Halophytophthora fluviatilis sp. nov. from freshwater in Virginia

FEMS Microbiol Lett. 2014 Mar;352(2):230-7. doi: 10.1111/1574-6968.12391. Epub 2014 Feb 13.

Abstract

Halophytophthora fluviatilis, a novel species from inland freshwater in Virginia, is characterized and described in this study. This homothallic species produced ovoid to globose sporangia, which release zoospores directly through exit pores. It grew well in a relatively wide range of salinity from 1.8 to 19.0 parts per thousand. Sequence analysis of the rRNA internal transcribed spacer region placed this new species in the Halophytophthora sensu stricto clade. Description of this new species expanded the habitat to include geographically distinct inland freshwater ecosystems for the genus Halophytophthora, challenging the notion that this genus is marine or brackish. The need to construct a molecular-based taxonomy for the genus Halophytophthora is also discussed.

Keywords: Freshwater; Halophytophthora fluviatilis; ITS.

Publication types

  • Letter
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Cluster Analysis
  • DNA, Ribosomal Spacer / chemistry
  • DNA, Ribosomal Spacer / genetics
  • Fresh Water / microbiology*
  • Microscopy
  • Molecular Sequence Data
  • Oomycetes / classification*
  • Oomycetes / cytology
  • Oomycetes / genetics
  • Oomycetes / isolation & purification*
  • Phylogeny
  • Sequence Analysis, DNA
  • Virginia

Substances

  • DNA, Ribosomal Spacer

Associated data

  • GENBANK/HQ643147
  • GENBANK/KF734963
  • GENBANK/KF734964
  • GENBANK/KF734965
  • GENBANK/KF734966
  • GENBANK/KF734967
  • GENBANK/KF734968