. Gut Microbes. 2025. PMID: 40618372 Free PMC article.

2

Intestinal pH: a major driver of human gut microbiota composition and metabolism.

Brinck JE, Sinha AK, Laursen MF, Dragsted LO, Raes J, Uribe RV, Walter J, Roager HM, Licht TR. Brinck JE, et al. Among authors: walter j. Nat Rev Gastroenterol Hepatol. 2025 Jul 2. doi: 10.1038/s41575-025-01092-6. Online ahead of print. Nat Rev Gastroenterol Hepatol. 2025. PMID: 40603778 Review.

3

Optimising White Wheat Bread Fortification with Vitamin D₃ and Dietary Fibre: Balancing Nutritional Enhancement and Technological Quality.

Boudrag S, Arendt EK, Segura Godoy C, Sahin AW, Nyhan L, Cashman KD, Zannini E. Boudrag S, et al. Among authors: arendt ek. Foods. 2025 Jun 11;14(12):2055. doi: 10.3390/foods14122055. Foods. 2025. PMID: 40565664 Free PMC article.

4

A genomics-based investigation of acetic acid bacteria across a global fermented food metagenomics dataset.

Zhang E, Breselge S, Carlino N, Segata N, Claesson MJ, Cotter PD. Zhang E, et al. Among authors: cotter pd. iScience. 2025 Mar 1;28(4):112139. doi: 10.1016/j.isci.2025.112139. eCollection 2025 Apr 18. iScience. 2025. PMID: 40463955 Free PMC article.

5

Gut and oral microbial profile associations to oral cancer.

Nayyar J, Bedu-Ferrari C, Patangia D, Hurley E, Feeley L, Ross RP, Stanton C, Brady P. Nayyar J, et al. Among authors: stanton c. J Dent. 2025 Sep;160:105848. doi: 10.1016/j.jdent.2025.105848. Epub 2025 May 31. J Dent. 2025. PMID: 40456384

6

A Review of Diet and Foraged Pollen Interactions with the Honeybee Gut Microbiome.

Meehan DE, O'Toole PW. Meehan DE, et al. Among authors: o toole pw. Microb Ecol. 2025 May 27;88(1):54. doi: 10.1007/s00248-025-02551-y. Microb Ecol. 2025. PMID: 40423805 Free PMC article. Review.

7

Exploring tarhana's prebiotic potential using different flours in an in vitro fermentation model.

Koc F, Sabuncu M, Yavuz GG, Düven G, Abdo RMK, Bağci U, Şahan Y, Özmen Toğay S, Ross RP, Stanton C. Koc F, et al. Among authors: stanton c. Food Funct. 2025 Jun 16;16(12):4754-4771. doi: 10.1039/d5fo00486a. Food Funct. 2025. PMID: 40422929

8

Gene-trait matching among Bifidobacterium dentium strains reveals various glycan metabolism loci including a strain-specific fucosyllactose utilization cluster.

Catalano Gonzaga O, McKenna S, O'Neill I, Cotter PD, McAuliffe FM, Coffey A, van Sinderen D, Bottacini F. Catalano Gonzaga O, et al. Among authors: cotter pd. Front Microbiol. 2025 May 12;16:1584694. doi: 10.3389/fmicb.2025.1584694. eCollection 2025. Front Microbiol. 2025. PMID: 40421466 Free PMC article.

9

Effects of feeding a simulated waste milk on growth, health, fecal microbiota, and antibiotic resistance in dairy heifer calves.

Flynn A, Barton W, McAloon C, McFadden M, Crispie F, McPherson SE, Allendez G, Murphy JP, McAloon CG, Cotter PD, Kennedy E. Flynn A, et al. Among authors: cotter pd. J Dairy Sci. 2025 May 16:S0022-0302(25)00359-5. doi: 10.3168/jds.2024-26062. Online ahead of print. J Dairy Sci. 2025. PMID: 40383390 Free article.

10

Effects of Prebiotics and a Synthetic Microbiome Consortium on the Composition and Metabolites of the Elderly Gut Microbiota In Vitro.

Ye H, Meehan D, Timmons S, O'Toole PW. Ye H, et al. Among authors: o toole pw. J Agric Food Chem. 2025 May 14;73(19):11720-11729. doi: 10.1021/acs.jafc.5c00364. Epub 2025 May 5. J Agric Food Chem. 2025. PMID: 40324006 Free PMC article.

11

Bacteroides maternus sp. nov., a novel species isolated from human faeces.

da Silva Morais E, Grimaud GM, Warda A, Stephens N, Ross RP, Stanton C. da Silva Morais E, et al. Among authors: stanton c. Sci Rep. 2025 Apr 21;15(1):13808. doi: 10.1038/s41598-025-96846-2. Sci Rep. 2025. PMID: 40258876 Free PMC article.

12

OPTIMATRIX v2.0: Optimised protocol to mitigate microbial blooms in the micro-Matrix bioreactor platform used as an ex vivo human distal colon model.

Mukherjee A, Leali NF, Salvetti E, Torriani S, Cotter PD, Mathur H. Mukherjee A, et al. Among authors: cotter pd. MethodsX. 2025 Mar 22;14:103275. doi: 10.1016/j.mex.2025.103275. eCollection 2025 Jun. MethodsX. 2025. PMID: 40224146 Free PMC article.

13

The effects of offering adequate-quality or high-quality colostrum on the passive immunity, health, growth, and fecal microbiome development of dairy heifer calves.

Flynn A, Leech J, McFadden M, McAloon C, Murphy JP, Crispie F, Cotter PD, McAloon C, Kennedy E. Flynn A, et al. Among authors: cotter pd. J Dairy Sci. 2025 Jun;108(6):6254-6272. doi: 10.3168/jds.2024-26165. Epub 2025 Apr 11. J Dairy Sci. 2025. PMID: 40221038 Free article.

14

Regional microbial content of fermented traditional and industrial East Mediterranean sausages from the islands of Cyprus and Mytilini.

Kamilari E, Stanton C, Tsaltas D, Ross RP. Kamilari E, et al. Among authors: stanton c. Microbiome Res Rep. 2024 Oct 28;4(1):3. doi: 10.20517/mrr.2024.47. eCollection 2025. Microbiome Res Rep. 2024. PMID: 40207283 Free PMC article.

15

Lactobacillus johnsonii CCFM1376 improves hypercholesterolemia in mice by regulating the composition of bile acids.

