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Page 1
Bacillus-infecting bacteriophage Izhevsk harbors thermostable endolysin with broad range specificity.
Skorynina AV, Piligrimova EG, Kazantseva OA, Kulyabin VA, Baicher SD, Ryabova NA, Shadrin AM. Skorynina AV, et al. PLoS One. 2020 Nov 24;15(11):e0242657. doi: 10.1371/journal.pone.0242657. eCollection 2020. PLoS One. 2020. PMID: 33232350 Free PMC article.
Transmission electron microscopy, genome sequencing and comparative analyses revealed that Izhevsk is a temperate phage with Siphoviridae morphology and belongs to the same genus as the previously described but taxonomically unclassified bacteriophages Tsamsa and Di …
Transmission electron microscopy, genome sequencing and comparative analyses revealed that Izhevsk is a temperate phage with Siphoviridae mo …
Biodiversity and classification of lactococcal phages.
Deveau H, Labrie SJ, Chopin MC, Moineau S. Deveau H, et al. Appl Environ Microbiol. 2006 Jun;72(6):4338-46. doi: 10.1128/AEM.02517-05. Appl Environ Microbiol. 2006. PMID: 16751549 Free PMC article.
For this study, an in-depth review of the classification of Lactococcus lactis phages was performed. Reference phages as well as unclassified phages from international collections were analyzed by stringent DNA-DNA hybridization studies, electron microscopy observat …
For this study, an in-depth review of the classification of Lactococcus lactis phages was performed. Reference phages as well as unclassi …
Genome sequence of the novel freshwater Microcystis cyanophage Mwe-Yong1112-1.
Cai R, Li D, Lin W, Qin W, Pan L, Wang F, Qian M, Liu W, Zhou Q, Zhou C, Tong Y. Cai R, et al. Arch Virol. 2022 Nov;167(11):2371-2376. doi: 10.1007/s00705-022-05542-3. Epub 2022 Jul 20. Arch Virol. 2022. PMID: 35857150
In a proteomic tree, Mwe-Yong1112-1 and three unclassified phages formed a monophyletic clade between the families Saparoviridae and Pyrstoviridae, but Mwe-Yong1112-1 occupied a separate branch from the other three phages, suggesting that it represents a new evoluti …
In a proteomic tree, Mwe-Yong1112-1 and three unclassified phages formed a monophyletic clade between the families Saparovirid …
Automated classification of tailed bacteriophages according to their neck organization.
Lopes A, Tavares P, Petit MA, Guérois R, Zinn-Justin S. Lopes A, et al. BMC Genomics. 2014 Nov 27;15(1):1027. doi: 10.1186/1471-2164-15-1027. BMC Genomics. 2014. PMID: 25428721 Free PMC article.
This server was tested against 624 new phages from the NCBI database. 93% of the tailed and unclassified phages could be assigned to our head-neck-tail based categories, thus highlighting the large representativeness of the identified virion architectures. ...
This server was tested against 624 new phages from the NCBI database. 93% of the tailed and unclassified phages could be assig …
Characterization and Genomic Analysis of ValSw3-3, a New Siphoviridae Bacteriophage Infecting Vibrio alginolyticus.
Chen L, Liu Q, Fan J, Yan T, Zhang H, Yang J, Deng D, Liu C, Wei T, Ma Y. Chen L, et al. J Virol. 2020 May 4;94(10):e00066-20. doi: 10.1128/JVI.00066-20. Print 2020 May 4. J Virol. 2020. PMID: 32132234 Free PMC article.
Moreover, genome sequence alignments, phylogenetic analysis, in silico proteomic comparison, and core gene analysis all support that this novel phage, ValSw3-3, and five unclassified phages form a clade distant from those of other known genera ratified by the ICTV. …
Moreover, genome sequence alignments, phylogenetic analysis, in silico proteomic comparison, and core gene analysis all support that this no …
Duck gut viral metagenome analysis captures snapshot of viral diversity.
