Chromatin-bound CRM1 recruits SET-Nup214 and NPM1c onto HOX clusters causing aberrant HOX expression in leukemia cells

Elife. 2019 Nov 22:8:e46667. doi: 10.7554/eLife.46667.

Abstract

We previously demonstrated that CRM1, a major nuclear export factor, accumulates at Hox cluster regions to recruit nucleoporin-fusion protein Nup98HoxA9, resulting in robust activation of Hox genes (Oka et al., 2016). However, whether this phenomenon is general to other leukemogenic proteins remains unknown. Here, we show that two other leukemogenic proteins, nucleoporin-fusion SET-Nup214 and the NPM1 mutant, NPM1c, which contains a nuclear export signal (NES) at its C-terminus and is one of the most frequent mutations in acute myeloid leukemia, are recruited to the HOX cluster region via chromatin-bound CRM1, leading to HOX gene activation in human leukemia cells. Furthermore, we demonstrate that this mechanism is highly sensitive to a CRM1 inhibitor in leukemia cell line. Together, these findings indicate that CRM1 acts as a key molecule that connects leukemogenic proteins to aberrant HOX gene regulation either via nucleoporin-CRM1 interaction (for SET-Nup214) or NES-CRM1 interaction (for NPM1c).

Keywords: CRM1; HOX cluster; NPM1c; SET-Nup214; cell biology; chromosomes; gene expression; human; leukemia; nucleoporin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus / genetics
  • Cell Line, Tumor
  • Cell Nucleus / genetics
  • Chromatin / genetics
  • Cytoplasm / genetics
  • DNA-Binding Proteins / genetics
  • Exportin 1 Protein
  • Gene Expression Regulation, Leukemic / genetics
  • Histone Chaperones / genetics
  • Homeodomain Proteins / genetics
  • Humans
  • Karyopherins / genetics*
  • Leukemia, Myeloid, Acute / genetics*
  • Leukemia, Myeloid, Acute / pathology
  • Mutation / genetics
  • Nuclear Export Signals / genetics
  • Nuclear Pore Complex Proteins / genetics*
  • Nuclear Proteins / genetics*
  • Nucleophosmin
  • Receptors, Cytoplasmic and Nuclear / genetics*

Substances

  • Chromatin
  • DNA-Binding Proteins
  • Histone Chaperones
  • Homeodomain Proteins
  • Karyopherins
  • NPM1 protein, human
  • NUP214 protein, human
  • Nuclear Export Signals
  • Nuclear Pore Complex Proteins
  • Nuclear Proteins
  • Receptors, Cytoplasmic and Nuclear
  • SET protein, human
  • Nucleophosmin

Associated data

  • GEO/GSE127983