Chen K, Dang D, Li H, Ross RP, Stanton C, Chen W, Yang B. Chen K, et al. Among authors: stanton c. Microbiome Res Rep. 2024 Nov 9;4(1):6. doi: 10.20517/mrr.2024.38. eCollection 2025. Microbiome Res Rep. 2024. PMID: 40207276 Free PMC article.

16

A blueprint for contemporary studies of microbiomes.

Bindels LB, Watts JEM, Theis KR, Carrion VJ, Ossowicki A, Seifert J, Oh J, Shao Y, Hilty M, Kumar P, Hildebrand F, Lovejoy C, Wigley P, Yu K, Zhang M, Zhang T, Walter J, Desai MS, Huws SA, Schriml LM, Ravel J, Fricke WF, Eloe-Fadrosh EA, Lee CK, Clavel T. Bindels LB, et al. Among authors: walter j. Microbiome. 2025 Apr 8;13(1):95. doi: 10.1186/s40168-025-02091-0. Microbiome. 2025. PMID: 40200306 Free PMC article.

17

Cottage cheese, a relatively underexplored cultured dairy product with potential health benefits?

Farsi DN, Mathur H, Beresford T, Cotter PD. Farsi DN, et al. Among authors: cotter pd. Crit Rev Food Sci Nutr. 2025 Apr 6:1-11. doi: 10.1080/10408398.2025.2487682. Online ahead of print. Crit Rev Food Sci Nutr. 2025. PMID: 40188423 Free article. Review.

18

Vitamin biosynthesis in the gut: interplay between mammalian host and its resident microbiota.

Tarracchini C, Lordan C, Milani C, Moreira LPD, Alabedallat QM, de Moreno de LeBlanc A, Turroni F, Lugli GA, Mancabelli L, Longhi G, Brennan L, Mahony J, LeBlanc JG, Nilaweera KN, Cotter PD, van Sinderen D, Ventura M. Tarracchini C, et al. Among authors: cotter pd. Microbiol Mol Biol Rev. 2025 Jun 25;89(2):e0018423. doi: 10.1128/mmbr.00184-23. Epub 2025 Apr 2. Microbiol Mol Biol Rev. 2025. PMID: 40172109 Review.

19

Isolation of phages infecting the zoonotic pathogen Streptococcus suis reveals novel structural and genomic characteristics.

Osei EK, O'Hea R, Cambillau C, Athalye A, Hille F, Franz CMAP, O'Doherty Á, Wilson M, Murray GGR, Weinert LA, Manzanilla EG, Mahony J, Kenny JG. Osei EK, et al. Among authors: kenny jg. Microbiol Res. 2025 Jul;296:128147. doi: 10.1016/j.micres.2025.128147. Epub 2025 Mar 21. Microbiol Res. 2025. PMID: 40132484 Free article.

20

Strain-level variation among vaginal Lactobacillus crispatus and Lactobacillus iners as identified by comparative metagenomics.

Nori SRC, Walsh CJ, McAuliffe FM, Moore RL, Van Sinderen D, Feehily C, Cotter PD. Nori SRC, et al. Among authors: cotter pd. NPJ Biofilms Microbiomes. 2025 Mar 23;11(1):49. doi: 10.1038/s41522-025-00682-1. NPJ Biofilms Microbiomes. 2025. PMID: 40122890 Free PMC article.

21

aurora: a machine learning gwas tool for analyzing microbial habitat adaptation.

Bujdoš D, Walter J, O'Toole PW. Bujdoš D, et al. Among authors: o toole pw, walter j. Genome Biol. 2025 Mar 23;26(1):66. doi: 10.1186/s13059-025-03524-7. Genome Biol. 2025. PMID: 40122838 Free PMC article.

22

The core microbiomes and associated metabolic potential of water kefir as revealed by pan multi-omics.

Breselge S, Skibinska I, Yin X, Brennan L, Kilcawley K, Cotter PD. Breselge S, et al. Among authors: cotter pd. Commun Biol. 2025 Mar 11;8(1):415. doi: 10.1038/s42003-025-07808-3. Commun Biol. 2025. PMID: 40069560 Free PMC article.

23

A Randomized Crossover Fiber Intervention Study in Prader-Willi Syndrome: Insights into Metabolic and Microbiota Shifts.

Tan Q, Peng Y, Deehan EC, Vieira FT, Ho BWP, Afhami S, Wine E, Madsen KL, Field CJ, Pakseresht M, Ilkayeva O, Newgard CB, Walter J, Tun HM, Haqq AM. Tan Q, et al. Among authors: walter j. J Clin Endocrinol Metab. 2025 Mar 1:dgaf142. doi: 10.1210/clinem/dgaf142. Online ahead of print. J Clin Endocrinol Metab. 2025. PMID: 40036959

24

A Consensus Statement on establishing causality, therapeutic applications and the use of preclinical models in microbiome research.

Metwaly A, Kriaa A, Hassani Z, Carraturo F, Druart C; IHMCSA Consortium; Arnauts K, Wilmes P, Walter J, Rosshart S, Desai MS, Dore J, Fasano A, Blottiere HM, Maguin E, Haller D. Metwaly A, et al. Among authors: walter j. Nat Rev Gastroenterol Hepatol. 2025 May;22(5):343-356. doi: 10.1038/s41575-025-01041-3. Epub 2025 Mar 3. Nat Rev Gastroenterol Hepatol. 2025. PMID: 40033063 Review.

25

Toward a health-associated core keystone index for the human gut microbiome.

Goel A, Shete O, Goswami S, Samal A, C B L, Kedia S, Ahuja V, O'Toole PW, Shanahan F, Ghosh TS. Goel A, et al. Among authors: o toole pw. Cell Rep. 2025 Mar 25;44(3):115378. doi: 10.1016/j.celrep.2025.115378. Epub 2025 Mar 1. Cell Rep. 2025. PMID: 40023840 Free article.

26

Bactofencin A Displays a Delayed Killing Effect on a Clinical Strain of Staphylococcus aureus Which Is Greatly Accelerated in the Presence of Nisin.

O'Connor PM, Cotter PD, Hill C, Ross RP. O'Connor PM, et al. Among authors: cotter pd. Antibiotics (Basel). 2025 Feb 11;14(2):184. doi: 10.3390/antibiotics14020184. Antibiotics (Basel). 2025. PMID: 40001428 Free PMC article.

27

A secondary metabolite of Limosilactobacillusreuteri R2lc drives strain-specific pathology in a spontaneous mouse model of multiple sclerosis.