Fawaz M, Vijayakumar P, Mishra A, Gandhale PN, Dutta R, Kamble NM, Sudhakar SB, Roychoudhary P, Kumar H, Kulkarni DD, Raut AA. Fawaz M, et al. Gut Pathog. 2016 Jun 9;8:30. doi: 10.1186/s13099-016-0113-5. eCollection 2016. Gut Pathog. 2016. PMID: 27284287 Free PMC article.
Numerous duck virome sequences were homologous to the animal virus of the Papillomaviridae family; and phages of the Caudovirales, Inoviridae, Tectiviridae, Microviridae families and unclassified phages. Further, several duck virome sequences had homologous with the …
Numerous duck virome sequences were homologous to the animal virus of the Papillomaviridae family; and phages of the Caudovirales, Inovirida …
Insights into the phage community structure and potential function in silage fermentation.
Wang Y, Gao Y, Wang X, Lin Y, Xu G, Yang F, Ni K. Wang Y, et al. J Environ Manage. 2024 May;358:120837. doi: 10.1016/j.jenvman.2024.120837. Epub 2024 Apr 9. J Environ Manage. 2024. PMID: 38593737
Our findings indicated a high prevalence of annotated phages belonging to Caudovirales and Geplafuvirales, as well as unclassified phages in silage. The predominant host types for these phages were Campylobacterales and Enterobacterales. ...
Our findings indicated a high prevalence of annotated phages belonging to Caudovirales and Geplafuvirales, as well as unclassified …
Infection Kinetics and Phylogenetic Analysis of vB_EcoD_SU57, a Virulent T1-Like Drexlerviridae Coliphage.
Koonjan S, Seijsing F, Cooper CJ, Nilsson AS. Koonjan S, et al. Front Microbiol. 2020 Nov 16;11:565556. doi: 10.3389/fmicb.2020.565556. eCollection 2020. Front Microbiol. 2020. PMID: 33329423 Free PMC article.
Phylogenetic analyses showed that vB_EcoD_SU57 is a Braunvirinae phage of the newly formed Drexlerviridae family and closely related to T1-like E. coli phages vB_EcoS_ACG-M12 (Guelphvirus) and Rtp (Rtpvirus) as well as the unclassified phages vB_EcoS_CEB_EC3a and EC …
Phylogenetic analyses showed that vB_EcoD_SU57 is a Braunvirinae phage of the newly formed Drexlerviridae family and closely related to T1-l …
Virome analysis for identification of novel mammalian viruses in bat species from Chinese provinces.
Wu Z, Ren X, Yang L, Hu Y, Yang J, He G, Zhang J, Dong J, Sun L, Du J, Liu L, Xue Y, Wang J, Yang F, Zhang S, Jin Q. Wu Z, et al. J Virol. 2012 Oct;86(20):10999-1012. doi: 10.1128/JVI.01394-12. Epub 2012 Aug 1. J Virol. 2012. PMID: 22855479 Free PMC article.
The mammalian viruses included those of the Adenoviridae, Herpesviridae, Papillomaviridae, Retroviridae, Circoviridae, Rhabdoviridae, Astroviridae, Flaviridae, Coronaviridae, Picornaviridae, and Parvovirinae; insect viruses included those of the Baculoviridae, Iflaviridae, Dicist …
The mammalian viruses included those of the Adenoviridae, Herpesviridae, Papillomaviridae, Retroviridae, Circoviridae, Rhabdoviridae, Astrov …
The Gut Viral Metagenome Analysis of Domestic Dogs Captures Snapshot of Viral Diversity and Potential Risk of Coronavirus.
Shi Y, Tao J, Li B, Shen X, Cheng J, Liu H. Shi Y, et al. Front Vet Sci. 2021 Jul 7;8:695088. doi: 10.3389/fvets.2021.695088. eCollection 2021. Front Vet Sci. 2021. PMID: 34307533 Free PMC article.
.; and phage families of Microviridae, Siphoviridae, Ackermannviridae, Podoviridae, Myoviridae and the unclassified phages. Further, several sequences were homologous with the insect and plant viruses, which reflects the diet and habitation of dogs. ...
.; and phage families of Microviridae, Siphoviridae, Ackermannviridae, Podoviridae, Myoviridae and the unclassified phages. Fu …
15 results