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33 results
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Filters applied: . Clear all Quoted phrase not found in phrase index: "Yongqun He"
Page 1
Analyses of Brucella pathogenesis, host immunity, and vaccine targets using systems biology and bioinformatics.
He Y. He Y. Front Cell Infect Microbiol. 2012 Feb 1;2:2. doi: 10.3389/fcimb.2012.00002. eCollection 2012. Front Cell Infect Microbiol. 2012. PMID: 22919594 Free PMC article. Review.
Based on more than 30 sequenced Brucella genomes, comparative genomics is able to identify gene variations among Brucella strains that help to explain host specificity and virulence differences among Brucella species. ...The Vaxign reverse vaccinology has bee …
Based on more than 30 sequenced Brucella genomes, comparative genomics is able to identify gene variations among Brucella stra …
Vaccine Design by Reverse Vaccinology and Machine Learning.
Ong E, He Y. Ong E, et al. Among authors: he y. Methods Mol Biol. 2022;2414:1-16. doi: 10.1007/978-1-0716-1900-1_1. Methods Mol Biol. 2022. PMID: 34784028
Both Vaxign and Vaxign-ML have been applied to predict SARS-CoV-2 (cause of COVID-19) and Brucella vaccine antigens to demonstrate the integrative approach to analyze and select vaccine candidates using the Vaxign platform....
Both Vaxign and Vaxign-ML have been applied to predict SARS-CoV-2 (cause of COVID-19) and Brucella vaccine antigens to demonstrate th …
Ontology-based representation and analysis of host-Brucella interactions.
Lin Y, Xiang Z, He Y. Lin Y, et al. Among authors: he y. J Biomed Semantics. 2015 Oct 5;6:37. doi: 10.1186/s13326-015-0036-y. eCollection 2015. J Biomed Semantics. 2015. PMID: 26445639 Free PMC article.
RESULTS: Different levels of host-Brucella interactions based on different host cell types and Brucella strains were first defined ontologically. ...Two Brucella pathogenesis mechanisms were ontologically represented: Brucella Type IV secretion system …
RESULTS: Different levels of host-Brucella interactions based on different host cell types and Brucella strains were first def …
Literature Mining and Ontology based Analysis of Host-Brucella Gene-Gene Interaction Network.
Karadeniz İ, Hur J, He Y, Özgür A. Karadeniz İ, et al. Among authors: he y. Front Microbiol. 2015 Dec 9;6:1386. doi: 10.3389/fmicb.2015.01386. eCollection 2015. Front Microbiol. 2015. PMID: 26696993 Free PMC article.
The identification of host-Brucella interaction is crucial to understand host immunity against Brucella infection and Brucella pathogenesis against host immune responses. ...The gene-gene interactions here represent the interactions between genes and/or gene …
The identification of host-Brucella interaction is crucial to understand host immunity against Brucella infection and Bruce …
Ontology representation and analysis of vaccine formulation and administration and their effects on vaccine immune responses.
Lin Y, He Y. Lin Y, et al. Among authors: he y. J Biomed Semantics. 2012 Dec 20;3(1):17. doi: 10.1186/2041-1480-3-17. J Biomed Semantics. 2012. PMID: 23256535 Free PMC article.
Different use cases demonstrate how different vaccine formulations and routes of vaccine administration affect the protection efficacy, general immune responses, and adverse events following vaccination. For example, vaccinations of mice with Brucella abortus vaccine strai …
Different use cases demonstrate how different vaccine formulations and routes of vaccine administration affect the protection efficacy, gene …
Bioinformatics analysis of Brucella vaccines and vaccine targets using VIOLIN.
He Y, Xiang Z. He Y, et al. Immunome Res. 2010 Sep 27;6 Suppl 1(Suppl 1):S5. doi: 10.1186/1745-7580-6-S1-S5. Immunome Res. 2010. PMID: 20875156 Free PMC article.
To demonstrate the applicability of VIOLIN for vaccine research, VIOLIN was used for bioinformatics analysis of existing Brucella vaccines and prediction of new Brucella vaccine targets. RESULTS: VIOLIN contains many literature mining programs (e.g., Vaxmesh) …
To demonstrate the applicability of VIOLIN for vaccine research, VIOLIN was used for bioinformatics analysis of existing Brucella vac …
Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network.
Hur J, Xiang Z, Feldman EL, He Y. Hur J, et al. Among authors: he y. BMC Immunol. 2011 Aug 26;12:49. doi: 10.1186/1471-2172-12-49. BMC Immunol. 2011. PMID: 21871085 Free PMC article.
RESULTS: The VO-based SciMiner (VO-SciMiner) was developed to incorporate a total of 67 Brucella vaccine terms. A set of rules for term expansion of VO terms were learned from training data, consisting of 90 biomedical articles related to Brucella vaccine terms. ... …
RESULTS: The VO-based SciMiner (VO-SciMiner) was developed to incorporate a total of 67 Brucella vaccine terms. A set of rules for te …
Microbial modulation of host apoptosis and pyroptosis.
He Y, Amer AO. He Y, et al. Front Cell Infect Microbiol. 2014 Jun 19;4:83. doi: 10.3389/fcimb.2014.00083. eCollection 2014. Front Cell Infect Microbiol. 2014. PMID: 24995165 Free PMC article. No abstract available.
33 results