Archer D, Pérez-Muñoz ME, Tollenaar S, Veniamin S, Hotte N, Cheng CC, Nieves K, Oh JH, Morceli L, Muncner S, Barreda DR, Krishnamoorthy G, Power C, van Pijkeren JP, Walter J. Archer D, et al. Among authors: walter j. Cell Rep. 2025 Mar 25;44(3):115321. doi: 10.1016/j.celrep.2025.115321. Epub 2025 Feb 21. Cell Rep. 2025. PMID: 39985770 Free article.

28

Leuconostoc lactis strain APC 3969 produces a new variant of cyclic bacteriocin leucocyclicin Q and displays potent anti-Clostridium perfringens activity.

de Farias FM, Soria MC, O'Connor PM, Huang X, Buttimer C, Kamilari E, Deliephan A, Hill D, Fursenko O, Wiese J, Draper L, Stanton C, Hill C, Ross RP. de Farias FM, et al. Among authors: stanton c. Sci Rep. 2025 Feb 21;15(1):6372. doi: 10.1038/s41598-025-89450-x. Sci Rep. 2025. PMID: 39984510 Free PMC article.

29

In vitro digestibility of bioprocessed brewer's spent yeast: Demonstrating protein quality and gut microbiome modulation potential.

Jaeger A, Nyhan L, Sahin AW, Zannini E, Meehan D, Li J, O'Toole PW, Arendt EK. Jaeger A, et al. Among authors: o toole pw, arendt ek. Food Res Int. 2025 Feb;202:115732. doi: 10.1016/j.foodres.2025.115732. Epub 2025 Jan 11. Food Res Int. 2025. PMID: 39967179 Free article.

30

Temporal stability and lack of variance in microbiome composition and functionality in fit recreational athletes.

O' Donovan CM, Nori SRC, Shanahan F, Celentano G, Murphy TB, Cotter PD, Sullivan OO. O' Donovan CM, et al. Among authors: cotter pd. Sci Rep. 2025 Feb 15;15(1):5619. doi: 10.1038/s41598-025-88723-9. Sci Rep. 2025. PMID: 39955324 Free PMC article.

31

Bifidobacterium inhibits the progression of colorectal tumorigenesis in mice through fatty acid isomerization and gut microbiota modulation.

Chen Y, Fang H, Chen H, Liu X, Zhao J, Stanton C, Ross RP, Chen W, Yang B. Chen Y, et al. Among authors: stanton c. Gut Microbes. 2025 Dec;17(1):2464945. doi: 10.1080/19490976.2025.2464945. Epub 2025 Feb 9. Gut Microbes. 2025. PMID: 39924893 Free PMC article.

32

Streptococcus wuxiensis sp. nov., Streptococcus jiangnanensis sp. nov. and Streptococcus fermentans sp. nov.: three novel species of genus Streptococcus isolated from human breast milk.

Zhou Y, Zhao J, Ross P, Stanton C, Chen W, Yang B. Zhou Y, et al. Among authors: stanton c. Int J Syst Evol Microbiol. 2025 Feb;75(2). doi: 10.1099/ijsem.0.006674. Int J Syst Evol Microbiol. 2025. PMID: 39918554

33

Human milk oligosaccharides 2'-fucosyllactose and 3-fucosyllactose attenuate ovalbumin-induced food allergy through immunoregulation and gut microbiota modulation.

Wu S, Chen H, Yu R, Li H, Zhao J, Stanton C, Paul Ross R, Chen W, Yang B. Wu S, et al. Among authors: stanton c. Food Funct. 2025 Feb 17;16(4):1267-1283. doi: 10.1039/d4fo04638b. Food Funct. 2025. PMID: 39918321

34

Targeting the Gut-Heart Axis Improves Cardiac Remodeling in a Clinical Scale Model of Cardiometabolic Syndrome.

Herisson FM, Cluzel GL, Llopis-Grimalt MA, O'Donovan AN, Koc F, Karnik K, Laurie I, Canene-Adams K, Ross RP, Stanton C, Caplice NM. Herisson FM, et al. Among authors: stanton c. JACC Basic Transl Sci. 2024 Nov 20;10(1):1-15. doi: 10.1016/j.jacbts.2024.09.004. eCollection 2025 Jan. JACC Basic Transl Sci. 2024. PMID: 39906593 Free PMC article.

35

Rebuttal to Gut Microbiome in Children with Congenital Heart Disease After Cardiopulmonary Bypass Surgery (GuMiBear Study).

Stanton C, Koc F, Kelleher S, Ross P, Magnier C, McMahon CJ. Stanton C, et al. Pediatr Cardiol. 2025 Apr;46(4):1129-1130. doi: 10.1007/s00246-025-03795-8. Epub 2025 Feb 3. Pediatr Cardiol. 2025. PMID: 39900806 No abstract available.

36

Observational study protocol: the faecal microbiome in the acute stage of new-onset paediatric type 1 diabetes in an Irish cohort.

Kennedy EC, Ross FC, O'Shea CA, Lavelle A, Ross P, Dempsey E, Stanton C, Hawkes CP. Kennedy EC, et al. Among authors: dempsey e, stanton c. BMJ Open. 2025 Jan 30;15(1):e089206. doi: 10.1136/bmjopen-2024-089206. BMJ Open. 2025. PMID: 39890137 Free PMC article.

37

Cardiometabolic benefits of a non-industrialized-type diet are linked to gut microbiome modulation.

Li F, Armet AM, Korpela K, Liu J, Quevedo RM, Asnicar F, Seethaler B, Rusnak TBS, Cole JL, Zhang Z, Zhao S, Wang X, Gagnon A, Deehan EC, Mota JF, Bakal JA, Greiner R, Knights D, Segata N, Bischoff SC, Mereu L, Haqq AM, Field CJ, Li L, Prado CM, Walter J. Li F, et al. Among authors: walter j. Cell. 2025 Mar 6;188(5):1226-1247.e18. doi: 10.1016/j.cell.2024.12.034. Epub 2025 Jan 23. Cell. 2025. PMID: 39855197 Free article. Clinical Trial.

38

Associations Between the Gut Microbiome, Inflammation, and Cardiovascular Profiles in People With Human Immunodeficiency Virus.

MacCann R, Li J, Leon AAG, Negi R, Alalwan D, Tinago W, McGettrick P, Cotter AG, Landay A, Sabin C, O'Toole PW, Mallon PWG; Understanding the Pathology of Comorbid Disease in HIV-Infected Individuals (HIV UPBEAT) Study Group. MacCann R, et al. Among authors: o toole pw. J Infect Dis. 2025 Apr 15;231(4):e781-e791. doi: 10.1093/infdis/jiaf043. J Infect Dis. 2025. PMID: 39854172 Free PMC article.

39

Evaluating the efficiency of 16S-ITS-23S operon sequencing for species level resolution in microbial communities.

Srinivas M, Walsh CJ, Crispie F, O'Sullivan O, Cotter PD, van Sinderen D, Kenny JG. Srinivas M, et al. Among authors: kenny jg, o sullivan o, cotter pd. Sci Rep. 2025 Jan 22;15(1):2822. doi: 10.1038/s41598-024-83410-7. Sci Rep. 2025. PMID: 39843557 Free PMC article.

40

Isolation of phages infecting the zoonotic pathogen Streptococcus suis reveals novel structural and genomic characteristics.

Osei EK, O'Hea R, Cambillau C, Athalye A, Hille F, Franz CMAP, O'Doherty Á, Wilson M, Murray GGR, Weinert LA, Manzanilla EG, Mahony J, Kenny JG. Osei EK, et al. Among authors: kenny jg. bioRxiv [Preprint]. 2025 Jan 7:2025.01.07.631744. doi: 10.1101/2025.01.07.631744. bioRxiv. 2025. Update in: Microbiol Res. 2025 Jul;296:128147. doi: 10.1016/j.micres.2025.128147. PMID: 39829746 Free PMC article. Updated. Preprint.

41

Pediococcus acidilactici CECT 9879 (pA1c®) and heat inactivated pA1c® (pA1c® HI) ameliorate gestational diabetes mellitus in mice.

Yavorov-Dayliev D, Milagro FI, Ayo J, Oneca M, Goyache I, López-Yoldi M, FitzGerald JA, Crispie F, Cotter PD, Aranaz P. Yavorov-Dayliev D, et al. Among authors: cotter pd. Life Sci. 2025 Feb 1;362:123359. doi: 10.1016/j.lfs.2024.123359. Epub 2025 Jan 4. Life Sci. 2025. PMID: 39761739 Free article.

42

Cataloging metagenome-assembled genomes and microbial genes from the athlete gut microbiome.

Wosinska L, Walsh LH, Walsh CJ, Cotter PD, Guinane CM, O'Sullivan O. Wosinska L, et al. Among authors: o sullivan o, cotter pd. Microbiome Res Rep. 2024 Jul 22;3(4):41. doi: 10.20517/mrr.2023.69. eCollection 2024. Microbiome Res Rep. 2024. PMID: 39741946 Free PMC article.

43

The impact of exposure to green or bluespace on dietary intake and food choices among adults-A systematic literature review.

Gilbourne CA, Scarry A, Tierney AC, O'Connor EM. Gilbourne CA, et al. Among authors: o connor em. Food Sci Nutr. 2024 Nov 4;12(12):9913-9927. doi: 10.1002/fsn3.4447. eCollection 2024 Dec. Food Sci Nutr. 2024. PMID: 39723100 Free PMC article. Review.

44

Differential cortical aspartate uptake across the oestrous cycle is associated with changes in gut microbiota in Wistar-Kyoto rats.

Sajjad J, Morael J, Melo TG, Foley T, Murphy A, Keane J, Popov J, Stanton C, Dinan TG, Clarke G, Cryan JF, Collins JM, O'Mahony SM. Sajjad J, et al. Among authors: stanton c. Neurosci Lett. 2025 Jan 31;847:138096. doi: 10.1016/j.neulet.2024.138096. Epub 2024 Dec 21. Neurosci Lett. 2025. PMID: 39716584

45

Shotgun metagenomic sequencing reveals the influence of artisanal dairy environments on the microbiomes, quality, and safety of Idiazabal, a raw ewe milk PDO cheese.

Santamarina-García G, Yap M, Crispie F, Amores G, Lordan C, Virto M, Cotter PD. Santamarina-García G, et al. Among authors: cotter pd. Microbiome. 2024 Dec 20;12(1):262. doi: 10.1186/s40168-024-01980-0. Microbiome. 2024. PMID: 39707557 Free PMC article.

46

A gut-derived Streptococcus salivarius produces the novel nisin variant designated nisin G and inhibits Fusobacterium nucleatum in a model of the human distal colon microbiome.

Lawrence GW, Garcia-Gutierrez E, O'Mahony AK, Walsh CJ, O'Connor PM, Begley M, Guinane CM, Cotter PD. Lawrence GW, et al. Among authors: cotter pd. mBio. 2025 Feb 5;16(2):e0157324. doi: 10.1128/mbio.01573-24. Epub 2024 Dec 18. mBio. 2025. PMID: 39692472 Free PMC article.

47

Author Correction: Examining the healthy human microbiome concept.

Joos R, Boucher K, Lavelle A, Arumugam M, Blaser MJ, Claesson MJ, Clarke G, Cotter PD, De Sordi L, Dominguez-Bello MG, Dutilh BE, Ehrlich SD, Ghosh TS, Hill C, Junot C, Lahti L, Lawley TD, Licht TR, Maguin E, Makhalanyane TP, Marchesi JR, Matthijnssens J, Raes J, Ravel J, Salonen A, Scanlan PD, Shkoporov A, Stanton C, Thiele I, Tolstoy I, Walter J, Yang B, Yutin N, Zhernakova A, Zwart H; Human Microbiome Action Consortium; Doré J, Ross RP. Joos R, et al. Among authors: stanton c, cotter pd, walter j. Nat Rev Microbiol. 2025 Mar;23(3):206. doi: 10.1038/s41579-024-01145-8. Nat Rev Microbiol. 2025. PMID: 39681696 No abstract available.

48

Digging deep for nutrients and metabolites derived from high dietary protein intake and their potential functions in metabolic health.

Gilsenan S, Leong D, Cotter PD, Brennan L, Nilaweera KN. Gilsenan S, et al. Among authors: cotter pd. Nutr Res Rev. 2024 Dec 13:1-13. doi: 10.1017/S0954422424000374. Online ahead of print. Nutr Res Rev. 2024. PMID: 39668719 Review.

49

HIV, the gut microbiome and clinical outcomes, a systematic review.

Mac Cann R, Newman E, Devane D, Sabin C, Cotter AG, Landay A, O'Toole PW, Mallon PW. Mac Cann R, et al. Among authors: o toole pw. PLoS One. 2024 Dec 9;19(12):e0308859. doi: 10.1371/journal.pone.0308859. eCollection 2024. PLoS One. 2024. PMID: 39652612 Free PMC article.

50

International consensus statement on microbiome testing in clinical practice.

Porcari S, Mullish BH, Asnicar F, Ng SC, Zhao L, Hansen R, O'Toole PW, Raes J, Hold G, Putignani L, Hvas CL, Zeller G, Koren O, Tun H, Valles-Colomer M, Collado MC, Fischer M, Allegretti J, Iqbal T, Chassaing B, Keller J, Baunwall SM, Abreu M, Barbara G, Zhang F, Ponziani FR, Costello SP, Paramsothy S, Kao D, Kelly C, Kupcinskas J, Youngster I, Franceschi F, Khanna S, Vehreschild M, Link A, De Maio F, Pasolli E, Miguez AB, Brigidi P, Posteraro B, Scaldaferri F, Stojanovic MR, Megraud F, Malfertheiner P, Masucci L, Arumugam M, Kaakoush N, Segal E, Bajaj J, Leong R, Cryan J, Weersma RK, Knight R, Guarner F, Shanahan F, Cani PD, Elinav E, Sanguinetti M, de Vos WM, El-Omar E, Dorè J, Marchesi J, Tilg H, Sokol H, Segata N, Cammarota G, Gasbarrini A, Ianiro G. Porcari S, et al. Among authors: o toole pw. Lancet Gastroenterol Hepatol. 2025 Feb;10(2):154-167. doi: 10.1016/S2468-1253(24)00311-X. Epub 2024 Dec 5. Lancet Gastroenterol Hepatol. 2025. PMID: 39647502 Review.

51

Protein digestibility and techno-functional performance of milk-alternative prototypes based on combinations of lentil and cereal protein.

Boeck T, Nyhan L, Zannini E, Arendt EK. Boeck T, et al. Among authors: arendt ek. Food Funct. 2024 Dec 9;15(24):12228-12243. doi: 10.1039/d4fo04103h. Food Funct. 2024. PMID: 39604813

52

Impact of low FODMAP sourdough bread on gut microbiota using an in vitro colonic fermentation model.

Koc F, Arendt E, Coffey A, Ross RP, Stanton C. Koc F, et al. Among authors: arendt e, stanton c. Front Microbiol. 2024 Nov 11;15:1496022. doi: 10.3389/fmicb.2024.1496022. eCollection 2024. Front Microbiol. 2024. PMID: 39588097 Free PMC article.

53

Sex specific gut-microbiota signatures of resilient and comorbid gut-brain phenotypes induced by early life stress.

Wilmes L, Caputi V, Bastiaanssen TFS, Collins JM, Crispie F, Cotter PD, Dinan TG, Cryan JF, Clarke G, O'Mahony SM. Wilmes L, et al. Among authors: cotter pd. Neurobiol Stress. 2024 Nov 4;33:100686. doi: 10.1016/j.ynstr.2024.100686. eCollection 2024 Nov. Neurobiol Stress. 2024. PMID: 39583744 Free PMC article.

54

Donor human milk: the influence of processing technologies on its nutritional and microbial composition.

Conboy-Stephenson R, Ross RP, Kelly AL, Stanton C. Conboy-Stephenson R, et al. Among authors: stanton c. Front Nutr. 2024 Nov 1;11:1468886. doi: 10.3389/fnut.2024.1468886. eCollection 2024. Front Nutr. 2024. PMID: 39555198 Free PMC article. Review.

55

Healthy and Unhealthy Aging and the Human Microbiome.

Simbirtseva KY, O'Toole PW. Simbirtseva KY, et al. Among authors: o toole pw. Annu Rev Med. 2025 Jan;76(1):115-127. doi: 10.1146/annurev-med-042423-042542. Epub 2025 Jan 16. Annu Rev Med. 2025. PMID: 39531852 Free article. Review.

56

The Sex Dependent and Independent Effects of Dietary Whey Proteins Are Passed from the Mother to the Offspring.

Nilaweera KN, Nychyk O, McCarthy W, Moreira LPD, Alabedallat QM, Purfied D, Doyle J, Cormican P, Santos A, Yin X, Tobin J, Speakman JR, Berry D, Brennan L, Cotter PD. Nilaweera KN, et al. Among authors: cotter pd. Mol Nutr Food Res. 2024 Dec;68(23):e2400584. doi: 10.1002/mnfr.202400584. Epub 2024 Nov 3. Mol Nutr Food Res. 2024. PMID: 39491812 Free PMC article.

57

Fibre & fermented foods: differential effects on the microbiota-gut-brain axis.

Schneider E, Balasubramanian R, Ferri A, Cotter PD, Clarke G, Cryan JF. Schneider E, et al. Among authors: cotter pd. Proc Nutr Soc. 2024 Oct 25:1-16. doi: 10.1017/S0029665124004907. Online ahead of print. Proc Nutr Soc. 2024. PMID: 39449646 Review.

58

Bifidobacterium fermentum sp. nov. and Bifidobacterium aquikefiricola sp. nov., isolated from water kefir.

Breselge S, Bellassi P, Barcenilla C, Álvarez-Ordóñez A, Morelli L, Cotter PD. Breselge S, et al. Among authors: cotter pd. Int J Syst Evol Microbiol. 2024 Oct;74(10):006549. doi: 10.1099/ijsem.0.006549. Int J Syst Evol Microbiol. 2024. PMID: 39446649 Free PMC article.

59

Examining the healthy human microbiome concept.

Joos R, Boucher K, Lavelle A, Arumugam M, Blaser MJ, Claesson MJ, Clarke G, Cotter PD, De Sordi L, Dominguez-Bello MG, Dutilh BE, Ehrlich SD, Ghosh TS, Hill C, Junot C, Lahti L, Lawley TD, Licht TR, Maguin E, Makhalanyane TP, Marchesi JR, Matthijnssens J, Raes J, Ravel J, Salonen A, Scanlan PD, Shkoporov A, Stanton C, Thiele I, Tolstoy I, Walter J, Yang B, Yutin N, Zhernakova A, Zwart H; Human Microbiome Action Consortium; Doré J, Ross RP. Joos R, et al. Among authors: stanton c, cotter pd, walter j. Nat Rev Microbiol. 2025 Mar;23(3):192-205. doi: 10.1038/s41579-024-01107-0. Epub 2024 Oct 23. Nat Rev Microbiol. 2025. PMID: 39443812 Review.

60

Yeast β-glucan supplementation lowers insulin resistance without altering microbiota composition compared with placebo in subjects with type II diabetes: a phase I exploratory study.

Cronin P, Hurley C, Ryan A, Zamora-Úbeda M, Govindan A, Stanton C, Lane GP, Joyce SA, O'Toole PW, O'Connor EM. Cronin P, et al. Among authors: stanton c, o toole pw, o connor em. Br J Nutr. 2024 Oct 23;132(9):1-12. doi: 10.1017/S0007114524002526. Online ahead of print. Br J Nutr. 2024. PMID: 39439317 Free PMC article.

61

Manipulating a host-native microbial strain compensates for low microbial diversity by increasing weight gain in a wild bird population.

Somers SE, Davidson GL, Mbandlwa P, McKeon CM, Stanton C, Ross RP, Quinn JL. Somers SE, et al. Among authors: stanton c, quinn jl. Proc Natl Acad Sci U S A. 2024 Oct 22;121(43):e2402352121. doi: 10.1073/pnas.2402352121. Epub 2024 Oct 14. Proc Natl Acad Sci U S A. 2024. PMID: 39401350 Free PMC article.

62

High-quality draft genome of Lactiplantibacillus plantarum strain APC2688 isolated from human feces.

Valderrama B, Daly I, Gunnigle E, Rea MC, Kenny J, Coakley M, Cryan JF, Clarke G, Nagpal J. Valderrama B, et al. Among authors: kenny j. Microbiol Resour Announc. 2024 Nov 12;13(11):e0064124. doi: 10.1128/mra.00641-24. Epub 2024 Oct 14. Microbiol Resour Announc. 2024. PMID: 39400147 Free PMC article.

63

The gut microbiome and dietary fibres: implications in obesity, cardiometabolic diseases and cancer.

Delzenne NM, Bindels LB, Neyrinck AM, Walter J. Delzenne NM, et al. Among authors: walter j. Nat Rev Microbiol. 2025 Apr;23(4):225-238. doi: 10.1038/s41579-024-01108-z. Epub 2024 Oct 10. Nat Rev Microbiol. 2025. PMID: 39390291 Review.

64

Dietary amino acids, macronutrients, vaginal birth, and breastfeeding are associated with the vaginal microbiome in early pregnancy.

Corbett GA, Moore R, Feehily C, Killeen SL, O'Brien E, Van Sinderen D, Matthews E, O'Flaherty R, Rudd PM, Saldova R, Walsh CJ, Lawton EM, MacIntyre DA, Corcoran S, Cotter PD, McAuliffe FM. Corbett GA, et al. Among authors: cotter pd. Microbiol Spectr. 2024 Nov 5;12(11):e0113024. doi: 10.1128/spectrum.01130-24. Epub 2024 Oct 4. Microbiol Spectr. 2024. PMID: 39365058 Free PMC article.

65

Genome sequence of the New Zealand raw milk isolate and candidate probiotic strain Lactococcus lactis FNZ339.

de Almeida EL, O'Toole PW, Bassett SA. de Almeida EL, et al. Among authors: o toole pw. Microbiol Resour Announc. 2024 Nov 12;13(11):e0064824. doi: 10.1128/mra.00648-24. Epub 2024 Sep 30. Microbiol Resour Announc. 2024. PMID: 39345185 Free PMC article.

66

Genome sequence of the New Zealand cheese isolate and candidate probiotic strain Lactiplantibacillus plantarum FNZ042.

de Almeida EL, O'Toole PW, Bassett SA. de Almeida EL, et al. Among authors: o toole pw. Microbiol Resour Announc. 2024 Nov 12;13(11):e0064724. doi: 10.1128/mra.00647-24. Epub 2024 Sep 30. Microbiol Resour Announc. 2024. PMID: 39345104 Free PMC article.

67

Exploring the Impact of Solid-State Fermentation on Fava Bean Flour: A Comparative Study of Aspergillus oryzae and Rhizopus oligosporus.

Gautheron O, Nyhan L, Torreiro MG, Tlais AZA, Cappello C, Gobbetti M, Hammer AK, Zannini E, Arendt EK, Sahin AW. Gautheron O, et al. Among authors: arendt ek. Foods. 2024 Sep 15;13(18):2922. doi: 10.3390/foods13182922. Foods. 2024. PMID: 39335851 Free PMC article.

68

Selective human milk oligosaccharide utilization by members of the Bifidobacterium pseudocatenulatum taxon.

Sanchez-Gallardo R, Bottacini F, O'Neill IJ, Esteban-Torres M, Moore R, McAuliffe FM, Cotter PD, van Sinderen D. Sanchez-Gallardo R, et al. Among authors: cotter pd. Appl Environ Microbiol. 2024 Oct 23;90(10):e0064824. doi: 10.1128/aem.00648-24. Epub 2024 Sep 24. Appl Environ Microbiol. 2024. PMID: 39315793 Free PMC article.

69

Editorial: Bacteriocins and other ribosomally synthesised and post-translationally modified peptides (RiPPs) as modulators of the microbiome.

Mathur H, Field D, Guinane C, Begley M, Upton M, Mantovani HC, Cotter PD. Mathur H, et al. Among authors: cotter pd. Front Microbiol. 2024 Aug 23;15:1463909. doi: 10.3389/fmicb.2024.1463909. eCollection 2024. Front Microbiol. 2024. PMID: 39247691 Free PMC article. No abstract available.

70

Highly accurate and sensitive absolute quantification of bacterial strains in human fecal samples.

Li F, Liu J, Maldonado-Gómez MX, Frese SA, Gänzle MG, Walter J. Li F, et al. Among authors: walter j. Microbiome. 2024 Sep 7;12(1):168. doi: 10.1186/s40168-024-01881-2. Microbiome. 2024. PMID: 39244633 Free PMC article.

71

Cross-Cohort Gut Microbiome Signatures of Irritable Bowel Syndrome Presentation and Treatment.

Li J, Ghosh TS, Arendt E, Shanahan F, O'Toole PW. Li J, et al. Among authors: arendt e, o toole pw. Adv Sci (Weinh). 2024 Nov;11(41):e2308313. doi: 10.1002/advs.202308313. Epub 2024 Sep 7. Adv Sci (Weinh). 2024. PMID: 39243395 Free PMC article.

72

Concepts and criteria defining emerging microbiome applications.

Kostic T, Schloter M, Arruda P, Berg G, Charles TC, Cotter PD, Kiran GS, Lange L, Maguin E, Meisner A, van Overbeek L, Sanz Y, Sarand I, Selvin J, Tsakalidou E, Smidt H, Wagner M, Sessitsch A. Kostic T, et al. Among authors: cotter pd. Microb Biotechnol. 2024 Sep;17(9):e14550. doi: 10.1111/1751-7915.14550. Microb Biotechnol. 2024. PMID: 39236296 Free PMC article.

73

Disease-associated microbiome signature species in the gut.

Li J, O'Toole PW. Li J, et al. Among authors: o toole pw. PNAS Nexus. 2024 Aug 21;3(9):pgae352. doi: 10.1093/pnasnexus/pgae352. eCollection 2024 Sep. PNAS Nexus. 2024. PMID: 39228810 Free PMC article.

74

Unexplored microbial diversity from 2,500 food metagenomes and links with the human microbiome.

Carlino N, Blanco-Míguez A, Punčochář M, Mengoni C, Pinto F, Tatti A, Manghi P, Armanini F, Avagliano M, Barcenilla C, Breselge S, Cabrera-Rubio R, Calvete-Torre I, Coakley M, Cobo-Díaz JF, De Filippis F, Dey H, Leech J, Klaassens ES, Knobloch S, O'Neil D, Quijada NM, Sabater C, Skírnisdóttir S, Valentino V, Walsh L; MASTER EU Consortium; Alvarez-Ordóñez A, Asnicar F, Fackelmann G, Heidrich V, Margolles A, Marteinsson VT, Rota Stabelli O, Wagner M, Ercolini D, Cotter PD, Segata N, Pasolli E. Carlino N, et al. Among authors: cotter pd. Cell. 2024 Oct 3;187(20):5775-5795.e15. doi: 10.1016/j.cell.2024.07.039. Epub 2024 Aug 29. Cell. 2024. PMID: 39214080 Free article.

75

Somatic cell count as an indicator of subclinical mastitis and increased inflammatory response in asymptomatic lactating women.

Angelopoulou A, Harris HMB, Warda AK, O'Shea C-A, Lavelle A, Ryan CA, Dempsey E, Stanton C, Hill C, Ross RP. Angelopoulou A, et al. Among authors: dempsey e, stanton c. Microbiol Spectr. 2024 Oct 3;12(10):e0405123. doi: 10.1128/spectrum.04051-23. Epub 2024 Aug 27. Microbiol Spectr. 2024. PMID: 39189754 Free PMC article.

76

Raffinocyclicin is a novel plasmid-encoded circular bacteriocin produced by Lactococcus raffinolactis with broad-spectrum activity against many gram-positive food pathogens.

Miceli de Farias F, O'Connor PM, Buttimer C, Kamilari E, Soria MC, Johnson CN, Deliephan A, Hill D, Fursenko O, Wiese J, Draper LA, Stanton C, Hill C, Ross RP. Miceli de Farias F, et al. Among authors: stanton c. Appl Environ Microbiol. 2024 Sep 18;90(9):e0080924. doi: 10.1128/aem.00809-24. Epub 2024 Aug 27. Appl Environ Microbiol. 2024. PMID: 39189737 Free PMC article.

77

Lactobacillus plantarum Ameliorates Colorectal Cancer by Ameliorating the Intestinal Barrier through the CLA-PPAR-γ Axis.

Chen Y, Ma W, Zhao J, Stanton C, Ross RP, Zhang H, Chen W, Yang B. Chen Y, et al. Among authors: stanton c. J Agric Food Chem. 2024 Sep 11;72(36):19766-19785. doi: 10.1021/acs.jafc.4c02824. Epub 2024 Aug 26. J Agric Food Chem. 2024. PMID: 39186442

78

Gut Microbiome in Children with Congenital Heart Disease After Cardiopulmonary Bypass Surgery (GuMiBear Study).

Koc F, Magner C, Murphy K, Kelleher ST, Tan MH, O'Toole M, Jenkins D, Boyle J, Lavelle M, Maguire N, Ross PR, Stanton C, McMahon CJ. Koc F, et al. Among authors: stanton c. Pediatr Cardiol. 2024 Aug 22. doi: 10.1007/s00246-024-03634-2. Online ahead of print. Pediatr Cardiol. 2024. PMID: 39174731

79

Novel Dairy Fermentates Have Differential Effects on Key Immune Responses Associated with Viral Immunity and Inflammation in Dendritic Cells.

Finnegan D, Connolly C, Mechoud MA, FitzGerald JA, Beresford T, Mathur H, Brennan L, Cotter PD, Loscher CE. Finnegan D, et al. Among authors: cotter pd. Foods. 2024 Jul 29;13(15):2392. doi: 10.3390/foods13152392. Foods. 2024. PMID: 39123583 Free PMC article.

80

Ketogenic diet but not free-sugar restriction alters glucose tolerance, lipid metabolism, peripheral tissue phenotype, and gut microbiome: RCT.

Hengist A, Davies RG, Walhin JP, Buniam J, Merrell LH, Rogers L, Bradshaw L, Moreno-Cabañas A, Rogers PJ, Brunstrom JM, Hodson L, van Loon LJC, Barton W, O'Donovan C, Crispie F, O'Sullivan O, Cotter PD, Proctor K, Betts JA, Koumanov F, Thompson D, Gonzalez JT. Hengist A, et al. Among authors: o sullivan o, cotter pd. Cell Rep Med. 2024 Aug 20;5(8):101667. doi: 10.1016/j.xcrm.2024.101667. Epub 2024 Aug 5. Cell Rep Med. 2024. PMID: 39106867 Free PMC article. Clinical Trial.

81

Microbiome mapping in dairy industry reveals new species and genes for probiotic and bioprotective activities.

De Filippis F, Valentino V, Yap M, Cabrera-Rubio R, Barcenilla C, Carlino N, Cobo-Díaz JF, Quijada NM, Calvete-Torre I, Ruas-Madiedo P, Sabater C, Sequino G, Pasolli E, Wagner M, Margolles A, Segata N, Álvarez-Ordóñez A, Cotter PD, Ercolini D. De Filippis F, et al. Among authors: cotter pd. NPJ Biofilms Microbiomes. 2024 Aug 2;10(1):67. doi: 10.1038/s41522-024-00541-5. NPJ Biofilms Microbiomes. 2024. PMID: 39095404 Free PMC article.

82

Reply-Letter to the editor: Application of diversity research and probiotic intervention in gestational diabetes mellitus management.

Lan X, Li B, Zhao J, Stanton C, Ross RP, Chen W, Yang B. Lan X, et al. Among authors: stanton c. Clin Nutr. 2024 Sep;43(9):2071-2072. doi: 10.1016/j.clnu.2024.07.036. Epub 2024 Jul 26. Clin Nutr. 2024. PMID: 39088964 No abstract available.

83

Reply-Letter to the editor: Comment on: "Probiotic intervention improves metabolic outcomes in gestational diabetes mellitus: A meta-analysis of randomized controlled trials".

Lan X, Li B, Zhao J, Stanton C, Ross RP, Chen W, Yang B. Lan X, et al. Among authors: stanton c. Clin Nutr. 2024 Sep;43(9):2031-2032. doi: 10.1016/j.clnu.2024.07.035. Epub 2024 Jul 26. Clin Nutr. 2024. PMID: 39083987 No abstract available.

84

Unveiling metabolic pathways of selected plant-derived glycans by Bifidobacterium pseudocatenulatum.

Sanchez-Gallardo R, Bottacini F, Friess L, Esteban-Torres M, Somers C, Moore RL, McAuliffe FM, Cotter PD, van Sinderen D. Sanchez-Gallardo R, et al. Among authors: cotter pd. Front Microbiol. 2024 Jul 16;15:1414471. doi: 10.3389/fmicb.2024.1414471. eCollection 2024. Front Microbiol. 2024. PMID: 39081887 Free PMC article.

85

CD71 + erythroid cells promote intestinal symbiotic microbial communities in pregnancy and neonatal period.

Koleva P, He J, Dunsmore G, Bozorgmehr N, Lu J, Huynh M, Tollenaar S, Huang V, Walter J, Way SS, Elahi S. Koleva P, et al. Among authors: walter j. Microbiome. 2024 Jul 30;12(1):142. doi: 10.1186/s40168-024-01859-0. Microbiome. 2024. PMID: 39080725 Free PMC article.

86

Maternal high-fat diet-induced microbiota changes are associated with alterations in embryonic brain metabolites and adolescent behaviour.

Ratsika A, Codagnone MG, Bastiaanssen TFS, Hoffmann Sarda FA, Lynch CMK, Ventura-Silva AP, Rosell-Cardona C, Caputi V, Stanton C, Fülling C, Clarke G, Cryan JF. Ratsika A, et al. Among authors: stanton c. Brain Behav Immun. 2024 Oct;121:317-330. doi: 10.1016/j.bbi.2024.07.020. Epub 2024 Jul 18. Brain Behav Immun. 2024. PMID: 39032541 Free article.

87

The interplay between diet and the gut microbiome: implications for health and disease.

Ross FC, Patangia D, Grimaud G, Lavelle A, Dempsey EM, Ross RP, Stanton C. Ross FC, et al. Among authors: stanton c, dempsey em. Nat Rev Microbiol. 2024 Nov;22(11):671-686. doi: 10.1038/s41579-024-01068-4. Epub 2024 Jul 15. Nat Rev Microbiol. 2024. PMID: 39009882 Review.

88

Impact of previous pregnancy and BMI on cellular and serum immune activity from early to late pregnancy.

Mealy G, Brennan K, Killeen SL, Kilbane M, Yelverton C, Saldova R, Groeger D, VanSinderen D, Cotter PD, Doyle SL, McAuliffe FM. Mealy G, et al. Among authors: cotter pd. Sci Rep. 2024 Jul 11;14(1):16055. doi: 10.1038/s41598-024-66651-4. Sci Rep. 2024. PMID: 38992196 Free PMC article.

89

Gut microbiota signatures of vulnerability to food addiction in mice and humans.

Samulėnaitė S, García-Blanco A, Mayneris-Perxachs J, Domingo-Rodríguez L, Cabana-Domínguez J, Fernàndez-Castillo N, Gago-García E, Pineda-Cirera L, Burokas A, Espinosa-Carrasco J, Arboleya S, Latorre J, Stanton C, Hosomi K, Kunisawa J, Cormand B, Fernández-Real JM, Maldonado R, Martín-García E. Samulėnaitė S, et al. Among authors: stanton c. Gut. 2024 Oct 7;73(11):1799-1815. doi: 10.1136/gutjnl-2023-331445. Gut. 2024. PMID: 38926079 Free PMC article.

90

The changing landscape with respect to scientific research and education for second-level students and how they can overlap: the Kefir4All example.

Walsh LH, O' Mahony C, Cotter PD. Walsh LH, et al. Among authors: cotter pd. J Microbiol Biol Educ. 2024 Aug 29;25(2):e0005824. doi: 10.1128/jmbe.00058-24. Epub 2024 Jun 24. J Microbiol Biol Educ. 2024. PMID: 38912789 Free PMC article.

91

Interplay between microbial-derived GABA and host GABA receptor signaling collectively influence the tumorigenic function of GABA in colon cancer.

Keane JM, Fernandes P, Kratz F, O'Callaghan G, Gahan CGM, Joyce SA, Stanton C, Hyland NP, Houston A. Keane JM, et al. Among authors: stanton c. Pharmacol Res Perspect. 2024 Aug;12(4):e1226. doi: 10.1002/prp2.1226. Pharmacol Res Perspect. 2024. PMID: 38886975 Free PMC article.

92

Metagenomic analysis of the bacterial microbiome, resistome and virulome distinguishes Portuguese Serra da Estrela PDO cheeses from similar non-PDO cheeses: An exploratory approach.

Salamandane A, Leech J, Almeida R, Silva C, Crispie F, Cotter PD, Malfeito-Ferreira M, Brito L. Salamandane A, et al. Among authors: cotter pd. Food Res Int. 2024 Aug;189:114556. doi: 10.1016/j.foodres.2024.114556. Epub 2024 May 27. Food Res Int. 2024. PMID: 38876593 Free article.

93

Gut microbiome alterations at acute myeloid leukemia diagnosis are associated with muscle weakness and anorexia.

Pötgens SA, Havelange V, Lecop S, Li F, Neyrinck AM, Bindels F, Neveux N, Demoulin JB, Moors I, Kerre T, Maertens J, Walter J, Schoemans H, Delzenne NM, Bindels LB. Pötgens SA, et al. Among authors: walter j. Haematologica. 2024 Oct 1;109(10):3194-3208. doi: 10.3324/haematol.2023.284138. Haematologica. 2024. PMID: 38546675 Free PMC article.

94

Comprehensive insight into the alterations in the gut microbiome and the intestinal barrier as a consequence of iron deficiency anaemia.

Soriano-Lerma A, García-Burgos M, Barton W, Alférez MJM, Crespo-Pérez JV, Soriano M, López-Aliaga I, Cotter PD, García-Salcedo JA. Soriano-Lerma A, et al. Among authors: cotter pd. Biomed J. 2024 Dec;47(6):100701. doi: 10.1016/j.bj.2024.100701. Epub 2024 Jan 26. Biomed J. 2024. PMID: 38281699 Free PMC article.

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